prot_P-wetherbeei_contig7206.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7206.1.1
Unique Nameprot_P-wetherbeei_contig7206.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length504
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig7206.1.1 vs. uniprot
Match: D7FH06_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH06_ECTSI)

HSP 1 Score: 129 bits (323), Expect = 4.120e-29
Identity = 62/89 (69.66%), Postives = 73/89 (82.02%), Query Frame = 0 
Query:  417 STG--KRKQNDAFRRVHDHEWLGKIKQGMDDNTYESAFGAGGYGFKAHEKLSQVRGKDFRHEKTKKKRGSYRGGQIDLGSNSIKFEDSD 503
            STG   R Q +AF+RV D +W+G +K+G DDNTYE  FG GGYGFKA EKLS+VRGKDFRHEKTKKKRGSYRGG+I + S S+KF+DSD
Sbjct:  322 STGGKSRTQGEAFKRVQDEQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSD 410
[Close]
BLAST of mRNA_P-wetherbeei_contig7206.1.1 vs. uniprot
Match: A0A6H5JYW0_9PHAE (LisH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW0_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.200e-28
Identity = 62/89 (69.66%), Postives = 73/89 (82.02%), Query Frame = 0 
Query:  417 STG--KRKQNDAFRRVHDHEWLGKIKQGMDDNTYESAFGAGGYGFKAHEKLSQVRGKDFRHEKTKKKRGSYRGGQIDLGSNSIKFEDSD 503
            STG   R Q +AF+RV D +W+G +K+G DDNTYE  FG GGYGFKA EKLS+VRGKDFRHEKTKKKRGSYRGG+I + S S+KF+DSD
Sbjct:  431 STGGKSRSQGEAFKRVQDEQWVGGLKKGFDDNTYEGTFGQGGYGFKASEKLSKVRGKDFRHEKTKKKRGSYRGGEISMNSYSVKFDDSD 519
[Close]
BLAST of mRNA_P-wetherbeei_contig7206.1.1 vs. uniprot
Match: A0A061RD47_9CHLO (SRP40_C domain-containing protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RD47_9CHLO)

HSP 1 Score: 105 bits (263), Expect = 6.250e-22
Identity = 52/78 (66.67%), Postives = 62/78 (79.49%), Query Frame = 0 
Query:  426 AFRRVHDHEWLGKIKQGMDDNTYESAFGAGGYGFKAHEKLSQVRGKDFRHEKTKKKRGSYRGGQIDLGSNSIKFEDSD 503
            AF+RV + EW+GK  +G  DN+Y   FGA G+G+KA E L +VRGKDFRHEKTKKKRGSYRGG+I+LGSNS KFE  D
Sbjct:  205 AFQRVREEEWIGK--KGSWDNSYTGTFGAQGWGYKAQEVLGKVRGKDFRHEKTKKKRGSYRGGKIELGSNSFKFESDD 280
[Close]
BLAST of mRNA_P-wetherbeei_contig7206.1.1 vs. uniprot
Match: A0A836CH62_9STRA (SRP40, C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH62_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.370e-21
Identity = 54/90 (60.00%), Postives = 63/90 (70.00%), Query Frame = 0 
Query:  412 ASADGSTGKRKQNDAFRRVHDHEWLGKIKQGMDDNTYESAFGAGGYGFKAHEKLSQVRGKDFRHEKTKKKRGSYRGGQIDLGSNSIKFED 501
            A   GS+G     +AFRRV D EW+ K+  G D N YE  FG  GYG+KAH+ L  VRGKDFRHEKTKKKRGSYRGG I + SNS KF++
Sbjct:  435 AKTPGSSG----GEAFRRVKDEEWVDKLANGTDTNHYEDTFGQDGYGYKAHQVLINVRGKDFRHEKTKKKRGSYRGGTITMASNSFKFDE 520
[Close]
BLAST of mRNA_P-wetherbeei_contig7206.1.1 vs. uniprot
Match: A0A7S3Y1Y8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1Y8_HETAK)

HSP 1 Score: 100 bits (248), Expect = 3.160e-20
Identity = 53/85 (62.35%), Postives = 61/85 (71.76%), Query Frame = 0 
Query:  420 KRKQNDAFRRVHDHEWLGKIKQ-GMDDNTYESAFGAGGYGFKAHEKLSQVRGKDFRHEKTKKKRGSYRGGQIDLGSNSIKFEDSD 503
            +R Q +AF+RV    W   IK   + DN+YE  FG  GYG KA E L +VRGKDFRHEKTKKKRG+YRGGQI L SNSIKF +SD
Sbjct:  157 ERVQGEAFKRVCSDTWGSAIKHDALKDNSYEGTFGGDGYGAKASEVLLKVRGKDFRHEKTKKKRGNYRGGQITLASNSIKFANSD 241
[Close]
BLAST of mRNA_P-wetherbeei_contig7206.1.1 vs. uniprot
Match: A0A5J4XKK8_9CHLO (Nucleolar GTPase ATPase (ISS) n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XKK8_9CHLO)

HSP 1 Score: 101 bits (252), Expect = 6.180e-20
Identity = 57/92 (61.96%), Postives = 64/92 (69.57%), Query Frame = 0 
Query:  412 ASADGSTGKRKQNDAFRRVHDHEWLGKIKQGMDDNTYESAFGAGGYGFKAHEKLSQVRGKDFRHEKTKKKRGSYRGGQIDLGSNSIKFEDSD 503
            AS    TG R    AF+RV+D EWLGK  +G  DN+YE+ FG  GYG KA + L QVRGKDFRHEKTKKKRGSY+GG ID   NS KFE  D
Sbjct:  268 ASGKVPTGAR----AFKRVNDEEWLGK--KGAWDNSYEAKFGNSGYGAKASQTLLQVRGKDFRHEKTKKKRGSYKGGIIDNNVNSFKFESDD 353
[Close]
BLAST of mRNA_P-wetherbeei_contig7206.1.1 vs. uniprot
Match: A0A7S1T5X8_9CHLO (Hypothetical protein n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T5X8_9CHLO)

HSP 1 Score: 99.8 bits (247), Expect = 1.040e-19
Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 0 
Query:  426 AFRRVHDHEWLGKIKQGMDDNTYESAFGAGGYGFKAHEKLSQVRGKDFRHEKTKKKRGSYRGGQID-LGSNSIKFEDSD 503
            AF+RV + EWLGK  +G  DN+Y   FG  G+G+KA E L +VRGKDFRHEKTKKKRG+Y+GG+ID +GSNSIKFE  D
Sbjct:  212 AFQRVKEEEWLGK--KGAWDNSYVGTFGQDGWGYKAQEVLGKVRGKDFRHEKTKKKRGTYKGGKIDNMGSNSIKFESDD 288
[Close]
BLAST of mRNA_P-wetherbeei_contig7206.1.1 vs. uniprot
Match: A0A4D9D037_9STRA (SRP40_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D037_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.170e-19
Identity = 53/86 (61.63%), Postives = 62/86 (72.09%), Query Frame = 0 
Query:  416 GSTGKRKQNDAFRRVHDHEWLGKIKQG-MDDNTYESAFGAGGYGFKAHEKLSQVRGKDFRHEKTKKKRGSYRGGQIDLGSNSIKFE 500
            G  G+R   +AFRRV D  W  +IK   + DN+Y   FG+GGYG KA EKL  VRGKDFRHEKTKKKRGSYRGG I L S+SIK++
Sbjct:  386 GKEGRRVSGEAFRRVDDEYWGQQIKDDRLKDNSYAGTFGSGGYGAKASEKLMTVRGKDFRHEKTKKKRGSYRGGTISLESHSIKYD 471
[Close]
BLAST of mRNA_P-wetherbeei_contig7206.1.1 vs. uniprot
Match: A0A250WZI6_9CHLO (SRP40_C domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WZI6_9CHLO)

HSP 1 Score: 99.0 bits (245), Expect = 8.670e-19
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 0 
Query:  412 ASADGSTGKRKQNDAFRRVHDHEWLGKIKQGMDDNTYESAFGAGGYGFKAHEKLSQVRGKDFRHEKTKKKRGSYRGGQIDLGSN-SIKFEDSD 503
            +SA+ STGK KQ   F+RV   EWLGK  +G  DN YE+ FG  G+GFKA + L QVRGKDFRHEKTKKKRGSY+GG ID  +  S KF+  D
Sbjct:  309 SSAEKSTGKGKQ--FFQRVKAEEWLGK--KGAIDNRYEATFGEAGWGFKAQQVLGQVRGKDFRHEKTKKKRGSYKGGLIDPNATFSFKFDSDD 397
[Close]
BLAST of mRNA_P-wetherbeei_contig7206.1.1 vs. uniprot
Match: A0A383WLZ7_TETOB (SRP40_C domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383WLZ7_TETOB)

HSP 1 Score: 97.4 bits (241), Expect = 1.460e-18
Identity = 55/97 (56.70%), Postives = 66/97 (68.04%), Query Frame = 0 
Query:  410 NGASADG--STGKRKQNDAFRRVHDHEWLGKIKQGMDDNTYESAFGAGGYGFKAHEKLSQVRGKDFRHEKTKKKRGSYRGGQIDLGSN-SIKFEDSD 503
            NG +++G  +TG +    AF+RVHDHEWL K  +G   N YE  FG  G+GFKA + L  VRGKDFRHEKTKKKRGSY+GG ID  +  S KFE  D
Sbjct:  250 NGPNSEGKATTGAK----AFKRVHDHEWLDK--KGSWSNRYEDTFGQNGWGFKAQQVLGAVRGKDFRHEKTKKKRGSYKGGNIDPNATFSYKFESDD 340
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7206.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FH06_ECTSI4.120e-2969.66LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JYW0_9PHAE1.200e-2869.66LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A061RD47_9CHLO6.250e-2266.67SRP40_C domain-containing protein n=1 Tax=Tetrasel... [more]
A0A836CH62_9STRA1.370e-2160.00SRP40, C-terminal domain-containing protein n=1 Ta... [more]
A0A7S3Y1Y8_HETAK3.160e-2062.35Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A5J4XKK8_9CHLO6.180e-2061.96Nucleolar GTPase ATPase (ISS) n=1 Tax=Trebouxia sp... [more]
A0A7S1T5X8_9CHLO1.040e-1964.56Hypothetical protein n=1 Tax=Tetraselmis chuii Tax... [more]
A0A4D9D037_9STRA1.170e-1961.63SRP40_C domain-containing protein n=1 Tax=Nannochl... [more]
A0A250WZI6_9CHLO8.670e-1960.22SRP40_C domain-containing protein n=1 Tax=Chlamydo... [more]
A0A383WLZ7_TETOB1.460e-1856.70SRP40_C domain-containing protein n=1 Tax=Tetrades... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007718Srp40, C-terminalPFAMPF05022SRP40_Ccoord: 427..499
e-value: 6.6E-26
score: 91.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 325..346
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 256..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 296..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 390..420
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..429
NoneNo IPR availablePANTHERPTHR23216NUCLEOLAR AND COILED-BODY PHOSPHOPROTEIN 1coord: 4..502

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7206contigP-wetherbeei_contig7206:1645..3156 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7206.1.1mRNA_P-wetherbeei_contig7206.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7206 903..3161 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7206.1.1 ID=prot_P-wetherbeei_contig7206.1.1|Name=mRNA_P-wetherbeei_contig7206.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=504bp
MASGSSEEEGSSDGEDAGEVKKPQVNGGTAAGAGAGGSSSPEDESSDDNE
AAPPAKAAARTLAAAPAVPAASSGSDSSEEEQQENSDDDDEEDAPAAALQ
KRKAPEPSASSSGSEDDGSDDSDAPEAAVAQPAKRSKTAKAAAVAAAVAA
AAAAKNSSDDDDDDGNEDGDDDSDDNDDDNADSAIAVPAIKGGGGKGGGG
GSSGGGGSSGGGGTVGGGVSSSDDGSDDGSDNDSSSDEEGGSGGGGSGRR
GVAPVASATSDSSTVSDVASDADDSSSAAIGTKKASGKVPAAANGGATSD
SGSGSGSEAESGSGSGSESESQSSDDEVQEARKRAAKREAEDVRRKQAAA
AAAAWMPKPPAALKAAANGTGEGDIVGASGGRHGSAKGKGSDAGSNSVGN
GSGTGHSIVNGASADGSTGKRKQNDAFRRVHDHEWLGKIKQGMDDNTYES
AFGAGGYGFKAHEKLSQVRGKDFRHEKTKKKRGSYRGGQIDLGSNSIKFE
DSD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007718Srp40_C