prot_P-wetherbeei_contig6907.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6907.3.1
Unique Nameprot_P-wetherbeei_contig6907.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length202
Homology
BLAST of mRNA_P-wetherbeei_contig6907.3.1 vs. uniprot
Match: A0A6I3GER1_9ACTN (TetR family transcriptional regulator n=3 Tax=root TaxID=1 RepID=A0A6I3GER1_9ACTN)

HSP 1 Score: 97.1 bits (240), Expect = 1.240e-21
Identity = 51/192 (26.56%), Postives = 107/192 (55.73%), Query Frame = 0
Query:    8 TRDRILAATVAVLERDGPDAVRVLSIAEDASVTTGAIYHHFDNRRSLLVAAQLQRFASAIPEDVRLIVGLLTSAQSADDLRAGFAAITAVAYLPERASNRAARSEVVSAARTNPELAAALSQQQHGYVVSVREAVASAQARGVMRADTDPHAMAVLMMALPFGFQLADIDREEAVDLTSWAVVVGRVVESFL 199
            T+  ++A TV++++  GP    V  + +++ ++ G++YHHF++   +++AAQ++RFA  + ED+  +  +L +A S +DL      ++ +A+  ERA  R  R E++++AR + ++  AL   Q     S  + +   Q+R  +  +  P A+AV + A   G  + D   E  +D+ +W  ++ R++ + +
Sbjct:    7 TKSHLIATTVSLIDEFGPQGFTVDQLLDNSKISKGSLYHHFEDFHDVIIAAQVERFAQYVEEDIAGVTQVLLAATSREDLLNRLDTVSLIAHSEERAKRRGDRMEILTSARHSEKMKLALGPVQARLTASFADLIREMQSRQWVTTEISPEAVAVFIQAYSLGLVVNDASSEH-IDMAAWHQLISRMLRTLI 197          
BLAST of mRNA_P-wetherbeei_contig6907.3.1 vs. uniprot
Match: A0A7K0ZCC0_9ACTN (TetR family transcriptional regulator n=2 Tax=root TaxID=1 RepID=A0A7K0ZCC0_9ACTN)

HSP 1 Score: 85.5 bits (210), Expect = 3.040e-17
Identity = 55/194 (28.35%), Postives = 99/194 (51.03%), Query Frame = 0
Query:    8 TRDRILAATVAVLERDGPDAVRVLSIAEDASVTTGAIYHHFDNRRSLLVAAQLQRFASAIPEDVRLIVGLLTSAQSADDLRAGFAAITAVAYLPERASNRAARSEVVSAARTNPELAAALSQQQHGYVVSVREAVASAQARGVMRADTDPHAMAVLMMALPFGFQLADIDREEAVDLTSWAVVVGRVVESFLAG 201
            T+  +L   +++++  GP    V ++ E + ++ G++YHHF +   ++  AQ+ RF+  + +D+ L+VGLL SA S +DL + FA I   A LP R + R+ R+ ++  AR +   A  L+ +Q      + +     Q RG +  D D   +A  + A   GF L D +    + +  W+  +     SF+ G
Sbjct:    4 TKGLLLETAISLIDEFGPQGFTVETLLETSKISKGSLYHHFHDFSDVIEQAQVARFSRYVDQDIMLLVGLLKSATSREDLESKFAMIVQGAGLPGRDAARSDRAAILGMARHSKNFAEGLAIEQQRVTDVLTDIAREMQERGWINKDLDAAVVATFVQAYSMGFVLND-NTTNPISIERWSAFI-----SFMLG 191          
BLAST of mRNA_P-wetherbeei_contig6907.3.1 vs. uniprot
Match: A0A6L6CFY0_9ACTN (TetR family transcriptional regulator n=4 Tax=root TaxID=1 RepID=A0A6L6CFY0_9ACTN)

HSP 1 Score: 84.3 bits (207), Expect = 1.530e-16
Identity = 54/196 (27.55%), Postives = 98/196 (50.00%), Query Frame = 0
Query:    4 TAEGTRDRILAATVAVLERDGPDAVRVLSIAEDASVTTGAIYHHFDNRRSLLVAAQLQRFASAIPEDVRLIVGLLTSAQSADDLRAGFAAITAVAYLPERASNRAARSEVVSAARTNPELAAALSQQQHGYVVSVREAVASAQARGVMRADTDPHAMAVLMMALPFGFQLADIDREEAVDLTSWAVVVGRVVESFL 199
            T   T+  +L   V++++  GP    V ++ E + ++ G++YHHF +   ++  AQ+ RF+  + ED+ L+V LL S+ S +DL+  FA I   A +P R   RA R+ ++  AR + + A  L+ +Q      + +     Q RG +  D D   +A  + A   GF L D +    + +  W+  +  ++   L
Sbjct:   30 TMHPTKALLLETAVSLIDEFGPQGFTVETLLETSKISKGSLYHHFHDFSDVIEQAQVARFSRYVDEDIALLVDLLRSSTSREDLQKKFALIVQGAGMPGREVARADRAAILGMARHSKKFAEGLALEQQRVTDVLADIAREMQERGWINKDIDGAVVATFVQAYSMGFVLND-NTTNPISIEQWSSFISMMLSKIL 224          
BLAST of mRNA_P-wetherbeei_contig6907.3.1 vs. uniprot
Match: A0A6I2X251_9ACTN (TetR family transcriptional regulator n=2 Tax=root TaxID=1 RepID=A0A6I2X251_9ACTN)

HSP 1 Score: 84.0 bits (206), Expect = 1.570e-16
Identity = 54/147 (36.73%), Postives = 78/147 (53.06%), Query Frame = 0
Query:   11 RILAATVAVLERDGPDAVRVLSIAEDASVTTGAIYHHFDNRRSLLVAAQLQRFASAIPEDVRLIVGLLTSAQSADDLRAGFAAITAVAYLPERASNRAARSEVVSAARTNPELAAALSQQQHGYVVSVREAVASAQARGVMRADTDP 157
            R+LAA   V+E  G  ++RV  I E A V    +Y HF NR  L+ +A L RF   + ++  +   L   A S ++ RA F  +   A  P R   R  R EV+ +A + PEL+  +S+ Q      V + +ASAQARG +RAD +P
Sbjct:   16 RLLAAASEVIETSGEASLRVQEIVEIAGVQAPVLYRHFGNREGLVQSAHLARFIRELADEGEMFSILAGQADSKEEFRAHFDTLVHAAAHPSRRERRRTRLEVLGSAMSRPELSELISRVQASTYSKVVDTIASAQARGWVRADVEP 162          
BLAST of mRNA_P-wetherbeei_contig6907.3.1 vs. uniprot
Match: A0A6L6D8T7_9ACTN (TetR family transcriptional regulator n=4 Tax=root TaxID=1 RepID=A0A6L6D8T7_9ACTN)

HSP 1 Score: 65.9 bits (159), Expect = 9.960e-10
Identity = 54/188 (28.72%), Postives = 89/188 (47.34%), Query Frame = 0
Query:    8 TRDRILAATVAVLERDGPDAVRVLSIAEDASVTTGAIYHHFDNRRSLLVAAQLQRFASAIPEDVRLIVGLLTSAQSADDLRAGFAAITAVAYLPERASNRAARSEVVSAARTNPELAAALSQQQHGYVVSVREAVASAQARGVMRADTDPHAMAVLMMALPFGFQLADIDREEAVDLTSWAVVVGRVV 195
            TR+R+L AT AV+++ G  AVR+  I +  ++T  +IYH F +R  L+ AAQ  RF+    E        L   +S  DL         + + P+R + R +R  V+  A   PEL+  L+  Q      V + +  AQA+G +R D +P   A  +  +    +L ++     +    W V+  R +
Sbjct:    7 TRERLLKATAAVIDKGGESAVRIRDITKACTITAPSIYHFFGSREGLIDAAQAYRFSRGQRELGLAFSTALYKCRSKKDLTELAHRFLDLMFAPDRRATRNSRLNVLGNAIYRPELSKELAVAQDLSNKIVGDPLRFAQAKGWVRDDFNPEMFAAWLNGVVNSRRLIEMGGNHPL-ADEWDVIAKRSI 193          
BLAST of mRNA_P-wetherbeei_contig6907.3.1 vs. uniprot
Match: A0A7K0VVK0_9ACTN (TetR family transcriptional regulator n=2 Tax=root TaxID=1 RepID=A0A7K0VVK0_9ACTN)

HSP 1 Score: 61.6 bits (148), Expect = 3.600e-8
Identity = 48/188 (25.53%), Postives = 89/188 (47.34%), Query Frame = 0
Query:    8 TRDRILAATVAVLERDGPDAVRVLSIAEDASVTTGAIYHHFDNRRSLLVAAQLQRFASAIPEDVRLIVGLLTSAQSADDLRAGFAAITAVAYLPERASNRAARSEVVSAARTNPELAAALSQQQHGYVVSVREAVASAQARGVMRADTDPHAMAVLMMALPFGFQLADIDREEAVDLTSWAVVVGRVV 195
            TR+R+L AT A +++ G  AVR+  + +  ++T  +IYH F +R  L+ AAQ  RF+    +        +   ++            A  + P+R + R  R  V+  A   P+L+  L++ Q    V V EA+  AQ++G +R D +    A  ++ +    +L +++    +    W V+  R +
Sbjct:    9 TRERLLKATAATIDKGGEGAVRIRDLTKSCNITAPSIYHFFGSREGLIDAAQAYRFSRGQLQLGDAFASAIHQCKNKTQFVELAHRFLATMFSPDRRAVRNTRLNVLGNAVNRPDLSKELARVQEESNVVVGEALRYAQSKGWVRDDFNCEMFAAWLVGMVNSRRLIEMNGNHPLG-DEWDVIAKRSI 195          
BLAST of mRNA_P-wetherbeei_contig6907.3.1 vs. uniprot
Match: A0A6I2VTS4_9ACTN (TetR family transcriptional regulator n=2 Tax=root TaxID=1 RepID=A0A6I2VTS4_9ACTN)

HSP 1 Score: 59.3 bits (142), Expect = 1.990e-7
Identity = 43/152 (28.29%), Postives = 72/152 (47.37%), Query Frame = 0
Query:   16 TVAVLERDGPDAVRVLSIAEDASVTTGAIYHHFDNRRSLLVAAQLQRFASAIPEDVRLIVGLLTSAQSADDLRAGFAAITAVAYLPERASNRAARSEVVSAARTNPELAAALSQQQHGYVVSVREAVASAQARGVMRADTDPHAMAVLMMAL 167
            T+AV+E DG + VRV+ IA+   V    ++H F NR SL+ AAQ++R+   +   +         A++ +D RA    +      P  ++ R +R  V  +A    EL  AL+   +   + ++ A   A+  G +    D  A A  M+ L
Sbjct:   14 TIAVIETDGEEGVRVVDIAKHVGVAVTTLFHLFGNRDSLIRAAQIERYVRGLANMIEEFDVATAIARTKEDFRAVVIRMVRSEIAPINSAIRQSRQGVFGSAYGRRELTTALTDSHNSMCLGLQVAFERAKENGWIEPSLDSLATAYWMLGL 165          
BLAST of mRNA_P-wetherbeei_contig6907.3.1 vs. uniprot
Match: A0A6L6CUM7_9ACTN (TetR family transcriptional regulator (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A6L6CUM7_9ACTN)

HSP 1 Score: 57.0 bits (136), Expect = 3.200e-7
Identity = 37/107 (34.58%), Postives = 55/107 (51.40%), Query Frame = 0
Query:    8 TRDRILAATVAVLERDGPDAVRVLSIAEDASVTTGAIYHHFDNRRSLLVAAQLQRFASAIPEDVRLIVGLLTSAQSADDLRAGFAAITAVAYLPERASNRAARSEVV 114
            TR+R+L AT AV+++ G  AVR+  I +  ++T  +IYH F +R  L+ AAQ  RF+    E        L   +S  DL         + + PER S R +R  V+
Sbjct:    7 TRERLLKATAAVIDKGGESAVRIRDITKACTITAPSIYHFFGSREGLIDAAQAYRFSRGQRELSLAFSTALYKCRSKKDLTELAHRFLDLMFAPERRSTRNSRLNVL 113          
BLAST of mRNA_P-wetherbeei_contig6907.3.1 vs. uniprot
Match: A0A7V9NTU9_9ACTN (TetR/AcrR family transcriptional regulator n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9NTU9_9ACTN)

HSP 1 Score: 58.2 bits (139), Expect = 5.010e-7
Identity = 57/205 (27.80%), Postives = 90/205 (43.90%), Query Frame = 0
Query:    3 VTAEGTRDRILAATVAVLERDGPDAVRVLSIAEDASVTTGAIYHHFDNRRSLLVAAQLQRFASAIPEDVRLIVGLLTSAQSADDLRAGFAAITAVAYLPERASNRAARS--------EVVSAARTNPELAAALSQQQHGYVVSVREAVASAQARGVMRADTDPHAMAVLMMALPFGFQLADIDREEAVDLTSWAVVVGRVVESFL 199
            VTA+ TR+R+LAA  +V  R G D   +  +A +A V++GAIY HF ++  L  AA LQ   S        +  LL    + +           V +L +R    A R         + + AAR +P++AA L          + + + S Q  G++ +     A A  ++ L  G  L       +VD   WA ++  VV  F+
Sbjct:    7 VTADQTRERMLAAAASVFARGGYDGASIAELASEAGVSSGAIYSHFGSKAELF-AATLQTHGSTE------VAALLAFGATPNP----------VEFLTQRGRGLAHRRPEEGSLLVQAIVAARRHPDVAALLISAFSEREGRIADMLRSGQVDGLVDSGVPAAAAARFVLMLALGSLLVAAMELPSVDPDDWAQMITDVVSRFI 194          
BLAST of mRNA_P-wetherbeei_contig6907.3.1 vs. uniprot
Match: A0A6J6VI75_9ZZZZ (Unannotated protein n=1 Tax=freshwater metagenome TaxID=449393 RepID=A0A6J6VI75_9ZZZZ)

HSP 1 Score: 57.4 bits (137), Expect = 1.150e-6
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 0
Query:    6 EGTRDRILAATVAVLERDGPDAVRVLSIAEDASVTTGAIYHHFDNRRSLLVAAQ-----------LQRFASAI--PEDVRLIVGLLTSA 81
            E + DR+LAAT+A+L+  GP AV V ++A  A  + G++YH F +R  LL+AAQ            Q FA A   P+D R +  L T+A
Sbjct:   10 ESSADRMLAATLALLDEGGPTAVTVAAVARAAGTSNGSLYHRFGDRHGLLLAAQSRVLGTIEAETAQAFAVADTEPDDERAVALLATAA 98          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6907.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6I3GER1_9ACTN1.240e-2126.56TetR family transcriptional regulator n=3 Tax=root... [more]
A0A7K0ZCC0_9ACTN3.040e-1728.35TetR family transcriptional regulator n=2 Tax=root... [more]
A0A6L6CFY0_9ACTN1.530e-1627.55TetR family transcriptional regulator n=4 Tax=root... [more]
A0A6I2X251_9ACTN1.570e-1636.73TetR family transcriptional regulator n=2 Tax=root... [more]
A0A6L6D8T7_9ACTN9.960e-1028.72TetR family transcriptional regulator n=4 Tax=root... [more]
A0A7K0VVK0_9ACTN3.600e-825.53TetR family transcriptional regulator n=2 Tax=root... [more]
A0A6I2VTS4_9ACTN1.990e-728.29TetR family transcriptional regulator n=2 Tax=root... [more]
A0A6L6CUM7_9ACTN3.200e-734.58TetR family transcriptional regulator (Fragment) n... [more]
A0A7V9NTU9_9ACTN5.010e-727.80TetR/AcrR family transcriptional regulator n=1 Tax... [more]
A0A6J6VI75_9ZZZZ1.150e-640.45Unannotated protein n=1 Tax=freshwater metagenome ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001647DNA-binding HTH domain, TetR-typePRINTSPR00455HTHTETRcoord: 12..25
score: 26.73
coord: 33..56
score: 33.27
IPR001647DNA-binding HTH domain, TetR-typePFAMPF00440TetR_Ncoord: 12..58
e-value: 5.3E-11
score: 42.1
IPR001647DNA-binding HTH domain, TetR-typePROSITEPS50977HTH_TETR_2coord: 6..66
score: 18.545053
NoneNo IPR availableGENE3D1.10.357.10Tetracycline Repressor, domain 2coord: 6..189
e-value: 8.2E-26
score: 93.6
NoneNo IPR availablePANTHERPTHR30055HTH-TYPE TRANSCRIPTIONAL REGULATOR RUTRcoord: 7..200
IPR036271Tetracyclin repressor-like, C-terminal domain superfamilySUPERFAMILY48498Tetracyclin repressor-like, C-terminal domaincoord: 97..183
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 5..64

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6907contigP-wetherbeei_contig6907:2293..2898 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6907.3.1mRNA_P-wetherbeei_contig6907.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6907 2293..2898 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6907.3.1 ID=prot_P-wetherbeei_contig6907.3.1|Name=mRNA_P-wetherbeei_contig6907.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=202bp
GAVTAEGTRDRILAATVAVLERDGPDAVRVLSIAEDASVTTGAIYHHFDN
RRSLLVAAQLQRFASAIPEDVRLIVGLLTSAQSADDLRAGFAAITAVAYL
PERASNRAARSEVVSAARTNPELAAALSQQQHGYVVSVREAVASAQARGV
MRADTDPHAMAVLMMALPFGFQLADIDREEAVDLTSWAVVVGRVVESFLA
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001647HTH_TetR
IPR036271Tet_transcr_reg_TetR-rel_C_sf
IPR009057Homeobox-like_sf