prot_P-wetherbeei_contig7271.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7271.1.1
Unique Nameprot_P-wetherbeei_contig7271.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length188
Homology
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A6H5JBL3_9PHAE (DNA-directed DNA polymerase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL3_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 1.580e-50
Identity = 95/187 (50.80%), Postives = 127/187 (67.91%), Query Frame = 0
Query:    1 MGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEIN-SLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQMRVVLNRTTD 186
            MG+ Q A+KL I E QA G++ +F+ +FPG+  FM  TRR ARE G   T+TGR RHLPEIN S + + +AQAERQAVNSV+QGTAAD++K AM    RRL AW+     R   G   PR+++QIHDEL+ E P  E+D+ +L+ LL +CME +    LG++ P+ + M VGMSWG MR V++   D
Sbjct:   79 MGTPQVAKKLEITESQAQGLVRSFLKAFPGIEPFMAATRRFARENGYVCTLTGRRRHLPEINNSRNAAAKAQAERQAVNSVVQGTAADIMKTAMVLVARRLDAWRS----RLDEGLDCPRLIMQIHDELVLECPACEEDLEKLKGLLADCMEVEAPAVLGIKCPLTVNMLVGMSWGSMRRVVSHDED 261          
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: D7FK42_ECTSI (DNA-directed DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK42_ECTSI)

HSP 1 Score: 165 bits (417), Expect = 9.700e-44
Identity = 95/200 (47.50%), Postives = 126/200 (63.00%), Query Frame = 0
Query:    1 MGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQ-------------ARETGMARTITGRIRHLPEIN-SLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQMRVVLNRTTD 186
            MG+ Q A+KL I E QA G++ +F+ +FPG+  FM  TRR              ARE G   T+TGR RHLPEIN S + + +AQAERQAVNSV+QGTAAD++K AM    RRL AW+         G   PR+++QIHDEL+ E P  E+D+ RL+ LL +CME +    LG++ P+ + M VGMSWG MR V++   D
Sbjct: 1019 MGTPQVAKKLEITESQAQGLVRSFLKAFPGIEPFMAATRRYGTPCRHQISQRRFARENGYVCTLTGRRRHLPEINNSRNAAAKAQAERQAVNSVVQGTAADIMKTAMVLVARRLDAWRSSLDE----GLDCPRLIMQIHDELVLECPACEEDLERLKGLLADCMEVEAPAVLGIKCPLTVNMLVGMSWGSMRRVVSHDED 1214          
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A6V2EN94_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2EN94_9STRA)

HSP 1 Score: 145 bits (367), Expect = 5.000e-37
Identity = 82/180 (45.56%), Postives = 115/180 (63.89%), Query Frame = 0
Query:    1 MGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQMRVV 180
            MG  Q A+KL +    A     +F   F GV  +ME+T+  AR+     TI GR R+L +INS D + +AQAERQAVN++IQG+AAD+IKLAM  T  RL+ W +E    G    A PR+LLQIHDEL+FEV  +E D+ +L++++ +C   + V E  L+VP+ +K + G+SWG M  V
Sbjct:  947 MGVPQVAKKLSVTRSTAQNFFTSFYRRFHGVRQWMEQTKDFARQNCFVTTIAGRRRYLDDINSTDTAKKAQAERQAVNTIIQGSAADLIKLAMLKTASRLMDWHKEVIEAGGTNIA-PRLLLQIHDELLFEVMANETDVSKLKDIVTQCCGEECVEEFKLKVPLSLKCTCGISWGLMNEV 1125          
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A7S3V8E1_9STRA (DNA-directed DNA polymerase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V8E1_9STRA)

HSP 1 Score: 143 bits (361), Expect = 3.270e-36
Identity = 76/178 (42.70%), Postives = 114/178 (64.04%), Query Frame = 0
Query:    1 MGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQMR 178
            MG    A++LG+ +  A     +F   FP V  +M++T   AR      TI+GR R+L  I + D++LR+QAERQA+N++IQG+AAD++KLAM     R+  W++ER   G +    PRMLLQIHDEL+FE+  ++ D+ RLR ++  C   + V E  L+VP+++K S+G SWG M+
Sbjct: 1199 MGINSVAKQLGVNKESAKSFFRSFYGRFPDVKRWMDQTISSARTNKYVTTISGRRRYLDNITNEDRALRSQAERQAINTIIQGSAADLMKLAMLKMASRITDWRKERTGNGESN-TPPRMLLQIHDELLFEIVANQADVDRLRSVVTRCCTEECVEEFRLKVPLKLKCSIGTSWGSMK 1375          
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A7R9VQU8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VQU8_9STRA)

HSP 1 Score: 137 bits (345), Expect = 6.720e-35
Identity = 78/181 (43.09%), Postives = 112/181 (61.88%), Query Frame = 0
Query:    1 MGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAG----GAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQM 177
            MG  Q A+KL +    A   +  F   F GVS ++E T+  AR      TI+GR R+L +I S D+  RAQAERQAVN++IQG+AAD++KLAM   + R++ W++      A G    G+ PR+LLQIHDEL+FE   +E D+ RLR+ +  C   + VRE  L+V + + + +G+SWG M
Sbjct:  309 MGVPQVAKKLSVSRSTAQNFLNTFFRRFQGVSRWIEATKDFARRHQFVTTISGRRRYLDDICSGDKGKRAQAERQAVNTIIQGSAADIMKLAMLKMSARIMDWKK------AEGLDSLGSAPRILLQIHDELLFETDANESDVKRLRDAIMRCCADECVREFDLKVQLTMTLRIGISWGSM 483          
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A7S2LIW8_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LIW8_9STRA)

HSP 1 Score: 137 bits (345), Expect = 1.670e-34
Identity = 78/175 (44.57%), Postives = 108/175 (61.71%), Query Frame = 0
Query:    1 MGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWG 175
            MG  Q ++KLGI   +A     +F   F     +++ T+  A++ G   TI GR R+L EI S D + RAQAERQAVNSVIQG+AAD++KLAM     R+  W +E    G  G   PRMLLQIHDEL+FE+  ++ DI RL++ +  C   +   +L L+VP+++  SVG SWG
Sbjct:  397 MGISQVSKKLGINRSKAQHFFNSFFARFKQTRRWIDMTKESAKKLGFVTTIVGRRRYLDEIRSNDSAKRAQAERQAVNSVIQGSAADLMKLAMLKIGSRITDWHKEGHSAGGTG-RHPRMLLQIHDELLFEIANNKDDIQRLKDAIICCCAEECELDLKLKVPLKVNCSVGSSWG 570          
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A7S4JPM5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JPM5_9STRA)

HSP 1 Score: 136 bits (342), Expect = 1.140e-33
Identity = 78/179 (43.58%), Postives = 111/179 (62.01%), Query Frame = 0
Query:    1 MGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAV--PRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQM 177
            MG  Q A+KL +    A   + +F   F GV  ++E T+  AR      TI+GR R+L +I S D   RAQAERQAVN++IQG+AAD++KLAM   + R++ W++E     + GG+V  P +LLQIHDEL+FE   +E D+  LR+ +  C   + VRE  L+V +++K   GMSWG M
Sbjct:  947 MGVTQVAKKLNVNRSTAQKFLNSFFRRFQGVRRWIEATKEFARRHQFVTTISGRRRYLDDICSSDNGKRAQAERQAVNTIIQGSAADIMKLAMLKMSSRIMDWKKECL--DSPGGSVVPPMILLQIHDELLFETNANEIDVKMLRDAIMRCCAEECVREFNLKVQLKLKCMYGMSWGSM 1123          
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A7S2WU15_9STRA (DNA-directed DNA polymerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WU15_9STRA)

HSP 1 Score: 125 bits (315), Expect = 2.630e-31
Identity = 74/178 (41.57%), Postives = 106/178 (59.55%), Query Frame = 0
Query:    1 MGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRL-LAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQM 177
            MG  + A++ GI + +A     +F   F GV A+  R + Q    G   T+T R R +      D   RA+AERQAVNS IQG+A+D++KLAM A +R+L  AW+  +          PRM+LQ+HDELIF+VP + + +  L+ L+R CM A V ++L L VP+ +KM VG +WG M
Sbjct:  198 MGDKELAKRHGISQAKAESFKQSFFREFQGVGAWRNRIKAQVHTDGFVSTVTRRRREVKTCGPNDWQGRARAERQAVNSTIQGSASDMMKLAMVAIHRQLPAAWKDLKL-------PPPRMILQVHDELIFDVPATLEAVQTLKSLVRSCMVAHVSQQLQLNVPLDVKMCVGTTWGTM 368          
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: A0A7S2LVN7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LVN7_9STRA)

HSP 1 Score: 120 bits (300), Expect = 4.700e-30
Identity = 70/176 (39.77%), Postives = 106/176 (60.23%), Query Frame = 0
Query:    5 QAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQMRVV 180
            Q A+KL I +  A   M  F   F  V ++ME T++ AR  G   TI GR R+L +I S D   R+QAERQA+N+VIQG+AAD++K AM   +  L +WQ+       A  A P+M+LQIHDE++ E+  +E+DI +++ +  +    D      L+VP+ +K S G+S+G M+ +
Sbjct:   87 QVAKKLSISKSAAQQTMNDFFRRFRRVKSWMEETKQLARRNGYVLTIAGRRRYLNDIRSEDNGKRSQAERQAINTVIQGSAADLMKTAMIQLSENLQSWQEGTSTGELAMNARPQMVLQIHDEVLLELSFNERDIKKMQAIAVKSCCRDCEELFNLKVPLLLKCSCGLSFGSMKEI 262          
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Match: E1ZH25_CHLVA (POLAc domain-containing protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZH25_CHLVA)

HSP 1 Score: 115 bits (289), Expect = 1.430e-29
Identity = 71/171 (41.52%), Postives = 99/171 (57.89%), Query Frame = 0
Query:   10 LGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMARTITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRLLAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECMEADVVRELGLRVPMRIKMSVGMSWGQMRVV 180
            +G+  ++AA +   F+ S PGV+AF+E+     R+TG   T+ GR   LP IN     LR +AER+AVN+ +QG+AADV+K AM A    L   Q      G  G A+   +L IHDEL+ EV            ++RECME   VR+L L VP+ +KMS+G SWG ++ V
Sbjct:    1 MGVTPKEAAKLKQEFLESMPGVAAFLEKVVEDCRQTGYVETLAGRRCPLPNINLQSWRLRGEAERKAVNTPMQGSAADVMKAAMIALGESLQIGQA-----GEGGAAI---VLMIHDELVIEVAA----------IVRECMEVVPVRKLHLSVPLAVKMSMGRSWGDLKEV 153          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7271.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JBL3_9PHAE1.580e-5050.80DNA-directed DNA polymerase n=1 Tax=Ectocarpus sp.... [more]
D7FK42_ECTSI9.700e-4447.50DNA-directed DNA polymerase n=1 Tax=Ectocarpus sil... [more]
A0A6V2EN94_9STRA5.000e-3745.56Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A7S3V8E1_9STRA3.270e-3642.70DNA-directed DNA polymerase n=1 Tax=Chaetoceros de... [more]
A0A7R9VQU8_9STRA6.720e-3543.09Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2LIW8_9STRA1.670e-3444.57Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S4JPM5_9STRA1.140e-3343.58Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2WU15_9STRA2.630e-3141.57DNA-directed DNA polymerase n=1 Tax=Rhizochromulin... [more]
A0A7S2LVN7_9STRA4.700e-3039.77Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
E1ZH25_CHLVA1.430e-2941.52POLAc domain-containing protein n=1 Tax=Chlorella ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002298DNA polymerase APRINTSPR00868DNAPOLIcoord: 119..132
score: 69.23
coord: 46..57
score: 37.18
coord: 24..35
score: 32.69
IPR002298DNA polymerase APANTHERPTHR10133DNA POLYMERASE Icoord: 1..178
IPR001098DNA-directed DNA polymerase, family A, palm domainSMARTSM00482polaultra3coord: 1..136
e-value: 6.0E-9
score: 14.4
IPR001098DNA-directed DNA polymerase, family A, palm domainPFAMPF00476DNA_pol_Acoord: 1..176
e-value: 4.5E-45
score: 154.3
NoneNo IPR availableGENE3D1.10.150.20coord: 1..85
e-value: 4.7E-44
score: 152.6
NoneNo IPR availableGENE3D3.30.70.370coord: 86..174
e-value: 4.7E-44
score: 152.6
NoneNo IPR availablePANTHERPTHR10133:SF27DNA POLYMERASE THETAcoord: 1..178
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 2..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7271contigP-wetherbeei_contig7271:622..1701 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7271.1.1mRNA_P-wetherbeei_contig7271.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7271 246..1882 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7271.1.1 ID=prot_P-wetherbeei_contig7271.1.1|Name=mRNA_P-wetherbeei_contig7271.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp
MGSLQAARKLGIGERQAAGIMAAFMHSFPGVSAFMERTRRQARETGMART
ITGRIRHLPEINSLDQSLRAQAERQAVNSVIQGTAADVIKLAMHATNRRL
LAWQQERQRRGAAGGAVPRMLLQIHDELIFEVPGSEQDILRLRELLRECM
EADVVRELGLRVPMRIKMSVGMSWGQMRVVLNRTTDR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002298DNA_polymerase_A
IPR001098DNA-dir_DNA_pol_A_palm_dom
IPR043502DNA/RNA_pol_sf