prot_P-wetherbeei_contig727.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig727.1.1
Unique Nameprot_P-wetherbeei_contig727.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length1910
Homology
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BLAST of mRNA_P-wetherbeei_contig727.1.1 vs. uniprot
Match: L8GEZ4_ACACA (Tetratricopeptide repeat-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GEZ4_ACACA)

HSP 1 Score: 94.4 bits (233), Expect = 2.230e-15
Identity = 67/184 (36.41%), Postives = 97/184 (52.72%), Query Frame = 0 
Query:   38 ETREALEARIHKAYEAALRLQSSGAAGSDAWRRAGGGYVALLEEPALAEPGSLS-------RLRFLCLKNLGAVREAQGDADAALALYVAAADLDGSDVALWLRVASRGQAAGHFRLARLCLEQVLTLEPDHLAALRALASILEELGDVAAATAVARRLLSLDPWDATARVVAMRLAQRGPFSC 214
            ++ E  EA+  + Y+ AL LQS+G   +         Y  LL  P LA     S       +LR+LCLKNL  V +AQG+A+AAL  YV A D++ +DVA+W  V S  +   H  LAR   E+ L+  P H  +L AL  ++ E+GD A    + ++LL LDP   +A  +  +LA     +C
Sbjct:   18 DSSENEEAKCLELYKEALALQSAGDVRASKLH-----YKQLLRSPFLATTSHGSSANVAALKLRYLCLKNLADVNDAQGNANAALKYYVQALDVESTDVAVWYHVGSLARRTHHTALARHAFERALSCNPKHWLSLEALLEVVFEIGDQAGCRRICKQLLQLDPGHTSALALLGQLASVPDLTC 196
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BLAST of mRNA_P-wetherbeei_contig727.1.1 vs. uniprot
Match: A0A131Z0D7_RHIAP (Calcineurin-binding protein cabin-1 n=3 Tax=Rhipicephalinae TaxID=426437 RepID=A0A131Z0D7_RHIAP)

HSP 1 Score: 61.2 bits (147), Expect = 2.710e-5
Identity = 54/195 (27.69%), Postives = 87/195 (44.62%), Query Frame = 0 
Query:   93 LRFLCLKNLGAVREAQGDADAALALYVAAADLDGSDVALWLRVASRGQAAGHFRLARLCLEQVLTLEPDHLAALRALASILEELGDVAAATAVARRLLSLDPWDATARVV---------AMRLAQRGPFSCPPPAPIRHSPRAESAGAGAAHEGYDIGGAKNDIVTMAAV----VERHLHNPSWASLGQLLLRTH 274
            L+++ LKNLGA++   GD+  A+A Y+ AA++D +DV LW ++         + LAR+  E+ L     H   L  L ++L  L D       A R L LDP    A            A++  Q G F    P+    +   E A A    E  ++   + ++ T   +    + + L   SW +LGQ +L  +
Sbjct:   92 LKYVALKNLGAIQVRLGDSRGAVAAYLDAAEIDSTDVTLWYKIGRLALGLYLYPLARIAFEEGLRCSAQHWPCLSNLMTVLYVLNDDLGCLECAARALRLDPGYVKALAFREAVFRENPALKSCQDGVFKGCDPSVFTRAVSKEDAEA-VLSEARELRDKRRELYTPGKLPRIPLRKKLGEMSWVALGQAMLELY 285
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig727.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
L8GEZ4_ACACA2.230e-1536.41Tetratricopeptide repeat-containing protein n=1 Ta... [more]
A0A131Z0D7_RHIAP2.710e-527.69Calcineurin-binding protein cabin-1 n=3 Tax=Rhipic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 591..632
e-value: 0.0043
score: 26.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 95..205
e-value: 2.6E-13
score: 51.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 97..201
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 584..657
e-value: 7.8E-9
score: 37.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1798..1837
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1787..1910
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 547..568
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 502..532
IPR033053Histone transcription regulator 3/CABIN1PANTHERPTHR15502CALCINEURIN-BINDING PROTEIN CABIN 1-RELATEDcoord: 28..279
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 583..634

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig727contigP-wetherbeei_contig727:913..6802 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig727.1.1mRNA_P-wetherbeei_contig727.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig727 913..6802 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig727.1.1 ID=prot_P-wetherbeei_contig727.1.1|Name=mRNA_P-wetherbeei_contig727.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1910bp
SIQTHTPSRQEEMASWLTLQDEQLSGSSNEEDSDVEGETREALEARIHKA
YEAALRLQSSGAAGSDAWRRAGGGYVALLEEPALAEPGSLSRLRFLCLKN
LGAVREAQGDADAALALYVAAADLDGSDVALWLRVASRGQAAGHFRLARL
CLEQVLTLEPDHLAALRALASILEELGDVAAATAVARRLLSLDPWDATAR
VVAMRLAQRGPFSCPPPAPIRHSPRAESAGAGAAHEGYDIGGAKNDIVTM
AAVVERHLHNPSWASLGQLLLRTHAELSAPAVDGAPPLAARLAVVVAPLP
LPPWWPGPPPPESRRPEVAAAWKAFNDGCGGVAADMMVENDGTGDNGGSG
GGSGGGAGGGASESGRGASDDGSGGGGGDSRIGGAASTAAAGTGGADGGG
ATDADTNAAEEKATPAPKSSAPAAGGKGKGRAKGGPASVRVSARLRKIKE
GESQKLAAAARERGLRLQLDLIFWGWESAESDAAAAVSTAVPAAAPASAA
PEALAGRKEASNGSSRGRVAGESTAPAATATSAPAVDWWPEEVRWSVAEA
AAGDETSDGSEKSSRKDGRVVPEMALAARLLAPWSGSSEEACARCDDGGT
LLCCDFCPTVWHDRCLEKSPPPLVAFACEACCAEAAALEATAAGRAVASR
YDASAAPVLRALLEQLEGGDGNVFDAMRRFLEALAGAGAAELALEDEPGA
VAAATAATAGAAIDDSTGDVVGVGAGGRVGMCSAALAMEGLVRTYLGNST
PLSDPSSGSIGPPASSAFSLGCELTLAEMHMYAAAAAIMAGRAYREDAIS
HPPASAAAAAAAGAGPAGLIADFAAGREKSSAAVKRLRAAADAHGAACDA
VLPSLTATLGAPATAPALQVRLWWLAAQQAALAGRRAEALACVRECGDIL
RAMSTPPTTPRAATAQTPDFPEPLSLGPELFAWAAPAAAATAGIGSNSGR
ASAAPRSDGANAAVTAAAAATAAGGGGSASGARGAVLAHLPGGPQVDAAV
VETQMAALELACTGESVRDAFAQALADFKGAEAAAAAAADAAAMAVAKAA
AGAVAAAAAAVAAATGAAEAAAAETALLTGGAAVGDIQAAMMSPPQGDGS
GAAAAAGPAAVSAAALVSVSAAAPVAAPAAARAAPPAAAPAAAQAAAPAA
APAKAPAVVPVVAPAPAVSAVAAAQAAAHRAAALNTMRGLLDLLKWQYLG
KAAMPAAPENKGAAGAGAAAATAPGMPVMLPPGRAGELLKDLIRHERQNA
VVLAEAAAQSDHVCDVADAATARAASKAAAAAAKGAAAVVGTTMAGNDGT
AAAPAAAATAAAAASAAASAAADGAAKGAVVLGNSTTVFAMLVRMALLFG
EAYVALPVVIGVLRTLLDRGSGDGGGGGEGGAGADGAEPDRTSENALVEW
LVHVLVRVVAAAPSTTLAHWLRLAPAAMTMAAAAAGAGAPELAGASAAVK
TGALGPELKAVVALLIHRAARLDSKRLIGLAMKCVKLVVAAETTAAAVAS
AAASPTAAAASSGGASAGGATAAEASAANPGTMAPMNVLAVRCLGGVLVQ
RRKHQRERKKIGKPWFVLMLAAADALATLLPMPPTAAFLDGEGGESTGLG
SGGSGSGAGNGVGSGAGAGAGSGLEAKSRATLLCCLSLPQQQDLVAALRW
VFLAQAPTPGTRRSAKTFGANTLLRVGVCLVPMPVSRRVALVQLLHDRLG
RGGGGGGGGGYDSSDGDAEMGLCMDARSRFAGVVLEYLESAEVFDACQAE
DAVAAAENAAAADAATAAGAADSGGIQAVQEQFESQGPGAGLVVSELSVS
TPAPQQLGSASPKSNAEESSPSTVHYSVESPQDAAFTPMTDKSFIDSAAA
ATPRAPSPSHVSGGSDGGGRGAAAARGPAEFATPAPRRAGSAGGSGGDGC
RGGGQGSDAG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001965Znf_PHD
IPR011990TPR-like_helical_dom_sf
IPR013083Znf_RING/FYVE/PHD
IPR033053Hir3/CABIN1
IPR011011Znf_FYVE_PHD