prot_P-wetherbeei_contig701.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig701.1.1
Unique Nameprot_P-wetherbeei_contig701.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length349
Homology
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BLAST of mRNA_P-wetherbeei_contig701.1.1 vs. uniprot
Match: A0A835YHS2_9STRA (DHC_N2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHS2_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.560e-27
Identity = 122/339 (35.99%), Postives = 159/339 (46.90%), Query Frame = 0 
Query:    3 GALEDGVDMCRQELADLDGAAEMFAGDATCLAVVAAGGAH-LPHPLRAALLRR---------VRGAVGTASKDGVGGRQSVWGGGCGGYGGASFFEAGAGGSSSSQ--------LGLERFCFEQFVAGSLTNVMQLEEWSLAGLGSNSGGGSGRRNSAGGAAIAKGLNRAGA--LPFHPAFLDAAVLTLVTDKWPLLVDPEGVAERWLPTVYGAALVLPPVVAARATSTEVRHAAAAGLVLVVSHAQAGLHPDLALFLSHHAVAXXXXXXXXXENWAASMAATAAPGFRIVLLSDRTP----GPRREPFAVESSDADAPAVVPLEACPAAAAAVQVIHF 317
            GAL D V MC QEL+D+  AA ++AGDA     + AGGA  LP   RAAL R           RG    +S+   GG             G S   A   G +S +        +   R     F  G+LT V Q++ W+ A   +++   SG   +A  A +  G   + A  LPFHPAF+DAA+LTL T   PLLVDP GVA RWL   Y  + +LPPV AAR  ++ +  AA  G VL+VS  +AG+H  L  FL+   V               S  A    GF++VLL+   P    G                A+  + +CPAA AAVQVI F
Sbjct: 5243 GALRDAVAMCAQELSDIAAAARVYAGDAAVFCALLAGGAAALP---RAALRRAQXXXXXXXXARGCP-VSSRSSSGGXXXXXX-----XXGGSMLPADTDGDTSVEDAEVPDEVMPAARLALHDFCTGALTGVQQVQVWATASY-ADATAASGAAAAADAATLPFGAPTSAAFGLPFHPAFVDAALLTLGTPLVPLLVDPRGVALRWLSKAYQGSALLPPVPAARVVASLLADAARHGRVLLVSAVEAGVHAHLTHFLAARTVLGPC---------GGSGGALPHQGFKLVLLARAVPHVDSGXXXXXXXXXXXXXXXXALQQIGSCPAAMAAVQVIRF 5562
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig701.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YHS2_9STRA3.560e-2735.99DHC_N2 domain-containing protein n=1 Tax=Tribonema... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 152..283
e-value: 2.6E-5
score: 25.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig701contigP-wetherbeei_contig701:12..1280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig701.1.1mRNA_P-wetherbeei_contig701.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig701 12..1280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig701.1.1 ID=prot_P-wetherbeei_contig701.1.1|Name=mRNA_P-wetherbeei_contig701.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=349bp
MGGALEDGVDMCRQELADLDGAAEMFAGDATCLAVVAAGGAHLPHPLRAA
LLRRVRGAVGTASKDGVGGRQSVWGGGCGGYGGASFFEAGAGGSSSSQLG
LERFCFEQFVAGSLTNVMQLEEWSLAGLGSNSGGGSGRRNSAGGAAIAKG
LNRAGALPFHPAFLDAAVLTLVTDKWPLLVDPEGVAERWLPTVYGAALVL
PPVVAARATSTEVRHAAAAGLVLVVSHAQAGLHPDLALFLSHHAVAGGGG
GGGGSENWAASMAATAAPGFRIVLLSDRTPGPRREPFAVESSDADAPAVV
PLEACPAAAAAVQVIHFGGHDRVSGGAAAAAAAATISEKDSNGSNTGNS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase