prot_P-wetherbeei_contig7033.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7033.1.2
Unique Nameprot_P-wetherbeei_contig7033.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length413
Homology
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A836CPD6_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPD6_9STRA)

HSP 1 Score: 368 bits (944), Expect = 3.790e-120
Identity = 184/324 (56.79%), Postives = 237/324 (73.15%), Query Frame = 0
Query:   68 AEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGV-LLQCKKCFRWL-HNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNS-----LSGAAALVVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 384
            A    ILCCLCGKSIQPN A +C ECL   VD+TE I + G+ + QC+KC RW   N+ +V C+LES ELLA+CLKRI GL+K D+VDA+F+WTEPHS R+KV+ T++R+VLNGV +QQ+       +VE VV+W+QC DC REF NQTW+A VQVRQRVDHKRTF YLEQL+L  NA    VD+   +DG+DFFF+++AHA+ F ++L   VP R   +KK+VS+D+HSN+ N Q S+ VD+VPLC+ DLVV+P G G       L+G  +LV  VTSV+ L+DPTTL  AEL  D+FWR+P+ PL +  +L EF VLDVEPV
Sbjct:    4 AHLGAILCCLCGKSIQPNSAALCGECLRAEVDITENIQEKGLKVYQCRKCLRWQGKNDHYVPCQLESLELLALCLKRIPGLSKADIVDAAFVWTEPHSMRIKVKLTLKRDVLNGVMLQQEK------VVEFVVQWRQCSDCNREFTNQTWKAVVQVRQRVDHKRTFFYLEQLILAANAQHRAVDIRSLKDGMDFFFAERAHALQFADWLAGVVPQRSTKSKKLVSVDNHSNISNEQLSLRVDIVPLCKGDLVVVPAGGGKGGGAAHLAGCVSLVANVTSVVQLLDPTTLRSAELTPDRFWRSPLTPLASASSLIEFTVLDVEPV 321          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: D7G1R1_ECTSI (60S ribosomal export protein NMD3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1R1_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 1.030e-107
Identity = 172/316 (54.43%), Postives = 221/316 (69.94%), Query Frame = 0
Query:   72 TILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGV-LLQCKKCFRWL-HNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAALVVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVD 385
            TILCCLCG+ IQPNGANMC  CL   VDVTEGI K G+ ++QC++C +WL  N+ W   ELES   LA+ LK+I GL K DLVDA +IWTEPHSKR+KVR TVR+EVLN V +QQ A       VE VV  +QC  C +EF NQTW+A VQ+RQR  HKRT + LEQ +L+ +A + C+ ++  R G+D +F  K  AV F  +L +  P R + + K+VS D+HSNV N QH++AVD+  LCR+DLV LPRGSGN L G   +V RVTSV+  V P++   A++PAD++WR+P  PLL+  +L EFVVLD EP D
Sbjct:   62 TILCCLCGRPIQPNGANMCGACLRDQVDVTEGIPKKGLTIIQCRRCLKWLTKNDHWSGFELESAPFLALVLKKIPGLAKQDLVDAKWIWTEPHSKRLKVRITVRKEVLNKVMLQQDAT------VEFVVHNRQCNVCNKEFTNQTWKAIVQIRQRAGHKRTMMLLEQRILQADAHRKCISVETVRGGMDVYFGAKHDAVEFVGYLSSVAPIRSRESTKLVSTDNHSNVRNTQHTVAVDVPTLCRDDLVALPRGSGNRLQGTITVVQRVTSVVQFVGPSSGQTADMPADRYWRSPPEPLLSASSLTEFVVLDSEPAD 371          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A024UHG0_9STRA (60S ribosomal export protein NMD3 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A024UHG0_9STRA)

HSP 1 Score: 311 bits (796), Expect = 7.370e-98
Identity = 156/322 (48.45%), Postives = 213/322 (66.15%), Query Frame = 0
Query:   66 PKAEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVD 385
            P+ E   ILCC+C   I+ N ANMC  CL   VDVTEGI K  ++ QC+ C +W    QWV  +LES ELLA+CLK+I GLNK  LVDA +IWTEPHSKR+K++ TV++EV+NG  +QQ      S +V  +VR QQC DC   F N +W+A VQVRQ+V+HKRTF +LEQL+L+    +    ++ Q DGVDFFF ++ HA+ F +FL   VP  +K  KK++S D+HSN  N + + AVD+ P+C++DLV LP      L   ++L  V +VTS +H++DP T+ RAE+  DK+WR P   L + K L E+ VLD  P++
Sbjct:    5 PEHELPDILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW-SRPQWVSADLESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQ------SFIVTFIVRNQQCDDCQASFTNHSWKAVVQVRQKVEHKRTFFFLEQLILKHRVHEKTTSIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLTEYTVLDSSPLE 319          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A6G0XWA3_9STRA (60S ribosomal export protein NMD3 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWA3_9STRA)

HSP 1 Score: 307 bits (786), Expect = 2.060e-96
Identity = 154/315 (48.89%), Postives = 211/315 (66.98%), Query Frame = 0
Query:   73 ILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVD 385
            ILCC+C   I+ N ANMC  CL   VDVTEGI K  ++ QC+ C +W    QWV  ELES ELLA+CLK+I GLNK  LVDA +IWTEPHSKR+K++ TV++EV+NG  +QQ      S +V  +VR QQC +C   F N +W+A VQVRQ+V+HKRTF YLEQL+L+    +   +++ Q DGVDFFF ++ HA+ F +FL   VP  +K  KK++S D+HSN  N + + AVD+ P+C++DLV LP      L   ++L  V +VTS +H++DP T+ RAE+  +K+WR P   L + K L E+ VLD  P++
Sbjct:   11 ILCCICAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW-SRPQWVSAELESRELLAICLKKITGLNKVKLVDAGWIWTEPHSKRLKLKLTVQKEVMNGAILQQ------SFIVTFIVRNQQCDECQASFTNHSWKAVVQVRQKVEHKRTFFYLEQLILKHRVHEKTTNIESQPDGVDFFFVERNHALRFVDFLQETVPISLKTAKKLISADNHSNTANYKFTYAVDIAPVCKDDLVALPLKLARQLGNISSLCLVTQVTSSIHVIDPFTMQRAEIENEKYWRYPFKALRSSKQLTEYTVLDSTPME 318          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: W2I7I2_PHYPR (60S ribosomal export protein NMD3 n=9 Tax=Peronosporaceae TaxID=4777 RepID=W2I7I2_PHYPR)

HSP 1 Score: 307 bits (786), Expect = 2.180e-96
Identity = 155/319 (48.59%), Postives = 216/319 (67.71%), Query Frame = 0
Query:   68 AEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 384
            ++  TILCC+C   I  N AN C  CL + VDVTEGI K  ++ QC+ C RW     WV  ELES ELLA+CLK+I+ LN+  L+DA++IWTEPHS+R+K++ TV++EV++ + MQQ      S +V  VVR QQC  C   F NQ+WRA VQVRQRVDHKRTF +LEQL+L+  A +   +++   DGVDFFFS++ HA+ F +FL  +VP +VK  KK++S D+HSN HN + + AV++ P+C++DLV+LP      L   + L  V  VTS +H+VDP T   AE+ ++K+WR P   L ++KA+ +F VLD  P+
Sbjct:    6 SQMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRW-SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVMSKMIMQQ------SFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEIDSEKYWRYPFRALRSIKAMTDFTVLDSNPM 317          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A484E8L1_BRELC (60S ribosomal export protein NMD3 n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E8L1_BRELC)

HSP 1 Score: 306 bits (784), Expect = 4.470e-96
Identity = 154/318 (48.43%), Postives = 215/318 (67.61%), Query Frame = 0
Query:   69 EYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 384
            +  TILCCLC   I  N AN C  CL + VDVTEGI+K  ++ QC+ C RW     WV  ELES ELLA+CLK+I+ LN+  L+DA+++WTEPHS+R+K++ TV++EVL+ + MQQ      S +V  VVR QQC  C   F NQ+WRA VQVRQRVDHKRTF YLEQL+L+  A +    ++   DGVDFFFS++ HA+ F +FL  +VP ++K  KK++S D+HSN HN + + AV++ P+C++DLVVLP      L   + L  V  VTS +H+VDP +   AE+ ++K+WR P   L ++K +++F +LD  P+
Sbjct:    4 QMPTILCCLCATPIVANAANTCVNCLKSQVDVTEGINKEIIIHQCRGCMRW-SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWVWTEPHSRRLKLKLTVQKEVLSKMIMQQ------SFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFYLEQLILKHRAHEKTTTIESHPDGVDFFFSERNHALRFIDFLQESVPMKLKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVVLPLKLARMLGNISCLCLVASVTSSIHVVDPFSTQVAEVDSEKYWRYPFRALRSIKTMSDFTILDSNPM 314          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A316UBA1_9BASI (60S ribosomal export protein NMD3 n=1 Tax=Pseudomicrostroma glucosiphilum TaxID=1684307 RepID=A0A316UBA1_9BASI)

HSP 1 Score: 308 bits (788), Expect = 5.370e-96
Identity = 152/320 (47.50%), Postives = 220/320 (68.75%), Query Frame = 0
Query:   67 KAEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQ-WVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAALVV--RVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEP 383
            K +   +LC  CG +I PN AN+C  CL  +VD+TEGI K   +  CK C R+L+  Q WV  +LES ELLA+CLK++ GLNK  L+DA FIWTEPHSKR++V+ TV++EVL    +QQ         VE VV++ QCPDC R     TW+A+VQVRQ+V HKRTFLYLEQL+L+ NA K  +++  ++DG+DF+F Q++HAV   EFL + VP RV  +  ++SMD HS+  NN+ + +V++ P+C++DLV LP+ +  +L     +V+  R+T+ +  +DP+TL  A++PA+K++R P+ PL  +  L EF+VLD+EP
Sbjct:   11 KLDQGLVLCADCGTAIPPNSANLCISCLRNSVDITEGIPKQATVNFCKNCERYLNPPQSWVLAQLESRELLAICLKKLRGLNKVRLIDAGFIWTEPHSKRLRVKLTVQKEVLVNTILQQVFE------VEYVVQYGQCPDCTRLAAKNTWKAQVQVRQKVPHKRTFLYLEQLILKHNAHKDTINISEKKDGLDFYFVQRSHAVKMCEFLASVVPIRVTASSSVISMDIHSSTSNNKFTYSVEIAPICKDDLVCLPKSTAKALGQLPQVVLCSRITNSIRFLDPSTLHYADIPAEKYFRDPIQPLCAIPELVEFLVLDIEP 324          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: T0RPV6_SAPDV (60S ribosomal export protein NMD3 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0RPV6_SAPDV)

HSP 1 Score: 305 bits (782), Expect = 8.190e-96
Identity = 154/321 (47.98%), Postives = 209/321 (65.11%), Query Frame = 0
Query:   66 PKAEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 384
            P+     ILCC+C   I+ N ANMC  CL   VDVTEGI K  ++ QC+ C +W     WV  ELES ELLA+CLK+I GLNK  LVDA ++WTEPHSKR+K++ TV++EV+NG  +QQ      S +V  +VR QQC +C   F N +W+A VQVRQ+VDHKRTF YLEQL+L+    +    ++   DGVDFFF ++ HA+ F +FL   VP ++K  KK++S D+HSN  N + + AVDL  +C++DLV LP      L   ++L  V +VTS +H++DP T+ RAE+  DK+WR P   L + K L E+ VLD  P+
Sbjct:    5 PEQSLPNILCCMCAVPIKANAANMCVSCLKGQVDVTEGIPKEIIMHQCRGCLKW-SRPPWVAAELESRELLAICLKKISGLNKVKLVDAGWVWTEPHSKRLKLKLTVQKEVMNGAILQQ------SFVVTFIVRNQQCDECQASFTNNSWKAVVQVRQKVDHKRTFFYLEQLILKHRVHEKTSSIESHPDGVDFFFVERNHALRFVDFLSETVPIKLKTAKKLISADNHSNTANYKFTYAVDLATVCKDDLVALPLKLARQLGNISSLCIVTQVTSSIHVIDPFTMQRAEIDNDKYWRYPFKALRSSKQLVEYTVLDSNPL 318          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: D0MSQ0_PHYIT (60S ribosomal export protein NMD3 n=18 Tax=Peronosporaceae TaxID=4777 RepID=D0MSQ0_PHYIT)

HSP 1 Score: 305 bits (781), Expect = 1.290e-95
Identity = 155/319 (48.59%), Postives = 215/319 (67.40%), Query Frame = 0
Query:   68 AEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAAL--VVRVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPV 384
            ++  TILCC+C   I  N AN C  CL + VDVTEGI K  ++ QC+ C RW     WV  ELES ELLA+CLK+I+ LN+  L+DA++IWTEPHS+R+K++ TV++EVL+ + MQQ      S +V  VVR QQC  C   F NQ+WRA VQVRQRVDHKRTF +LEQL+L+  A +   +++   DGVDFFFS++ HA+ F +FL  +VP +VK  KK++S D+HSN HN + + AV++ P+C++DLV+LP      L   + L  V  VTS +H+VDP T   AE+ ++K+WR P   L ++KA+ +  VLD  P+
Sbjct:    6 SQMPTILCCMCATPIVANAANTCVSCLKSQVDVTEGIPKEVIIHQCRGCMRW-SRPPWVAAELESRELLAMCLKKINNLNRVKLIDANWIWTEPHSRRLKLKLTVQKEVLSKMIMQQ------SFVVTFVVRNQQCDACQASFANQSWRAVVQVRQRVDHKRTFFFLEQLILKHRAHEKTTNIESHPDGVDFFFSERNHALRFVDFLQESVPMKVKTAKKLISADNHSNTHNYKFTYAVEIAPVCKDDLVLLPVKLARMLGNMSCLCLVQSVTSSIHVVDPFTTQVAEVDSEKYWRYPFRALRSIKAMTDLTVLDSNPM 317          
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Match: A0A316UYV2_9BASI (60S ribosomal export protein NMD3 n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316UYV2_9BASI)

HSP 1 Score: 306 bits (785), Expect = 1.430e-95
Identity = 154/324 (47.53%), Postives = 221/324 (68.21%), Query Frame = 0
Query:   68 AEYTTILCCLCGKSIQPNGANMCRECLHTNVDVTEGISKTGVLLQCKKCFRWLHNNQ-WVRCELESPELLAVCLKRIHGLNKNDLVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRWQQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDMDPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNNQHSMAVDLVPLCREDLVVLPRGSGNSLSGAAALVV--RVTSVLHLVDPTTLARAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVDPAA 388
            AE   +LC  CG +I PN AN+C  CL  +VD+TEGI K   +  CK C R+L+  Q WV  +LES ELLA+CL+++ GLNK  L+DA FIWTEPHSKR++V+ TV++EVL    +QQ         VE +V++ QCPDC R     TW+A+VQVRQ+V HKRTFLYLEQL+L+ NA K  +++  ++DG+DF+++Q+AHAV   EFL + VP +V  +  ++SMD HS+  NN+ + +V++ P+C++DL+ LP+    SL     LV+  R+T+ + L+DP TL  A++PA+K++R P   L T+  L EF+VLD+EP   AA
Sbjct:   11 AEQGLVLCADCGTAIPPNSANLCLSCLRNSVDITEGIPKQATVNFCKNCERYLNPPQTWVMAQLESRELLAICLRKLRGLNKVRLIDAGFIWTEPHSKRLRVKLTVQKEVLISTILQQIFE------VEYIVQYGQCPDCTRLAAKNTWKAQVQVRQKVPHKRTFLYLEQLILKHNAHKDTINISEKKDGLDFYYTQRAHAVKMCEFLASVVPVKVTSSTSVISMDIHSSTSNNKFTYSVEIAPICKDDLICLPKNVAKSLGQLPQLVLCSRITNSIRLMDPVTLHYADIPAEKYFRDPFQALCTIPELVEFLVLDIEPSTHAA 328          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7033.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CPD6_9STRA3.790e-12056.7960S ribosomal export protein NMD3 n=1 Tax=Tribonem... [more]
D7G1R1_ECTSI1.030e-10754.4360S ribosomal export protein NMD3 n=1 Tax=Ectocarp... [more]
A0A024UHG0_9STRA7.370e-9848.4560S ribosomal export protein NMD3 n=7 Tax=Aphanomy... [more]
A0A6G0XWA3_9STRA2.060e-9648.8960S ribosomal export protein NMD3 n=1 Tax=Aphanomy... [more]
W2I7I2_PHYPR2.180e-9648.5960S ribosomal export protein NMD3 n=9 Tax=Peronosp... [more]
A0A484E8L1_BRELC4.470e-9648.4360S ribosomal export protein NMD3 n=1 Tax=Bremia l... [more]
A0A316UBA1_9BASI5.370e-9647.5060S ribosomal export protein NMD3 n=1 Tax=Pseudomi... [more]
T0RPV6_SAPDV8.190e-9647.9860S ribosomal export protein NMD3 n=4 Tax=Saproleg... [more]
D0MSQ0_PHYIT1.290e-9548.5960S ribosomal export protein NMD3 n=18 Tax=Peronos... [more]
A0A316UYV2_9BASI1.430e-9547.5360S ribosomal export protein NMD3 n=1 Tax=Jaminaea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007064Nmd3, N-terminalPFAMPF04981NMD3coord: 75..308
e-value: 9.1E-66
score: 221.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..32
NoneNo IPR availablePANTHERPTHR12746:SF260S RIBOSOMAL EXPORT PROTEIN NMD3coord: 66..389
IPR039768Ribosomal export protein Nmd3PANTHERPTHR12746NONSENSE-MEDIATED MRNA DECAY PROTEIN 3coord: 66..389

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7033contigP-wetherbeei_contig7033:15..2958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7033.1.2mRNA_P-wetherbeei_contig7033.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7033 15..2958 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7033.1.2 ID=prot_P-wetherbeei_contig7033.1.2|Name=mRNA_P-wetherbeei_contig7033.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=413bp
MLFLGGKETGKNHKGEISNTTPHTQPATSPSGLQTSVSHRVLSVAERTRA
LLSIMATLVEQCSARPKAEYTTILCCLCGKSIQPNGANMCRECLHTNVDV
TEGISKTGVLLQCKKCFRWLHNNQWVRCELESPELLAVCLKRIHGLNKND
LVDASFIWTEPHSKRVKVRATVRREVLNGVNMQQQARTNLSCMVELVVRW
QQCPDCGREFVNQTWRAKVQVRQRVDHKRTFLYLEQLMLRRNAAKMCVDM
DPQRDGVDFFFSQKAHAVAFTEFLLTAVPCRVKVTKKMVSMDSHSNVHNN
QHSMAVDLVPLCREDLVVLPRGSGNSLSGAAALVVRVTSVLHLVDPTTLA
RAELPADKFWRAPVAPLLTVKALAEFVVLDVEPVDPAAASAAAAAAASPA
AAGGGGGGGGRED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007064Nmd3_N
IPR039768Nmd3