prot_P-wetherbeei_contig7017.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig7017.1.1
Unique Nameprot_P-wetherbeei_contig7017.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length94
Homology
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: D8LCN1_ECTSI (Breast cancer 2 like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN1_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 3.390e-23
Identity = 48/90 (53.33%), Postives = 62/90 (68.89%), Query Frame = 0
Query:    1 MRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYS 90
            +R G D  L TP+WV NH RW++WKLA +ER  P  + G  L    L RQL+ RY VE++++ K  +KAVLQGDA AA  MVLCVSR+Y+
Sbjct: 2829 LRSGRDGQLATPIWVQNHTRWIVWKLAAMERRFPEHFPGGYLTAGRLARQLQYRYGVELDRAKKPCLKAVLQGDASAARPMVLCVSRVYT 2918          
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A5P1E9X0_ASPOF (Uncharacterized protein n=2 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1E9X0_ASPOF)

HSP 1 Score: 97.1 bits (240), Expect = 1.890e-21
Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 0
Query:    4 GADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLPRP 94
            GA     T  WVANH +W++WKLA LER +P +  G+ L  S  L +L+ RYE E+N   +SAIK +L GD+  AS MVLC+S IYS P P
Sbjct:  730 GASPSTATKEWVANHYKWIVWKLACLERCYPAKASGKFLTMSNALEELKYRYEREVNYGHRSAIKRILDGDSSPASMMVLCISSIYSSPSP 820          
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A0E0JEH0_ORYPU (Tower domain-containing protein n=2 Tax=Oryza punctata TaxID=4537 RepID=A0A0E0JEH0_ORYPU)

HSP 1 Score: 95.9 bits (237), Expect = 4.840e-21
Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 0
Query:    1 MRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 92
            + CGA     T  WV+NH +W++WKLA LER +P R  G+ L+   +L +L+ RY+ E+N   +SAIK +L+G+A  +  MVLC+S IYS P
Sbjct:  938 LACGASLTYATKEWVSNHYKWIVWKLASLERCYPTRAAGKFLKVGNVLEELKYRYDREVNNGHRSAIKKILEGNASPSLMMVLCISAIYSCP 1029          
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A0E0MRS3_ORYRU (Tower domain-containing protein n=36 Tax=Oryza TaxID=4527 RepID=A0A0E0MRS3_ORYRU)

HSP 1 Score: 95.5 bits (236), Expect = 6.600e-21
Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 0
Query:    1 MRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 92
            + CGA     T  WV+NH +W++WKLA LER +P R  G+ L+   +L +L+ RY+ E+N   +SAIK +L+G+A  +  MVLC+S IYS P
Sbjct:  939 LACGASLTYTTKEWVSNHYKWIVWKLASLERCYPTRAAGKFLKVGNVLEELKYRYDREVNNGHRSAIKKILEGNASPSLMMVLCISAIYSCP 1030          
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A6G1E751_9ORYZ (Tower domain-containing protein n=1 Tax=Oryza meyeriana var. granulata TaxID=110450 RepID=A0A6G1E751_9ORYZ)

HSP 1 Score: 95.1 bits (235), Expect = 9.010e-21
Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 0
Query:    1 MRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 92
            + CGA     T  WV+NH +W++WKLA LER +P R  G+ L+   +L +L+ RY+ E+N   +SAIK +L+G+A  +  MVLC+S IYS P
Sbjct:  911 LTCGASLTYTTKEWVSNHYKWIVWKLASLERCYPTRAAGKFLKVGNVLEELKYRYDREVNNGHRSAIKKILEGNASPSLMMVLCISAIYSSP 1002          
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A0D9UX45_9ORYZ (Tower domain-containing protein n=2 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9UX45_9ORYZ)

HSP 1 Score: 94.7 bits (234), Expect = 1.230e-20
Identity = 41/92 (44.57%), Postives = 61/92 (66.30%), Query Frame = 0
Query:    1 MRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 92
            + CGA     T  WV+NH +W++WKLA LER +P R  G+ L+   +L +L+ RY+ E+N   +SA+K +L+G+A  +  MVLC+S IYS P
Sbjct:  969 LACGASLTYATKEWVSNHYKWIVWKLASLERCYPTRAPGKFLKIGNVLEELKYRYDREVNNGHRSAVKKILEGNASPSLMMVLCISTIYSCP 1060          
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: UPI0019D5A2C3 (protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-like isoform X3 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D5A2C3)

HSP 1 Score: 94.7 bits (234), Expect = 1.230e-20
Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 0
Query:    1 MRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 92
            +RCGA     T  WV+NH +W++WKLA LER +P R  G+ L    +  +L+ RY+ E+N   +SAIK +L+G+A  +  MVLC+S IYS P
Sbjct:  958 LRCGASLSYATKEWVSNHYKWIVWKLASLERCYPTRAAGKFLTVDNVFEELKYRYDREVNHGHRSAIKKILEGNASPSLMMVLCISAIYSCP 1049          
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A835BQN6_9POAL (Tower domain-containing protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835BQN6_9POAL)

HSP 1 Score: 94.7 bits (234), Expect = 1.230e-20
Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 0
Query:    1 MRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 92
            +RCGA     T  WV+NH +W++WKLA LER +P R  G+ L    +  +L+ RY+ E+N   +SAIK +L+G+A  +  MVLC+S IYS P
Sbjct:  961 LRCGASLSYATKGWVSNHYKWIVWKLASLERCYPTRVAGKFLTVDNVFEELKYRYDREVNHGHRSAIKRILEGNASPSLMMVLCISAIYSCP 1052          
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A1D6J348_MAIZE (Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6J348_MAIZE)

HSP 1 Score: 93.2 bits (230), Expect = 1.750e-20
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 0
Query:    1 MRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 92
            + CGA     T  WV+NH +W++WKLA LER +P R  G+ L    +L +L+ RY+ E+N   +SAIK +L+G++  +  MVLC+S IYS P
Sbjct:   72 LTCGASLSCATKEWVSNHYKWIVWKLASLERCYPTRVAGKFLTVDNVLEELKYRYDREVNHGHRSAIKKILEGNSSPSLMMVLCISAIYSCP 163          
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Match: A0A109NDH2_SORBI (Tower domain-containing protein (Fragment) n=11 Tax=Sorghum bicolor TaxID=4558 RepID=A0A109NDH2_SORBI)

HSP 1 Score: 94.0 bits (232), Expect = 2.260e-20
Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 0
Query:    1 MRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQLRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLP 92
            + CGA     T  WV+NH +W++WKLA LER +P R  G+ L    +L +L+ RY+ E+N   +SAIK +L+G+A  +  MVLC+S IYS P
Sbjct:  373 LTCGASLSCATKEWVSNHYKWIVWKLASLERCYPSRAAGKFLTVDNVLEELKYRYDREVNHGHRSAIKKILEGNASPSLMMVLCISAIYSCP 464          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig7017.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCN1_ECTSI3.390e-2353.33Breast cancer 2 like n=1 Tax=Ectocarpus siliculosu... [more]
A0A5P1E9X0_ASPOF1.890e-2150.55Uncharacterized protein n=2 Tax=Asparagus officina... [more]
A0A0E0JEH0_ORYPU4.840e-2145.65Tower domain-containing protein n=2 Tax=Oryza punc... [more]
A0A0E0MRS3_ORYRU6.600e-2145.65Tower domain-containing protein n=36 Tax=Oryza Tax... [more]
A0A6G1E751_9ORYZ9.010e-2145.65Tower domain-containing protein n=1 Tax=Oryza meye... [more]
A0A0D9UX45_9ORYZ1.230e-2044.57Tower domain-containing protein n=2 Tax=Leersia pe... [more]
UPI0019D5A2C31.230e-2045.65protein BREAST CANCER SUSCEPTIBILITY 2 homolog B-l... [more]
A0A835BQN6_9POAL1.230e-2045.65Tower domain-containing protein n=2 Tax=Digitaria ... [more]
A0A1D6J348_MAIZE1.750e-2044.57Protein BREAST CANCER SUSCEPTIBILITY 2 homolog B n... [more]
A0A109NDH2_SORBI2.260e-2045.65Tower domain-containing protein (Fragment) n=11 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015252Breast cancer type 2 susceptibility protein, helical domainPFAMPF09169BRCA-2_helicalcoord: 4..62
e-value: 7.5E-16
score: 58.3
IPR015525Breast cancer type 2 susceptibility proteinPANTHERPTHR11289BREAST CANCER TYPE 2 SUSCEPTIBILITY PROTEIN BRCA2coord: 3..91
IPR036315BRCA2 helical domain superfamilySUPERFAMILY81872BRCA2 helical domaincoord: 3..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig7017contigP-wetherbeei_contig7017:99..380 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig7017.1.1mRNA_P-wetherbeei_contig7017.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig7017 99..404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig7017.1.1 ID=prot_P-wetherbeei_contig7017.1.1|Name=mRNA_P-wetherbeei_contig7017.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=94bp
MRCGADAVLCTPLWVANHLRWVIWKLAGLERSHPMRYGGRVLRRSALLRQ
LRCRYEVEINQSAKSAIKAVLQGDAGAASFMVLCVSRIYSLPRP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015252BRCA2_hlx
IPR015525BRCA2
IPR036315BRCA2_hlx_sf