prot_P-wetherbeei_contig7159.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7159.1.1
Unique Nameprot_P-wetherbeei_contig7159.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length227
Homology
BLAST of mRNA_P-wetherbeei_contig7159.1.1 vs. uniprot
Match: D7FHF5_ECTSI (Nup54 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF5_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.830e-15
Identity = 43/117 (36.75%), Postives = 71/117 (60.68%), Query Frame = 0
Query:   42 PSNVDQRAWEEAQRDNPDPDKLVPYLVVGFDELLQQAQERQTEAAKMNDLAQRLREMVGSRVQQSRRAAAAAEACRRKHVEQRHRLLQVMQKMELLRCINLPLHDEERRLRDRLEQV 158
            P ++D + W++A+ DNPDP KL P  V+G++ L ++   +Q E  KM +    ++      ++         EA RR+H+ Q HR L++ +K++ +RC+N PL D+ER+LR RLE V
Sbjct:  109 PPHMDDKTWQKAEEDNPDPSKLAPAAVIGWESLKERLVGQQQEMKKMAEFVALMQNTTRGGLRSVALVRTQMEASRRRHLAQAHRFLKLQRKLDAVRCLNKPLSDDERQLRTRLEGV 225          
BLAST of mRNA_P-wetherbeei_contig7159.1.1 vs. uniprot
Match: A0A7S2UV49_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV49_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 2.140e-12
Identity = 49/126 (38.89%), Postives = 71/126 (56.35%), Query Frame = 0
Query:   48 RAWEEAQRDNPDPDKLVPYLVVGFDELLQQAQERQTEAAKMNDLAQRLREMVGSRVQQSRRAAAAAEACRRKHVEQRHRLLQVMQKMELLRCINLPLHDEERRLRDRLEQVMVHQQGLRQRLKELV 173
            +AW+ A+R NPDP+ L P  +VG   LL + Q +    A +    +RLR+ V S  Q + R  +A E  R +H    ++ LQV+ K+E+LRC  L +  EE +LR RLEQ+    Q    RLK L+
Sbjct:    3 QAWDRAERANPDPESLAPTPIVGQAALLGRIQHQTQHTADLQSYVKRLRDTVHSLQQTAHRTESAMEKSRLRHRRLANKFLQVLLKVEVLRCQGLGVAPEEHQLRARLEQLAKALQDPHSRLKHLL 128          
BLAST of mRNA_P-wetherbeei_contig7159.1.1 vs. uniprot
Match: A0A7S1U6G9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U6G9_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 4.650e-12
Identity = 45/118 (38.14%), Postives = 71/118 (60.17%), Query Frame = 0
Query:   42 PSNVDQRAWEEAQRDNPDPDKLVPYLVVGFDELLQQAQERQTEAAKMNDLAQRLREMVGSRVQQSRRAAAAAEACRRKHVEQRHRLLQVMQKMELLRCINLPLHDEERRLRDRLEQVM 159
            P+ VD+++W+ A+  NP+PD  VP  V GF+EL ++ Q +Q          + +R  VG+  + S R  A  E  R++++  RHRLL V++K+E+LRC+  PL   ER+ R  LE V+
Sbjct:  298 PAWVDEKSWQAAEEANPEPDTCVPTAVFGFNELQERLQFQQQTTRDWASFVKEIRSEVGTITEASLRTQARLETQRQENMLLRHRLLNVIRKVEVLRCLGQPLAHGERQARGDLEGVV 415          
BLAST of mRNA_P-wetherbeei_contig7159.1.1 vs. uniprot
Match: A0A1X2H0M2_SYNRA (Nucleoporin complex subunit 54-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H0M2_SYNRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.980e-11
Identity = 46/126 (36.51%), Postives = 74/126 (58.73%), Query Frame = 0
Query:   42 PSNVDQRAWEEAQRDNPDPDKLVPYLVVGFDELLQ----QAQERQTEAAKMNDLAQRLREM-----VGSRVQQSRRAAAAAEACRRKHVEQRHRLLQVMQKMELLRCINLPLHDEERRLRDRLEQV 158
            P + D+  WEEAQR NPDP ++VP L VGF ++L+    Q+QE +    K+ ++ QRL        +GS V          E  +R+HVE   RL++++  +++LR    PLHD+E++L + LE++
Sbjct:  320 PPDQDEHLWEEAQRKNPDPARMVPVLAVGFSDVLKRMEVQSQETELHQEKLKEIGQRLENAKQKYYLGSLVN--------LEEKKRRHVEASQRLIRLLGYVQVLRYKGFPLHDDEKKLMEALERL 437          
BLAST of mRNA_P-wetherbeei_contig7159.1.1 vs. uniprot
Match: A0A6P7SJT7_OCTVU (nucleoporin p54 n=1 Tax=Octopus vulgaris TaxID=6645 RepID=A0A6P7SJT7_OCTVU)

HSP 1 Score: 71.6 bits (174), Expect = 7.340e-11
Identity = 49/139 (35.25%), Postives = 82/139 (58.99%), Query Frame = 0
Query:   43 SNVDQRAWEEAQRDNPDPDKLVPYLVVGFDELLQQA--QERQTE--AAKMNDLAQRLREMVGSRVQQSRRAAAAAEACRRKHVEQRHRLLQVMQKMELLRCINLPLHDEERRLRDRLEQV---MVHQQGLRQRLKELVA 174
            + +D   W++A++DNPDPD  +P  +VGFDELLQ+   QE+QT+    +++ +AQ L E+      + R   A  +  +RKH+   HRLL+V+ K E+ R + + + D E + R +LE +   + H    + RL EL++
Sbjct:  323 AGIDPLLWQQAKKDNPDPDNFIPVPIVGFDELLQRLKQQEQQTKNHQNRLDLIAQELNELQ----LKHRNTVARMDEAKRKHLNLGHRLLKVIVKQEVYRKLGVAMQDTEEQFRAQLEALQSELNHPTQFKGRLNELLS 457          
BLAST of mRNA_P-wetherbeei_contig7159.1.1 vs. uniprot
Match: A0A0L8GMI1_OCTBM (Nup54 domain-containing protein n=2 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8GMI1_OCTBM)

HSP 1 Score: 70.9 bits (172), Expect = 1.330e-10
Identity = 44/118 (37.29%), Postives = 72/118 (61.02%), Query Frame = 0
Query:   43 SNVDQRAWEEAQRDNPDPDKLVPYLVVGFDELLQQA--QERQTE--AAKMNDLAQRLREMVGSRVQQSRRAAAAAEACRRKHVEQRHRLLQVMQKMELLRCINLPLHDEERRLRDRLE 156
            + +D   W++A++DNPDPD  +P  +VGFDELLQ+   QE+QT+    +++ +AQ L E+      + R   A  +  +RKH+   HRLL+V+ K E+ R + + + D E + R +LE
Sbjct:  325 AGIDPLLWQQAKKDNPDPDNFIPVPIVGFDELLQRLKQQEQQTKNHQNRLDLIAQELNELQ----LKHRNTVARMDEAKRKHLNLGHRLLKVIVKQEVYRKLGVAMQDTEEQFRAQLE 438          
BLAST of mRNA_P-wetherbeei_contig7159.1.1 vs. uniprot
Match: A0A812BT47_SEPPH (NUP54 n=2 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812BT47_SEPPH)

HSP 1 Score: 70.9 bits (172), Expect = 1.500e-10
Identity = 48/140 (34.29%), Postives = 81/140 (57.86%), Query Frame = 0
Query:   42 PSNVDQRAWEEAQRDNPDPDKLVPYLVVGFDELLQQA--QERQTEA--AKMNDLAQRLREMVGSRVQQSRRAAAAAEACRRKHVEQRHRLLQVMQKMELLRCINLPLHDEERRLRDRLEQV---MVHQQGLRQRLKELVA 174
            P+ +D   W++A++DNPDP+  VP  +VGF +L Q+   QE+QT+   ++++ +AQ L E+        R   A  E  +RKH+   HRLL+V+ K E+ R + + + D E + R +LE +   + H    + RL EL++
Sbjct:  545 PAGIDPLLWQQAKKDNPDPESFVPIPIVGFQQLQQRLKQQEQQTKCHQSRIDLIAQELNELQNKH----RNTIARVEEAKRKHLNLGHRLLKVIAKQEVYRKLGVAMQDTEEQFRAQLEALQSELNHPTQFKGRLNELLS 680          
BLAST of mRNA_P-wetherbeei_contig7159.1.1 vs. uniprot
Match: A0A077WZJ4_9FUNG (Nup54 domain-containing protein n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A077WZJ4_9FUNG)

HSP 1 Score: 69.3 bits (168), Expect = 3.660e-10
Identity = 43/121 (35.54%), Postives = 76/121 (62.81%), Query Frame = 0
Query:   42 PSNVDQRAWEEAQRDNPDPDKLVPYLVVGFDELLQ--QAQERQTEA--AKMNDLAQRLREMVGSRVQQSRRAAAAAEACRRKHVEQRHRLLQVMQKMELLRCINLPLHDEERRLRDRLEQV 158
            P N D++AW+EAQ+ NPDP +LVP L VGFD++ +  +AQERQ  A  A + ++  +++++ G+  Q +   A   +  +R+ ++   R++++++  ++LR   LPL  EE  +R  LE V
Sbjct:  182 PQNHDKKAWDEAQKKNPDPSRLVPALAVGFDDVKKRMEAQERQAGAHLATLKEIEDKIKKLKGADAQST---ANKLDEYKRRQMDLTQRVIKILKYAQVLRNKGLPLTSEEEAMRTLLENV 299          
BLAST of mRNA_P-wetherbeei_contig7159.1.1 vs. uniprot
Match: A0A482X300_LAOST (Uncharacterized protein n=1 Tax=Laodelphax striatellus TaxID=195883 RepID=A0A482X300_LAOST)

HSP 1 Score: 69.3 bits (168), Expect = 4.700e-10
Identity = 39/115 (33.91%), Postives = 67/115 (58.26%), Query Frame = 0
Query:   42 PSNVDQRAWEEAQRDNPDPDKLVPYLVVGFDELLQQAQERQTEAAKMNDLAQRLREMVGSRVQQSRRAAAAAEACRRKHVEQRHRLLQVMQKMELLRCINLPLHDEERRLRDRLE 156
            P+ +D R W+ AQ DNPDPDKL+P  ++GF+EL  +A+ ++ E      +  R+ E +    ++     A     R++ ++  HR+L+V+ K E+ R + + L  EE  LR++LE
Sbjct:  390 PAGIDARLWKSAQLDNPDPDKLIPVPIIGFNELRWRARCQEQETKVHQAVLDRIAEDIAELQRRHSETVAKIAEYRQRFIQLEHRVLKVLVKQEITRNVGVALRPEEDILRNQLE 504          
BLAST of mRNA_P-wetherbeei_contig7159.1.1 vs. uniprot
Match: UPI00193E10A6 (probable nucleoporin Nup54 isoform X2 n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI00193E10A6)

HSP 1 Score: 68.6 bits (166), Expect = 7.700e-10
Identity = 38/116 (32.76%), Postives = 67/116 (57.76%), Query Frame = 0
Query:   41 CPSNVDQRAWEEAQRDNPDPDKLVPYLVVGFDELLQQAQERQTEAAKMNDLAQRLREMVGSRVQQSRRAAAAAEACRRKHVEQRHRLLQVMQKMELLRCINLPLHDEERRLRDRLE 156
             P+ +D R W+ AQ DNPDPDKL+P  ++GF+EL  +A+ ++ E      +  R+ E +    ++     A     R++ ++  HR+L+V+ K E+ R + + L  EE  LR++L+
Sbjct:  254 APAGIDSRLWKSAQLDNPDPDKLIPVPIIGFNELRWRARCQEQETKVHQAVLDRISEDIAELQRRQSETVAKITEYRQRFLQLEHRVLKVLVKQEITRNVGVALRPEEDVLRNQLD 369          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7159.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHF5_ECTSI1.830e-1536.75Nup54 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2UV49_9STRA2.140e-1238.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1U6G9_9STRA4.650e-1238.14Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A1X2H0M2_SYNRA2.980e-1136.51Nucleoporin complex subunit 54-domain-containing p... [more]
A0A6P7SJT7_OCTVU7.340e-1135.25nucleoporin p54 n=1 Tax=Octopus vulgaris TaxID=664... [more]
A0A0L8GMI1_OCTBM1.330e-1037.29Nup54 domain-containing protein n=2 Tax=Octopus bi... [more]
A0A812BT47_SEPPH1.500e-1034.29NUP54 n=2 Tax=Sepia pharaonis TaxID=158019 RepID=A... [more]
A0A077WZJ4_9FUNG3.660e-1035.54Nup54 domain-containing protein n=2 Tax=Lichtheimi... [more]
A0A482X300_LAOST4.700e-1033.91Uncharacterized protein n=1 Tax=Laodelphax striate... [more]
UPI00193E10A67.700e-1032.76probable nucleoporin Nup54 isoform X2 n=1 Tax=Nila... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025712Nucleoporin Nup54, alpha-helical domainPFAMPF13874Nup54coord: 42..174
e-value: 6.5E-26
score: 91.1
IPR024864Nucleoporin Nup54/Nup57/Nup44PANTHERPTHR13000NUCLEOPORIN P54coord: 24..178
NoneNo IPR availablePANTHERPTHR13000:SF0NUCLEOPORIN P54coord: 24..178

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7159contigP-wetherbeei_contig7159:618..2699 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7159.1.1mRNA_P-wetherbeei_contig7159.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7159 520..2816 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7159.1.1 ID=prot_P-wetherbeei_contig7159.1.1|Name=mRNA_P-wetherbeei_contig7159.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=227bp
MPRLAPFREPIYGGSSLQCSIPLWQFFLYWLAGPNAPQHPCPSNVDQRAW
EEAQRDNPDPDKLVPYLVVGFDELLQQAQERQTEAAKMNDLAQRLREMVG
SRVQQSRRAAAAAEACRRKHVEQRHRLLQVMQKMELLRCINLPLHDEERR
LRDRLEQVMVHQQGLRQRLKELVAWQSQASVRGSYSEAFKSDSSLPLFRP
SYIASLWGATPPRNANVAELVSADAV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025712Nup54_alpha-helical_dom
IPR024864Nup54/Nup57/Nup44