prot_P-wetherbeei_contig7022.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7022.3.1
Unique Nameprot_P-wetherbeei_contig7022.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length217
Homology
BLAST of mRNA_P-wetherbeei_contig7022.3.1 vs. uniprot
Match: A0A353LSC3_9PROT (Probable GTP-binding protein EngB n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LSC3_9PROT)

HSP 1 Score: 313 bits (803), Expect = 2.970e-106
Identity = 157/210 (74.76%), Postives = 178/210 (84.76%), Query Frame = 0
Query:    1 PEFDPAVIEAGRVLFAGECEFVRGVVAIDQMPDTDLPEIAFAGRSNVGKSSLINALTNRKTLARTSNTPGRTREINFFNLAGRLMLADLPGYGYARVPKAQVEVWTRLVNTYLRGRPSLRRACVLIDARHGVKESDVQVMKMLDAAAVSYQIVLTKADKVKAADLANCLDRTKTLLRTHVAAHPEVHVTSSEKGDGIAELRAALGDLAAP 210
            PEFD    EAGR+LFA  C+FV G V +  +P  DLPEIAFAGRSNVGKSSLINALTNRKTLARTSNTPGRT+EINFFNLAGRLMLADLPGYGYARV + QVE WTRL+N YL+GRP+LRRACVLID+RHG+K+SD+ VMKMLD AAVSYQIVLTKADK KA +L   ++R +  +R HVAAHPE+HVTS+ KG GIAELRAAL +LA P
Sbjct:    5 PEFDDTACEAGRLLFAQSCDFVMGAVDMRHLPAPDLPEIAFAGRSNVGKSSLINALTNRKTLARTSNTPGRTQEINFFNLAGRLMLADLPGYGYARVSRTQVERWTRLINQYLKGRPNLRRACVLIDSRHGLKDSDIAVMKMLDVAAVSYQIVLTKADKPKAVELTAQIERVRKAMRAHVAAHPEIHVTSAAKGTGIAELRAALAELALP 214          
BLAST of mRNA_P-wetherbeei_contig7022.3.1 vs. uniprot
Match: A0A3C0TUV8_9PROT (Probable GTP-binding protein EngB n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TUV8_9PROT)

HSP 1 Score: 299 bits (766), Expect = 2.790e-100
Identity = 156/214 (72.90%), Postives = 174/214 (81.31%), Query Frame = 0
Query:    1 PEFDPAVIEAGRVLFAGECEFVRGVVAIDQM---PDTDLPEIAFAGRSNVGKSSLINALTNRKTLARTSNTPGRTREINFFNLAGRLMLADLPGYGYARVPKAQVEVWTRLVNTYLRGRPSLRRACVLIDARHGVKESDVQVMKMLDAAAVSYQIVLTKADKVKAADLANCLDRTKTLLRTHVAAHPEVHVTSSEKGDGIAELRAALGDLAAPK 211
            P+     +EAGR+LFAG C+FV GV  I QM   P   LPEIAFAGRSNVGKSSLINALT RKTLARTSNTPGRT++INFFNLAGRLMLADLPGYGYAR P+A    W RL   YLRGRP LRR C+LIDARHG+KESD++ MKMLDAAAVSYQIVLTKADKVK ADLA C  +T++LLR H A++P V +TSSE G GIAELRAALG+LAA K
Sbjct:   25 PDVSDEALEAGRILFAGPCDFVLGVADIAQMDLLPAAALPEIAFAGRSNVGKSSLINALTGRKTLARTSNTPGRTQQINFFNLAGRLMLADLPGYGYARAPRAVAAGWRRLAQKYLRGRPGLRRVCLLIDARHGIKESDIESMKMLDAAAVSYQIVLTKADKVKPADLAACHQKTQSLLRGHTASYPVVQITSSETGAGIAELRAALGELAAEK 238          
BLAST of mRNA_P-wetherbeei_contig7022.3.1 vs. uniprot
Match: UPI00040675AE (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI00040675AE)

HSP 1 Score: 269 bits (687), Expect = 1.360e-88
Identity = 137/203 (67.49%), Postives = 162/203 (79.80%), Query Frame = 0
Query:    6 AVIEAGRVLFAGECEFVRGVVAIDQMPDTDLPEIAFAGRSNVGKSSLINALTNRKTLARTSNTPGRTREINFFNLAGRLMLADLPGYGYARVPKAQVEVWTRLVNTYLRGRPSLRRACVLIDARHGVKESDVQVMKMLDAAAVSYQIVLTKADKVKAADLANCLDRTKTLLRTHVAAHPEVHVTSSEKGDGIAELRAALGDLA 208
            A IEAGR+LFA  C+FV G   +DQ+PD  LPE+AFAGRSNVGKSSLINALT RKTLARTSNTPGRT+++NFF+L GRL L D+PGYGYA+  K +VE WT +V  +L+GR +LRRACVLID+RHG+K +D ++M MLD AAV YQ+VLTKADKVK A+L     RT   L+ H AA PEVHVTSSEKG+GI ELRAAL  LA
Sbjct:   14 AEIEAGRLLFARPCDFVWGAATLDQIPDASLPEVAFAGRSNVGKSSLINALTGRKTLARTSNTPGRTQQLNFFDLGGRLRLVDMPGYGYAKESKEKVEAWTDMVRRFLKGRVTLRRACVLIDSRHGLKPNDHEIMTMLDQAAVPYQVVLTKADKVKPAELDAVRARTAADLKKHPAAFPEVHVTSSEKGEGIPELRAALATLA 216          
BLAST of mRNA_P-wetherbeei_contig7022.3.1 vs. uniprot
Match: A0A2G2QTX4_9PROT (Probable GTP-binding protein EngB n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2G2QTX4_9PROT)

HSP 1 Score: 269 bits (687), Expect = 1.460e-88
Identity = 136/206 (66.02%), Postives = 164/206 (79.61%), Query Frame = 0
Query:    3 FDPAVIEAGRVLFAGECEFVRGVVAIDQMPDTDLPEIAFAGRSNVGKSSLINALTNRKTLARTSNTPGRTREINFFNLAGRLMLADLPGYGYARVPKAQVEVWTRLVNTYLRGRPSLRRACVLIDARHGVKESDVQVMKMLDAAAVSYQIVLTKADKVKAADLANCLDRTKTLLRTHVAAHPEVHVTSSEKGDGIAELRAALGDLA 208
            FD   IEAGR+LFA E  F+ GV  +DQ+P+TDLPEIAFAGRSNVGKSSL+NALT RK+LAR S+TPGRT++INFF+L  RLMLAD+PGYGYAR P  ++E WTRLVN YL+GRP L+R  VLIDARHG+K+ D +VMKMLD AAVSYQ++LTK DKVKAA L   L++    L  HVAA+P +  TSS+K  GIAELRA + +LA
Sbjct:   13 FDEQQIEAGRILFAQESTFMLGVAGLDQVPETDLPEIAFAGRSNVGKSSLVNALTGRKSLARMSHTPGRTQQINFFDLGKRLMLADMPGYGYARAPLDEIEKWTRLVNAYLKGRPQLKRVFVLIDARHGLKDVDHKVMKMLDGAAVSYQVILTKVDKVKAAQLEKVLEKVHAELARHVAAYPIIRCTSSQKKMGIAELRAEIAELA 218          
BLAST of mRNA_P-wetherbeei_contig7022.3.1 vs. uniprot
Match: A0A2S6UE28_9PROT (Probable GTP-binding protein EngB n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6UE28_9PROT)

HSP 1 Score: 269 bits (688), Expect = 1.540e-88
Identity = 136/203 (67.00%), Postives = 159/203 (78.33%), Query Frame = 0
Query:    8 IEAGRVLFAGECEFVRGVVAIDQMPDTDLPEIAFAGRSNVGKSSLINALTNRKTLARTSNTPGRTREINFFNLAGRLMLADLPGYGYARVPKAQVEVWTRLVNTYLRGRPSLRRACVLIDARHGVKESDVQVMKMLDAAAVSYQIVLTKADKVKAADLANCLDRTKTLLRTHVAAHPEVHVTSSEKGDGIAELRAALGDLAAP 210
            +E GR+LFA +C+F+ G   ++Q+P ++LPEIAFAGRSNVGKSSLINALT R TLARTSNTPGRTR++NFF+L GRLMLADLPGYGYAR PK ++  WT L+  YLRGR  LRR C+LIDARHG+K +D QVMK+LD AAV YQ+VLTK DKVK A L        T L  H AAHPE+ VTS+ KG GIAELRAAL  LAAP
Sbjct:   20 LEQGRLLFAKQCDFILGATNMNQVPVSELPEIAFAGRSNVGKSSLINALTGRNTLARTSNTPGRTRQVNFFDLGGRLMLADLPGYGYARAPKTEIAQWTTLIEDYLRGRVGLRRVCLLIDARHGIKATDNQVMKLLDQAAVVYQVVLTKCDKVKKAPLQARQKEVSTTLAGHTAAHPEIIVTSARKGHGIAELRAALTSLAAP 222          
BLAST of mRNA_P-wetherbeei_contig7022.3.1 vs. uniprot
Match: UPI001AE8C831 (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Azospirillum soli TaxID=1304799 RepID=UPI001AE8C831)

HSP 1 Score: 268 bits (686), Expect = 2.140e-88
Identity = 136/206 (66.02%), Postives = 164/206 (79.61%), Query Frame = 0
Query:    3 FDPAVIEAGRVLFAGECEFVRGVVAIDQMPDTDLPEIAFAGRSNVGKSSLINALTNRKTLARTSNTPGRTREINFFNLAGRLMLADLPGYGYARVPKAQVEVWTRLVNTYLRGRPSLRRACVLIDARHGVKESDVQVMKMLDAAAVSYQIVLTKADKVKAADLANCLDRTKTLLRTHVAAHPEVHVTSSEKGDGIAELRAALGDLA 208
            F+   +EAGR+LFA EC+FV G   +DQ+P+ DLPEIAFAGRSNVGKSSL+NALT RKTLARTSNTPGRT+++NFFNL GRL L D+PGYGYA+  K +VE W  +V  +L+GR +LRRA VLID+RHG+K +D ++MKMLD AAV Y +VLTKADKVKA  L   + RT+  L+ H AA PEVHVTSSEKG GIAELRA+L  LA
Sbjct:   13 FNEEALEAGRLLFAKECDFVWGAQTLDQIPEADLPEIAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQQLNFFNLGGRLKLVDMPGYGYAKESKEKVEAWNDMVRRFLKGRVTLRRALVLIDSRHGLKPNDDEIMKMLDQAAVPYVVVLTKADKVKATALDEVVKRTQAGLKKHPAAFPEVHVTSSEKGMGIAELRASLAQLA 218          
BLAST of mRNA_P-wetherbeei_contig7022.3.1 vs. uniprot
Match: A0A2D9EYY3_9PROT (Probable GTP-binding protein EngB n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D9EYY3_9PROT)

HSP 1 Score: 268 bits (686), Expect = 2.450e-88
Identity = 138/204 (67.65%), Postives = 160/204 (78.43%), Query Frame = 0
Query:    7 VIEAGRVLFAGECEFVRGVVAIDQMPDTDLPEIAFAGRSNVGKSSLINALTNRKTLARTSNTPGRTREINFFNLAGRLMLADLPGYGYARVPKAQVEVWTRLVNTYLRGRPSLRRACVLIDARHGVKESDVQVMKMLDAAAVSYQIVLTKADKVKAADLANCLDRTKTLLRTHVAAHPEVHVTSSEKGDGIAELRAALGDLAAP 210
            ++E GR+LFA E  F+ G  ++ Q+PD  LPE+AFAGRSNVGKSSLINALT RK LARTSNTPGRT++INFF+L  RLMLADLPGYGYA+ PK QV  WTRLVN+YLRGR  LRR CVLIDARHG+KE+D ++MKMLDAAA +YQIVLTK DK+KAADL   ++RT   L  H AAHP +  TSS K  GI ELRA L  LA P
Sbjct:   21 LLENGRLLFAKEATFLLGAASLSQVPDGPLPEVAFAGRSNVGKSSLINALTGRKDLARTSNTPGRTQQINFFDLGERLMLADLPGYGYAKAPKGQVMNWTRLVNSYLRGRQELRRTCVLIDARHGLKETDREIMKMLDAAAQAYQIVLTKCDKIKAADLDKLIERTSAELAKHTAAHPVIMRTSSFKSQGIEELRAELAALALP 224          
BLAST of mRNA_P-wetherbeei_contig7022.3.1 vs. uniprot
Match: A0A2E6QFD7_9PROT (Probable GTP-binding protein EngB n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QFD7_9PROT)

HSP 1 Score: 268 bits (685), Expect = 4.120e-88
Identity = 131/209 (62.68%), Postives = 164/209 (78.47%), Query Frame = 0
Query:    6 AVIEAGRVLFAGECEFVRGVVAIDQMPDTDLPEIAFAGRSNVGKSSLINALTNRKTLARTSNTPGRTREINFFNLAGRLMLADLPGYGYARVPKAQVEVWTRLVNTYLRGRPSLRRACVLIDARHGVKESDVQVMKMLDAAAVSYQIVLTKADKVKAADLANCLDRTKTLLRTHVAAHPEVHVTSSEKGDGIAELRAALGDLAAPKSET 214
            A +EAGR+LFA  C FV    +++ +P T LPEIAFAGRSNVGKSSLINA+T +  LARTSNTPGRT+++NFF+L  RL+L DLPGYGYA+  K ++ VWTRL+  YLRGRP+LRR C+LIDARHGVK+SD Q+M MLD AAVS+Q+VLTK DK+   D A  LD+T++ +  HVAAHPEV  TS++ G GI ELRAAL  LA P+S++
Sbjct:   17 AALEAGRLLFAAPCRFVAAAASLESLPPTSLPEIAFAGRSNVGKSSLINAVTGQTKLARTSNTPGRTQQLNFFSLDQRLLLVDLPGYGYAKAAKTKIRVWTRLIRDYLRGRPTLRRVCILIDARHGVKDSDEQIMAMLDEAAVSFQVVLTKCDKLSRDDFAARLDQTRSQVARHVAAHPEVMATSAQSGAGIPELRAALATLAVPRSDS 225          
BLAST of mRNA_P-wetherbeei_contig7022.3.1 vs. uniprot
Match: UPI001A10902B (YihA family ribosome biogenesis GTP-binding protein n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI001A10902B)

HSP 1 Score: 264 bits (675), Expect = 1.150e-86
Identity = 137/205 (66.83%), Postives = 157/205 (76.59%), Query Frame = 0
Query:    4 DPAVIEAGRVLFAGECEFVRGVVAIDQMPDTDLPEIAFAGRSNVGKSSLINALTNRKTLARTSNTPGRTREINFFNLAGRLMLADLPGYGYARVPKAQVEVWTRLVNTYLRGRPSLRRACVLIDARHGVKESDVQVMKMLDAAAVSYQIVLTKADKVKAADLANCLDRTKTLLRTHVAAHPEVHVTSSEKGDGIAELRAALGDLA 208
            D   +EAGR+LFA EC FV GV  ID +P  +LPEIAFAGRSNVGKSSLINALT RKTLARTSNTPGRT+++NFFNL GRL + DLPGYGYA+ PK +V+ W RL+  YL+GR  LRR CVLIDARHG+K SD QVM MLD +AV YQIVLTK DKVKAAD A   D     +R   AA+PE+  TS+ KG GI ELRAAL +LA
Sbjct:   15 DEGALEAGRLLFAKECTFVMGVARIDDLPADELPEIAFAGRSNVGKSSLINALTGRKTLARTSNTPGRTQQLNFFNLGGRLTIVDLPGYGYAKAPKGEVDRWNRLIRKYLKGRVGLRRLCVLIDARHGLKVSDRQVMDMLDESAVVYQIVLTKTDKVKAADRAMRRDEITAEIRKRAAANPEIMATSAVKGVGIPELRAALTELA 219          
BLAST of mRNA_P-wetherbeei_contig7022.3.1 vs. uniprot
Match: UPI0018692D4C (ribosome biogenesis GTP-binding protein YihA/YsxC n=1 Tax=Nisaea sediminum TaxID=2775867 RepID=UPI0018692D4C)

HSP 1 Score: 263 bits (673), Expect = 1.500e-86
Identity = 133/208 (63.94%), Postives = 161/208 (77.40%), Query Frame = 0
Query:    2 EFDPAVIEAGRVLFAGECEFVRGVVAIDQMPDTDLPEIAFAGRSNVGKSSLINALTNRKTLARTSNTPGRTREINFFNLAGRLMLADLPGYGYARVPKAQVEVWTRLVNTYLRGRPSLRRACVLIDARHGVKESDVQVMKMLDAAAVSYQIVLTKADKVKAADLANCLDRTKTLLRTHVAAHPEVHVTSSEKGDGIAELRAALGDLAA 209
            E DP  +EAGR+LFA EC FV G   +DQ+PD  LPEIAFAGRSNVGKSSL+NALT RKTLARTSNTPGRT+++NFF+L GRLM+ DLPGYGYA+V K QV  W  ++  YL+G   L+R  +LID+RHG+K++D ++M MLD AAVSYQ+VLTK DK K A+L   +  T+  LRTHVAAHP +  TS+EKG GI ELRAAL  LAA
Sbjct:    4 ELDPEALEAGRLLFAQECRFVWGAARLDQLPDAGLPEIAFAGRSNVGKSSLVNALTGRKTLARTSNTPGRTQQLNFFDLGGRLMIVDLPGYGYAKVSKTQVAAWNHVLRHYLKGSTVLQRVLLLIDSRHGLKDTDREMMDMLDQAAVSYQVVLTKVDKPKKAELEKVIADTEAELRTHVAAHPIIVRTSAEKGTGIPELRAALAALAA 211          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7022.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A353LSC3_9PROT2.970e-10674.76Probable GTP-binding protein EngB n=4 Tax=Alphapro... [more]
A0A3C0TUV8_9PROT2.790e-10072.90Probable GTP-binding protein EngB n=1 Tax=Alphapro... [more]
UPI00040675AE1.360e-8867.49ribosome biogenesis GTP-binding protein YihA/YsxC ... [more]
A0A2G2QTX4_9PROT1.460e-8866.02Probable GTP-binding protein EngB n=1 Tax=Rhodospi... [more]
A0A2S6UE28_9PROT1.540e-8867.00Probable GTP-binding protein EngB n=2 Tax=Alphapro... [more]
UPI001AE8C8312.140e-8866.02ribosome biogenesis GTP-binding protein YihA/YsxC ... [more]
A0A2D9EYY3_9PROT2.450e-8867.65Probable GTP-binding protein EngB n=1 Tax=Rhodospi... [more]
A0A2E6QFD7_9PROT4.120e-8862.68Probable GTP-binding protein EngB n=1 Tax=Rhodospi... [more]
UPI001A10902B1.150e-8666.83YihA family ribosome biogenesis GTP-binding protei... [more]
UPI0018692D4C1.500e-8663.94ribosome biogenesis GTP-binding protein YihA/YsxC ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019987GTP-binding protein, ribosome biogenesis, YsxCTIGRFAMTIGR03598TIGR03598coord: 19..204
e-value: 8.6E-69
score: 228.9
IPR019987GTP-binding protein, ribosome biogenesis, YsxCHAMAPMF_00321GTPase_EngBcoord: 24..208
score: 27.822723
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 11..215
e-value: 4.2E-58
score: 198.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 31..208
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 38..156
e-value: 3.0E-21
score: 75.6
NoneNo IPR availablePIRSRPIRSR006230-1PIRSR006230-1coord: 39..92
e-value: 2.1E-11
score: 41.4
NoneNo IPR availablePIRSRPIRSR006809-2PIRSR006809-2coord: 33..64
e-value: 1.5E-4
score: 18.6
NoneNo IPR availablePIRSRPIRSR006809-1PIRSR006809-1coord: 33..64
e-value: 1.5E-4
score: 18.6
NoneNo IPR availablePANTHERPTHR11649MSS1/TRME-RELATED GTP-BINDING PROTEINcoord: 19..208
NoneNo IPR availablePANTHERPTHR11649:SF13GTP-BINDING PROTEIN ENGB-RELATEDcoord: 19..208
IPR030393EngB-type guanine nucleotide-binding (G) domainPROSITEPS51706G_ENGBcoord: 35..210
score: 43.996723
IPR030393EngB-type guanine nucleotide-binding (G) domainCDDcd01876YihA_EngBcoord: 38..208
e-value: 4.44129E-86
score: 250.12

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7022contigP-wetherbeei_contig7022:2213..2863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7022.3.1mRNA_P-wetherbeei_contig7022.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7022 2213..2863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7022.3.1 ID=prot_P-wetherbeei_contig7022.3.1|Name=mRNA_P-wetherbeei_contig7022.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=217bp
PEFDPAVIEAGRVLFAGECEFVRGVVAIDQMPDTDLPEIAFAGRSNVGKS
SLINALTNRKTLARTSNTPGRTREINFFNLAGRLMLADLPGYGYARVPKA
QVEVWTRLVNTYLRGRPSLRRACVLIDARHGVKESDVQVMKMLDAAAVSY
QIVLTKADKVKAADLANCLDRTKTLLRTHVAAHPEVHVTSSEKGDGIAEL
RAALGDLAAPKSETSI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019987GTP-bd_ribosome_bio_YsxC
IPR027417P-loop_NTPase
IPR006073GTP-bd
IPR030393G_ENGB_dom