prot_P-wetherbeei_contig6944.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6944.1.1
Unique Nameprot_P-wetherbeei_contig6944.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length564
Homology
BLAST of mRNA_P-wetherbeei_contig6944.1.1 vs. uniprot
Match: A0A4D9D447_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D447_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.250e-20
Identity = 90/242 (37.19%), Postives = 111/242 (45.87%), Query Frame = 0
Query:  196 LAVPRTCAAAAVDRFGCGLIVGGWDGARPLAAVER-------CRRRXXXXXPLAAMD---AASAATGAPPALAALELVWEQLPPLREARCFPAAAFDTAGRAYALGGGGGPLVGASVMASIEVLARDDAHGLGSCSSSGRRACSSGGACCGSLAGDDASLAWRPGPPMLEPRCGLAAAVCPASGLIYAVGGFGGGRNYLSSAEVLNP-----ATERWTP--APSMAHRRTGFGLAWGPDGGL 420
            L + R+    A D+     +VGGW G+  L +VER        +        +A  D     S+ +G P      E +W  L PL  ARCF A+  D  GR YALGGG     GA V+ S E++    A                             ++ WRPGP M++ RCGLAAA   A G IYAVGG+GGG  YLSS EVL       AT  W       M   RTGFGLA+GPDG L
Sbjct:   32 LQMERSAPGVARDQEDGLWVVGGWSGSEALKSVERLGVDSRTAQEGGMREHRVAKEDLVTGGSSWSGMP----RRERMWTSLQPLETARCFLASVTDLQGRLYALGGGESIWQGARVLKSTEIMEEPLAR---------------------------LTMPWRPGPCMVKARCGLAAAASIA-GDIYAVGGYGGGTTYLSSVEVLRAGDSEGATREWLVDVVRPMHVARTGFGLAFGPDGCL 241          
BLAST of mRNA_P-wetherbeei_contig6944.1.1 vs. uniprot
Match: W7T4D3_9STRA (Kelch-like protein diablo n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4D3_9STRA)

HSP 1 Score: 102 bits (253), Expect = 2.380e-19
Identity = 88/242 (36.36%), Postives = 110/242 (45.45%), Query Frame = 0
Query:  196 LAVPRTCAAAAVDRFGCGLIVGGWDGARPLAAVER-------CRRRXXXXXPLAAMD---AASAATGAPPALAALELVWEQLPPLREARCFPAAAFDTAGRAYALGGGGGPLVGASVMASIEVLARDDAHGLGSCSSSGRRACSSGGACCGSLAGDDASLAWRPGPPMLEPRCGLAAAVCPASGLIYAVGGFGGGRNYLSSAEVLNP-----ATERWTP--APSMAHRRTGFGLAWGPDGGL 420
            L + R+    A D+     +VGGW G+  L +VER        +        +A  D     S+ +G P      E +W  L PL  ARCF A+  D  GR YALGGG     GA V+ S E++    A                             ++ WRPGP M++ RCGLAAA    +G IYA GG+GGG  YLSS EVL       AT  W       M   RTGFGLA+GPDG L
Sbjct:  169 LQMERSAPGVARDQEDGLWVVGGWSGSEALKSVERLGVDPRTAQEGGMREHRVAKEDLVTGGSSWSGMP----RRERMWTSLQPLETARCFLASVTDLQGRLYALGGGESIWQGARVLKSTEIMEEPLAR---------------------------LTMPWRPGPCMVKARCGLAAAAS-ITGDIYAAGGYGGGTTYLSSVEVLRAGDSEGATREWLVDVVRPMHVARTGFGLAFGPDGCL 378          
BLAST of mRNA_P-wetherbeei_contig6944.1.1 vs. uniprot
Match: A0A8J6CH67_DIALT (F-box domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CH67_DIALT)

HSP 1 Score: 77.8 bits (190), Expect = 1.540e-11
Identity = 69/225 (30.67%), Postives = 91/225 (40.44%), Query Frame = 0
Query:  204 AAAVDRFGCGLIVGGWD------GARPLAAVERCRRRXXXXXPLAAMDAASAATGAPPALAALELVWEQL-PPLREARCFPAAAFDTAGRAYALGGGGGPLVGASVMASIEVLARDDAHGLGSCSSSGRRACSSGGACCGSLAGDDASLAWRPGPPMLEPRCGLAAAVCPASGLIYAVGGFGGGRNYLSSAEVL---NPATERWTPAPSMAHRRTGFGLAWGPDG 418
            AA  D  G    +GGW        + P A++  C+           ++A +A  G           W  L   + E R FP AA       +A+GGG  P  GA   AS E+   D A                                WRPGPPML  RCGLA       G++YA+GG+GGGR Y SS E+L   +     W  +P M+  R+G   + GPDG
Sbjct:  135 AATTDCAGTVYALGGWVLRDHALNSLPSASLRSCQT----------LEATAAPAG-----------WRSLGAQMAEKRAFPGAACVDGFNIFAVGGGTSPWWGARCHASTELYVPDAA-------------------------------VWRPGPPMLAARCGLAVVHDAPRGVLYALGGYGGGREYNSSVEMLPLGSAGGRGWLASPPMSAPRSGLSASLGPDG 307          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6944.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A4D9D447_9STRA1.250e-2037.19Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7T4D3_9STRA2.380e-1936.36Kelch-like protein diablo n=1 Tax=Nannochloropsis ... [more]
A0A8J6CH67_DIALT1.540e-1130.67F-box domain-containing protein n=1 Tax=Diacronema... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006652Kelch repeat type 1SMARTSM00612kelc_smartcoord: 370..417
e-value: 1.3E-11
score: 54.6
coord: 419..466
e-value: 0.019
score: 24.1
IPR006652Kelch repeat type 1PFAMPF01344Kelch_1coord: 364..403
e-value: 3.9E-10
score: 39.1
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 258..501
e-value: 2.5E-38
score: 133.8
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 343..498
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 147..297
IPR037293Galactose oxidase, central domain superfamilyGENE3D2.130.10.80coord: 94..257
e-value: 4.0E-6
score: 28.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..167
NoneNo IPR availablePANTHERPTHR24412KELCH PROTEINcoord: 417..503
coord: 200..431
NoneNo IPR availablePANTHERPTHR24412:SF460RING CANAL KELCH PROTEINcoord: 417..503
NoneNo IPR availablePANTHERPTHR24412:SF460RING CANAL KELCH PROTEINcoord: 200..431

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6944contigP-wetherbeei_contig6944:896..2587 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6944.1.1mRNA_P-wetherbeei_contig6944.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6944 883..2905 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6944.1.1 ID=prot_P-wetherbeei_contig6944.1.1|Name=mRNA_P-wetherbeei_contig6944.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=564bp
MASRPRTFPAAARRPLRRLDDLHAEVAERLFSFLNSEALASLETASAVWC
SRILEVRCWERFVAPRGGAFCLLQPQPDHASFGTPVCAQRYWKSFLAAMA
SGNSTAAAGKRTEVATTAAAIPRPASPSTAEATPDKPRPAMRNTSAGRIY
AFGGQDEPDEEDERATGAVRSLADVGGEGDSGIGSGGLSWRRETPLAVPR
TCAAAAVDRFGCGLIVGGWDGARPLAAVERCRRRRRRRHPLAAMDAASAA
TGAPPALAALELVWEQLPPLREARCFPAAAFDTAGRAYALGGGGGPLVGA
SVMASIEVLARDDAHGLGSCSSSGRRACSSGGACCGSLAGDDASLAWRPG
PPMLEPRCGLAAAVCPASGLIYAVGGFGGGRNYLSSAEVLNPATERWTPA
PSMAHRRTGFGLAWGPDGGLYAAGGSPNGSSALTALERLDPREGRWQGRA
PSLLARAYCAAAFATSGQLYLLGGGSLGTGLLKSIEVYCPRADRWRLLFN
GLPGVEAADEAQAADGGVAAATDILTTEEREAAPAAAGSPLGEANSQTGV
LGDMSVAFLWGCE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006652Kelch_1
IPR015915Kelch-typ_b-propeller
IPR037293Gal_Oxidase_central_sf