prot_P-wetherbeei_contig7276.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7276.2.1
Unique Nameprot_P-wetherbeei_contig7276.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length320
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7276.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 183..199
e-value: 3.3E-4
score: 30.0
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 183..199
e-value: 1.2E-5
score: 25.2
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 183..199
score: 10.361479
NoneNo IPR availableGENE3D4.10.60.10coord: 157..211
e-value: 4.5E-7
score: 31.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 158..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..181
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 165..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7276contigP-wetherbeei_contig7276:1484..2443 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7276.2.1mRNA_P-wetherbeei_contig7276.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7276 1484..2466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7276.2.1 ID=prot_P-wetherbeei_contig7276.2.1|Name=mRNA_P-wetherbeei_contig7276.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=320bp
MRKQLSHQGIGNSEDPEMYFAGIEDMRAELADAGDPVSDEALKRLIVSNL
SGKYEIVQQTLLLGMTPYTLAELKDKIRACHQASLLKKHAVDASVNYSGY
SGGGGGSGRNNSGRRQGRPNRWFTGGRGGGDSGDGGNSRGGQQDRGQRDG
GNYHQRFGRAQQPAQHSSQERSRQDNGGGKGPRCYECNEMGHIKRNCPKR
GAGGATRSSARANQATEQPLHMHRVLVAERGPCRPSWLPGAGCNRSSARK
KGLWQGRGENHVNFIVDSGAAHTMVNDIGLLTNLKVCSHDIRGVGDTQFF
AKLSGDFSGNIFTSDGRRLK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf