prot_P-wetherbeei_contig7218.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7218.1.1
Unique Nameprot_P-wetherbeei_contig7218.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length657
Homology
BLAST of mRNA_P-wetherbeei_contig7218.1.1 vs. uniprot
Match: A0A835ZF85_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF85_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.310e-14
Identity = 41/73 (56.16%), Postives = 52/73 (71.23%), Query Frame = 0
Query:    2 LTGDKWYSQQAFRALNQAFGRAIRHKDDYAAIVLADPRFEESYVVDNLSRWARGHVMRCGTVEMSMQPLQLFY 74
            L+GD WYSQ+AFRALNQA GR IRH+ D+ AI+LADPRF+ S V   LS+W R  V R    E  ++PL+ F+
Sbjct:  923 LSGDAWYSQEAFRALNQAMGRCIRHRADFGAIILADPRFQFSGVQGGLSKWVRAQVQRFDAAEGVVEPLKRFF 995          
BLAST of mRNA_P-wetherbeei_contig7218.1.1 vs. uniprot
Match: A0A7S3V2I3_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3V2I3_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 6.200e-14
Identity = 42/78 (53.85%), Postives = 53/78 (67.95%), Query Frame = 0
Query:    2 LTGDKWYSQQAFRALNQAFGRAIRHKDDYAAIVLADPRFEESYVVDNLSRWARGHVMRCGTVEM-SMQPLQLFYWRHR 78
            L GD WYSQQA+RALNQA GR IRH+DD+ AI+L D RF    V  NLS+W R H  R  +  M ++Q LQ F++ H+
Sbjct:  153 LKGDMWYSQQAWRALNQALGRVIRHRDDFGAIILLDKRFSRKGVTQNLSKWMR-HSRRVYSSPMDTLQSLQEFFYSHK 229          
BLAST of mRNA_P-wetherbeei_contig7218.1.1 vs. uniprot
Match: A0A7S0I7Q2_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0I7Q2_MICPS)

HSP 1 Score: 80.1 bits (196), Expect = 1.710e-13
Identity = 36/77 (46.75%), Postives = 53/77 (68.83%), Query Frame = 0
Query:    1 MLTGDKWYSQQAFRALNQAFGRAIRHKDDYAAIVLADPRFEESYVVDNLSRWARGHVMRCGTVEMSMQPLQLFYWRH 77
            +L+GD+WYSQQAFRALNQA GR +RH++D+ AI+LAD R+    +  +L +W R  + +C   E S + L+ F+  H
Sbjct:   73 LLSGDQWYSQQAFRALNQAVGRCLRHRNDHGAILLADERYLRDDMTRHLPKWLRPAMRKCAGFEDSRRGLRSFFAMH 149          
BLAST of mRNA_P-wetherbeei_contig7218.1.1 vs. uniprot
Match: A0A6J1C1F9_MOMCH (Fanconi anemia group J protein homolog isoform X1 n=2 Tax=Momordica charantia TaxID=3673 RepID=A0A6J1C1F9_MOMCH)

HSP 1 Score: 84.7 bits (208), Expect = 3.370e-13
Identity = 39/74 (52.70%), Postives = 52/74 (70.27%), Query Frame = 0
Query:    1 MLTGDKWYSQQAFRALNQAFGRAIRHKDDYAAIVLADPRFEESYVVDNLSRWARGHVMRCGTVEMSMQPLQLFY 74
            +L+G++WY QQAFRALNQA GR IRHK DY AI+L D RF+E      +S+W R  V +C   E+SM+ L+ F+
Sbjct:  709 LLSGNEWYCQQAFRALNQAAGRCIRHKFDYGAIILLDERFQEERNRTYISKWLRKSVKQCDNFELSMEGLKSFF 782          
BLAST of mRNA_P-wetherbeei_contig7218.1.1 vs. uniprot
Match: A0A7S3F3R5_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F3R5_9VIRI)

HSP 1 Score: 73.9 bits (180), Expect = 1.960e-12
Identity = 34/56 (60.71%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    2 LTGDKWYSQQAFRALNQAFGRAIRHKDDYAAIVLADPRFEESYVVDNLSRWARGHV 57
            L+GDKWYS QA RA+NQA GR IRH+ DY AI+LAD RF    V  N+S W R H+
Sbjct:    8 LSGDKWYSHQAMRAVNQAVGRVIRHRFDYGAILLADERFGSPSVQANMSTWLRPHM 63          
BLAST of mRNA_P-wetherbeei_contig7218.1.1 vs. uniprot
Match: A0A2R5GSH0_9STRA (Fanconi anemia group J protein-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSH0_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.620e-12
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 0
Query:    2 LTGDKWYSQQAFRALNQAFGRAIRHKDDYAAIVLADPRFEESYVVDNLSRWARGHVMRCGTVEMSMQPLQLFYWRHR 78
            L+G  WYSQQA+RALNQA GR IRHK+D+ A++  D RF++  V  NL +W RG V     +E++ + L  F+ R +
Sbjct:  822 LSGHSWYSQQAYRALNQALGRVIRHKNDFGAVIFLDARFDKPEVQRNLPKWMRGVVKTSQPIELTAKSLTEFFGRQK 898          
BLAST of mRNA_P-wetherbeei_contig7218.1.1 vs. uniprot
Match: A0A1S8W176_9FUNG (DNA helicase n=1 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W176_9FUNG)

HSP 1 Score: 80.9 bits (198), Expect = 4.770e-12
Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    1 MLTGDKWYSQQAFRALNQAFGRAIRHKDDYAAIVLADPRFEESYVVDNLSRWARGHVMRCGTVEMSMQPLQLFY 74
            +LTG  WYS QA+RALNQA GR IRH+DD+ AI+L D RF +S  + NLS+W RG       +  +   L+ F+
Sbjct:  813 LLTGSDWYSMQAYRALNQALGRCIRHRDDWGAIILLDERFSQSRCISNLSKWIRGRTRPWKNLREAETTLRSFF 886          
BLAST of mRNA_P-wetherbeei_contig7218.1.1 vs. uniprot
Match: D7FLD2_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD2_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 4.930e-12
Identity = 44/108 (40.74%), Postives = 64/108 (59.26%), Query Frame = 0
Query:    1 MLTGDKWYSQQAFRALNQAFGRAIRHKDDYAAIVLADPRFEESY-VVDNLSRWARGHVMRCGTVEMSMQPLQLFYWRHRS---------------AGTAAVAGDESAG 92
            ++ G  WYS QAFRA+NQA GR IRH+ D+ AIVL DPR+  S     +LS+W R  V +C +VE+S+  ++ F+ +H+                AG+++V GD  AG
Sbjct:  815 LVGGRAWYSLQAFRAVNQAVGRCIRHRSDFGAIVLCDPRYASSTETTASLSKWVRSSVRQCRSVEVSLPLVEAFFRQHQPQKDQHHAVQPEASACAGSSSVGGDGDAG 922          
BLAST of mRNA_P-wetherbeei_contig7218.1.1 vs. uniprot
Match: A0A1S8W1S5_9FUNG (DNA helicase n=2 Tax=Batrachochytrium salamandrivorans TaxID=1357716 RepID=A0A1S8W1S5_9FUNG)

HSP 1 Score: 80.9 bits (198), Expect = 5.260e-12
Identity = 36/74 (48.65%), Postives = 48/74 (64.86%), Query Frame = 0
Query:    1 MLTGDKWYSQQAFRALNQAFGRAIRHKDDYAAIVLADPRFEESYVVDNLSRWARGHVMRCGTVEMSMQPLQLFY 74
            +LTG  WYS QA+RALNQA GR IRH+DD+ AI+L D RF +S  + NLS+W RG       +  +   L+ F+
Sbjct:  813 LLTGSDWYSMQAYRALNQALGRCIRHRDDWGAIILLDERFSQSRCISNLSKWIRGRTRPWKNLREAETTLRSFF 886          
BLAST of mRNA_P-wetherbeei_contig7218.1.1 vs. uniprot
Match: A0A0E0IND0_ORYNI (Helicase ATP-binding domain-containing protein n=7 Tax=Oryza TaxID=4527 RepID=A0A0E0IND0_ORYNI)

HSP 1 Score: 80.9 bits (198), Expect = 5.490e-12
Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 0
Query:    1 MLTGDKWYSQQAFRALNQAFGRAIRHKDDYAAIVLADPRFEESYVVDNLSRWARGHVMRCGTVEMSMQPLQLFY 74
            +L+G++WY  QAFRALNQA GR IRHK DY  I+L D R++E   +  +S+W R  +  CGT + +M  L  F+
Sbjct:  775 LLSGNEWYCHQAFRALNQAAGRCIRHKFDYGGIILIDERYQEERNIVYISKWLRNSIRNCGTFQETMDGLTRFF 848          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7218.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZF85_9STRA1.310e-1456.16Helicase C-terminal domain-containing protein n=1 ... [more]
A0A7S3V2I3_9STRA6.200e-1453.85Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S0I7Q2_MICPS1.710e-1346.75Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A6J1C1F9_MOMCH3.370e-1352.70Fanconi anemia group J protein homolog isoform X1 ... [more]
A0A7S3F3R5_9VIRI1.960e-1260.71Hypothetical protein (Fragment) n=1 Tax=Prasinoder... [more]
A0A2R5GSH0_9STRA4.620e-1246.75Fanconi anemia group J protein-like n=1 Tax=Hondae... [more]
A0A1S8W176_9FUNG4.770e-1248.65DNA helicase n=1 Tax=Batrachochytrium salamandrivo... [more]
D7FLD2_ECTSI4.930e-1240.74DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A1S8W1S5_9FUNG5.260e-1248.65DNA helicase n=2 Tax=Batrachochytrium salamandrivo... [more]
A0A0E0IND0_ORYNI5.490e-1247.30Helicase ATP-binding domain-containing protein n=7... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 4..54
e-value: 6.3E-17
score: 62.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..59
e-value: 1.5E-17
score: 65.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 293..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 112..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..162
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 196..210
NoneNo IPR availablePANTHERPTHR11472:SF47FANCONI ANEMIA GROUP J PROTEINcoord: 2..165
IPR045028Helicase superfamily 1/2, DinG/Rad3-likePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 2..165

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7218contigP-wetherbeei_contig7218:829..3047 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7218.1.1mRNA_P-wetherbeei_contig7218.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7218 697..3100 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7218.1.1 ID=prot_P-wetherbeei_contig7218.1.1|Name=mRNA_P-wetherbeei_contig7218.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=657bp
MLTGDKWYSQQAFRALNQAFGRAIRHKDDYAAIVLADPRFEESYVVDNLS
RWARGHVMRCGTVEMSMQPLQLFYWRHRSAGTAAVAGDESAGAGSAAAGV
VMQQQLRTFPPLVRPLSMAGRTPQPTGGGSGFGGGGSGGSDNLTTTTARD
GKPASRQLTISQAFKGAGVAKPPPSTPERPQWAPSEGERPQWASSEGERP
PNTAPVQQARPSWTHGAGAVAENYGGGGGADGKDIEAPMAVAKARNLPAD
PYHSGGLPRSPLRPQVVWQQSVGAADQTPERRAPAPVCRERVGGTTGAVE
RSPESQPLSQEPTLSAVRAVVVSCQQGHELVTVIRDGGAGSDTTGGDSGC
GGGSSGLLAADLAVDCAVADSPFFATLRGLCATAGADGGEQLQAAARQLA
GAAPARSAAAARVALLDLPGGSRRMSESGDGPAGFCGVQLRGAAAPAVFG
PAGLDVDGRAKPVVEVWSGQDGVVYQPLVCLACAAAGTGAASASGAAGIV
AAAAAVVVGARILAACAERSSLAGRIWVFRDAVCISAAAPATAVAMVAAA
EVRAAETAKSALGLSPAATASVDVRDGTGMPPAPAPMPAARSGRIFGCSG
TRGMSSAAGSLDAAARGMASGCGGGGGGAGGAGVAGNGGGLSHLGLVAKR
ARLTSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006555ATP-dep_Helicase_C
IPR027417P-loop_NTPase
IPR045028DinG/Rad3-like