prot_P-wetherbeei_contig732.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig732.4.1
Unique Nameprot_P-wetherbeei_contig732.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length302
Homology
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A835YWK2_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWK2_9STRA)

HSP 1 Score: 302 bits (774), Expect = 1.550e-100
Identity = 139/197 (70.56%), Postives = 159/197 (80.71%), Query Frame = 0
Query:   58 GGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERLARK 254
            GGA HLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKP FSQTLLL HMYQ+P SA++AAGGDP+ ++++   D            L KFG ++EM+VCDNLGDHLVGN+YIKFSDEEDA  ALKGL+GRWY GRP+V EFS V DFREAR      CRQYDEGTC RGG CNFMHVR +SK V+R+L+++ARK
Sbjct:   20 GGAEHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPPFSQTLLLSHMYQNPASALLAAGGDPNAIDQDAANDEFEDFYEEVYEELCKFGSVEEMHVCDNLGDHLVGNVYIKFSDEEDADAALKGLFGRWYGGRPMVPEFSPVNDFREAR------CRQYDEGTCGRGGQCNFMHVRHVSKDVVRYLDKVARK 210          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A835ZC00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC00_9STRA)

HSP 1 Score: 301 bits (771), Expect = 1.810e-98
Identity = 137/200 (68.50%), Postives = 159/200 (79.50%), Query Frame = 0
Query:   59 GAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERLARKRARG 258
            GA HLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKP FSQT+LL HM+Q+P SA++AAGG+P  +++E   D            L KFG ++EMNVCDNLGDHLVGN+Y+KFSDEEDA  ALKGL+GRWYAGRP+V EFS VTDFREAR      CRQYDEGTC RGG CNFMHVR +S+ V R+ +++AR+  RG
Sbjct:   62 GAEHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPPFSQTILLSHMFQNPASALIAAGGNPETIDQEATNDEFEDFYEEVYEELCKFGTVEEMNVCDNLGDHLVGNVYVKFSDEEDADNALKGLFGRWYAGRPMVPEFSPVTDFREAR------CRQYDEGTCGRGGQCNFMHVRHVSRDVARYCDKMARRARRG 255          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: D7G5I7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5I7_ECTSI)

HSP 1 Score: 300 bits (767), Expect = 6.730e-96
Identity = 146/208 (70.19%), Postives = 169/208 (81.25%), Query Frame = 0
Query:   49 RDDDGPFGS--GGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERLARK 254
            RD +G  GS  GGA HLARIHGTEEDKVNCPF+YKIGACRHGDRCSRQHHKP FSQT+L+Q++YQ+P SAV+AAGGDPSQL ++ ++D    XXXX    LSKFG I EMNVCDNLGDHL+GN+Y+KF DEEDA  ALKGL GRWYA RPI+ EFS VTDFREAR      CRQ+DEGTCNRGG CNFMHV+ + + V+ +LE+L RK
Sbjct:   48 RDRNGMSGSARGGAEHLARIHGTEEDKVNCPFFYKIGACRHGDRCSRQHHKPPFSQTILVQNLYQNPVSAVMAAGGDPSQLPKDHVQDDFEDXXXXVYQELSKFGEISEMNVCDNLGDHLIGNVYVKFLDEEDADSALKGLMGRWYASRPIMCEFSPVTDFREAR------CRQFDEGTCNRGGQCNFMHVKPVPRLVMSYLEKLLRK 249          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A7S3XMX4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMX4_HETAK)

HSP 1 Score: 282 bits (722), Expect = 2.570e-92
Identity = 129/202 (63.86%), Postives = 157/202 (77.72%), Query Frame = 0
Query:   58 GGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLR-FLERLARKRARG 258
            GGA HLARIHGTEEDKVNCPFY+KIGACRHGDRCSRQHHKP FSQT+L+QHMYQ+P SA+ AAGGDP+ ++  + ++            LSKFG ++E+N+CDNLGDHLVGN+Y K++DEEDA  ALK LYGR+YAGRP++ EFS VTDFREAR      CRQ+DEGTC RGG+CNFMHV+ + + + R  L + A KR  G
Sbjct:   22 GGAEHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTVLVQHMYQNPASAIAAAGGDPNSIDHRQAQEDFEEFYEEVFEELSKFGAVEELNICDNLGDHLVGNVYAKYADEEDADSALKALYGRFYAGRPLICEFSPVTDFREAR------CRQFDEGTCARGGYCNFMHVKAVPRGLQRDLLRKFAPKRGGG 217          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: F0W2M2_9STRA (Splicing factor U2AF 35 kDa subunit putative n=2 Tax=Albugo TaxID=65356 RepID=F0W2M2_9STRA)

HSP 1 Score: 279 bits (713), Expect = 1.490e-89
Identity = 125/198 (63.13%), Postives = 156/198 (78.79%), Query Frame = 0
Query:   54 PFGSGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERL 251
            P   GGA HLARIHGTEED+VNCPFY+KIGACRHGDRCSR H+KP FSQT+L+ HMYQ+P S ++A  GDPS L+++++++            L KFG+++E+N+CDNLGDHLVGN+Y+K+ DEE A  A K LYGR+YAGRP+V EFS VTDFREAR      CRQ+DEGTCNRGG+CNFMHV+ +S+S+ R LERL
Sbjct:   45 PTTGGGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPLSQIIAQNGDPSGLDQKKVDEDFEDFYEEVFEELCKFGKVEELNICDNLGDHLVGNVYVKYEDEEHAAAAQKSLYGRFYAGRPLVCEFSPVTDFREAR------CRQFDEGTCNRGGYCNFMHVKTVSRSMQRELERL 236          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: F0Y2V2_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2V2_AURAN)

HSP 1 Score: 272 bits (696), Expect = 4.570e-89
Identity = 122/191 (63.87%), Postives = 151/191 (79.06%), Query Frame = 0
Query:   60 AAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLER 250
            A HLARIHGTEEDKVNCPFY+KIGACRHGDRCSRQHHKP FSQT+++QHMYQ+P S + AAGGDPSQL+ +++++            L+K+G I+E+NVC+NLGDH+VGN+Y KF+DEE    +LK L+GR+YAGRP+V EFS VTDFREAR      CRQYDE  C RGG+CNFMH+R  S+S+ R LE+
Sbjct:    1 ATHLARIHGTEEDKVNCPFYFKIGACRHGDRCSRQHHKPPFSQTMIVQHMYQNPASQIAAAGGDPSQLDPKKVQEEFDDFYEEVYDELAKYGEIEELNVCENLGDHMVGNVYAKFADEEHTDASLKALFGRFYAGRPLVCEFSPVTDFREAR------CRQYDEAVCTRGGYCNFMHIRTPSRSLRRDLEK 185          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: T0S0M7_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0S0M7_SAPDV)

HSP 1 Score: 276 bits (705), Expect = 5.470e-89
Identity = 124/197 (62.94%), Postives = 154/197 (78.17%), Query Frame = 0
Query:   54 PFGSGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLER 250
            P   GGA HLARIHGTEED+VNCPFY+KIGACRHGDRCSR H+KP FSQT+L++HMYQ+P S ++AA GDPSQL+++ +++            L KFG++DE+NVCDNLGDHLVGN+Y KF DEE A  A K LYGR+Y GRP++ EFS VTDFREAR      CRQ+DEGTCNRGG+CNFMH++ +S +++  LER
Sbjct:   47 PGVGGGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVKHMYQNPLSVIIAANGDPSQLDQKTVDEDFEDFFEEVYEELCKFGKVDELNVCDNLGDHLVGNVYAKFDDEECAAAAQKALYGRFYGGRPLICEFSPVTDFREAR------CRQFDEGTCNRGGYCNFMHIKMVSHAMMIELER 237          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A8K1CHU8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHU8_PYTOL)

HSP 1 Score: 276 bits (705), Expect = 6.440e-89
Identity = 123/194 (63.40%), Postives = 152/194 (78.35%), Query Frame = 0
Query:   58 GGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERL 251
            GGA HLARIHGTEED+VNCPFY+KIGACRHGDRCSR H+KP FSQT+L+ HMYQ+P S ++A  GDP+ L+ ++ E+            L KFG+++E+N+CDNLGDHLVGN+Y K+ DEEDA  A K LYGR+YAGRP+V EFS VTDFREAR      CRQ+DEGTCNRGG+CNFMH+R ++ S+ R LER+
Sbjct:   53 GGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRLHNKPVFSQTILVSHMYQNPLSQIIAQNGDPTHLDRKQAEEDFEDFYEEVFEELCKFGKLEELNICDNLGDHLVGNVYAKYEDEEDAAAAQKALYGRFYAGRPLVCEFSPVTDFREAR------CRQFDEGTCNRGGYCNFMHIRTVAPSMQRELERI 240          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A024TD10_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024TD10_9STRA)

HSP 1 Score: 273 bits (699), Expect = 2.010e-88
Identity = 125/202 (61.88%), Postives = 156/202 (77.23%), Query Frame = 0
Query:   49 RDDDGPFGSGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLER 250
            RD  G    GGA HLARIHGTEED+VNCPFY+KIGACRHGDRCSR H+KP FSQTLL++HMYQ+P S V+AA GDP+QL+++ +++            L KFG+++E+NVCDNLGDHLVGN+Y KF DEE A  A   LYGR+Y GRPI+ E+S VTDFREAR      CRQ+DEGTCNRGG+CNFMH++ +S++++  LER
Sbjct:   27 RDRRGDATGGGAEHLARIHGTEEDRVNCPFYFKIGACRHGDRCSRSHNKPVFSQTLLVKHMYQNPLSTVIAANGDPNQLDQKTVDEDFEDFFEEVFEELCKFGKLEELNVCDNLGDHLVGNVYAKFEDEECAAAAHTALYGRFYGGRPIMCEYSPVTDFREAR------CRQFDEGTCNRGGYCNFMHIKMVSRAMMIELER 222          
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Match: A0A7S2C7Z9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C7Z9_9STRA)

HSP 1 Score: 273 bits (698), Expect = 2.260e-88
Identity = 121/201 (60.20%), Postives = 162/201 (80.60%), Query Frame = 0
Query:   57 SGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAFSQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDXXXXXXXXXXXXLSKFGRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAEFSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLERLARKRAR 257
            SGGAAHLARIHGTEED+VNCPFY+KIG+CRHG+RCSRQHHKP FSQT+L++HM+Q+P SA +A GGDP+Q++E+++++            L+ +G ++E NVC+NLGDH+VGN+Y+KF DEEDA +ALK L+GR+YAGRP+V EFS VTDFREAR      CRQ+DE +C RGG+CNFMH++  S+S+ R L++   K++R
Sbjct:   25 SGGAAHLARIHGTEEDRVNCPFYFKIGSCRHGERCSRQHHKPPFSQTVLVKHMWQNPVSAHIAQGGDPAQIDEKDVQEKFDEFFEEIYEELASYGTVEECNVCENLGDHMVGNVYVKFEDEEDADDALKALFGRFYAGRPLVVEFSPVTDFREAR------CRQFDEASCARGGYCNFMHIKSPSRSLQRQLDKQYAKKSR 219          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig732.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWK2_9STRA1.550e-10070.56Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835ZC00_9STRA1.810e-9868.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G5I7_ECTSI6.730e-9670.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3XMX4_HETAK2.570e-9263.86Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0W2M2_9STRA1.490e-8963.13Splicing factor U2AF 35 kDa subunit putative n=2 T... [more]
F0Y2V2_AURAN4.570e-8963.87Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
T0S0M7_SAPDV5.470e-8962.94Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A8K1CHU8_PYTOL6.440e-8963.40Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024TD10_9STRA2.010e-8861.88Uncharacterized protein n=7 Tax=Aphanomyces TaxID=... [more]
A0A7S2C7Z9_9STRA2.260e-8860.20Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009145U2 auxiliary factor small subunitPRINTSPR01848U2AUXFACTORcoord: 76..95
score: 80.23
coord: 95..115
score: 44.16
coord: 133..148
score: 46.88
coord: 161..183
score: 52.96
coord: 188..212
score: 55.64
IPR009145U2 auxiliary factor small subunitPANTHERPTHR12620U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNITcoord: 61..297
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 127..200
e-value: 6.3E-9
score: 45.7
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 214..238
e-value: 0.62
score: 17.9
coord: 71..97
e-value: 0.35
score: 19.9
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 216..237
e-value: 2.1E-5
score: 24.3
coord: 73..96
e-value: 1.6E-5
score: 24.7
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 217..239
score: 11.901249
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 70..98
score: 12.267424
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 101..203
e-value: 1.3E-29
score: 104.5
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 141..197
e-value: 1.0E-5
score: 25.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 116..204
score: 12.065728
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 257..302
NoneNo IPR availablePANTHERPTHR12620:SF8U2 SMALL NUCLEAR RNA AUXILIARY FACTOR 1coord: 61..297
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 136..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig732contigP-wetherbeei_contig732:6053..8910 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig732.4.1mRNA_P-wetherbeei_contig732.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig732 6053..8910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig732.4.1 ID=prot_P-wetherbeei_contig732.4.1|Name=mRNA_P-wetherbeei_contig732.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=302bp
MSYYGKGGGDRRGGDSYGGSRGGGGYGGGGGGFGGGGFGGGRGGGRRGRD
DDGPFGSGGAAHLARIHGTEEDKVNCPFYYKIGACRHGDRCSRQHHKPAF
SQTLLLQHMYQSPTSAVVAAGGDPSQLNEEELEDQFEDFYEEVYEELSKF
GRIDEMNVCDNLGDHLVGNIYIKFSDEEDAGEALKGLYGRWYAGRPIVAE
FSNVTDFREARRVCNRECRQYDEGTCNRGGHCNFMHVRRISKSVLRFLER
LARKRARGEPVNEPSREERRRRSSRSTSRPRDRDRGGRDRDRDRDRDRDR
DR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009145U2AF_small
IPR003954RRM_dom_euk
IPR000571Znf_CCCH
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR035979RBD_domain_sf