prot_P-wetherbeei_contig6848.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6848.1.1
Unique Nameprot_P-wetherbeei_contig6848.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length170
Homology
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: D7G4S8_ECTSI (DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4S8_ECTSI)

HSP 1 Score: 192 bits (488), Expect = 1.430e-53
Identity = 94/130 (72.31%), Postives = 104/130 (80.00%), Query Frame = 0
Query:    1 VTWLTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGKFAGKLGLSFADAEVKDSKLWLVK--RPP 128
            V WLT++L   GIIAAPLSG SSK+DR EIMRRLQD R+  VVTTEMAARGLDVA LTHVVNYDLPTDADHYVHRAGRCGRAGRPGIV+N+  P+ KFV+GKFA  LGL F D EV+  + W V    PP
Sbjct: 1101 VNWLTERLETVGIIAAPLSGESSKDDRAEIMRRLQDKRIAMVVTTEMAARGLDVAHLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVVNMATPDVKFVMGKFAKSLGLPFDDCEVQGGRFWSVSTTEPP 1230          
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A835Z5P1_9STRA (Phosphodiesterase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P1_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.250e-45
Identity = 83/121 (68.60%), Postives = 96/121 (79.34%), Query Frame = 0
Query:    1 VTWLTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGKFAGKLGLSFADAEVKDSKL 121
            V WLT+KL   GIIAAPLSG S KE+RTEIM+RL DGRL  VVTTEMAARG+DV +LTHVVNYDLPTDA+HYVHRAG        GIV+N+  P+TKFV+ KF+ +LGL F D +VKDSKL
Sbjct:  801 VRWLTEKLETVGIIAAPLSGESVKEERTEIMKRLTDGRLAMVVTTEMAARGIDVPQLTHVVNYDLPTDAEHYVHRAGXXXXXXXXGIVVNMAQPDTKFVISKFSQRLGLEFVDVDVKDSKL 921          
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A7S2XV29_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV29_9STRA)

HSP 1 Score: 159 bits (403), Expect = 3.470e-43
Identity = 80/127 (62.99%), Postives = 101/127 (79.53%), Query Frame = 0
Query:    4 LTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGK-FAGKLGLSFADAEVKDSKLWLVKRPPD 129
            L +KL + GI+AAPLSG SSK+DR E +RRLQ G++  +V+TE+AARGLDV +LTHVVNYDLPTDA+HYVHRAGRCGRAG+PGIV++ T P+  FVL K FA KLG+ F + E K  KL ++K P +
Sbjct:  413 LLEKLLDLGIVAAPLSGESSKDDRKEAVRRLQKGQISVLVSTELAARGLDVPQLTHVVNYDLPTDAEHYVHRAGRCGRAGKPGIVVSFTTPKLNFVLTKKFAPKLGIEFQEIEAKYGKL-ILKSPDE 538          
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A0G4F225_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F225_VITBC)

HSP 1 Score: 144 bits (362), Expect = 1.080e-36
Identity = 65/126 (51.59%), Postives = 91/126 (72.22%), Query Frame = 0
Query:    1 VTWLTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGKFAGKLGLSFADAEVKDSKLWLVKR 126
            V WL D L +  IIAAPLSG +SK+DR E+ +R+Q+G++G  V+TE+ ARGLDV  L+HVVN DLPTDA+HY+HRAGR GRAG PG+V+N   P+T+FV+ K    L +   + ++ + K+ L  +
Sbjct:  654 VKWLVDHLLQKQIIAAPLSGFTSKDDRAEVFKRMQNGQIGMAVSTELGARGLDVPWLSHVVNLDLPTDAEHYIHRAGRVGRAGNPGVVMNFVTPDTRFVIRKLEKALNIDIREVDLYEGKVMLKSK 779          
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A7S2RGS7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGS7_9STRA)

HSP 1 Score: 139 bits (350), Expect = 4.810e-35
Identity = 74/121 (61.16%), Postives = 83/121 (68.60%), Query Frame = 0
Query:    4 LTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGKFAGKLGLSFADAEVKDSKLWLV 124
            L DKL + GIIAAPL G SSKEDRTEIMRRL  GRLG VVTTE+AARG+D   LTHVVN DLP DA  Y HRAGR GRAGRPGIV++   P  K    K    LG+   DA +   +L +V
Sbjct:  737 LCDKLLDVGIIAAPLHGESSKEDRTEIMRRLASGRLGLVVTTELAARGIDAPILTHVVNLDLPPDATRYAHRAGRVGRAGRPGIVLSFITPWQKKEATKLTSALGVDLHDAVLHGGRLLMV 857          
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: L1JBQ8_GUITC (Uncharacterized protein (Fragment) n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JBQ8_GUITC)

HSP 1 Score: 129 bits (323), Expect = 1.320e-32
Identity = 67/121 (55.37%), Postives = 85/121 (70.25%), Query Frame = 0
Query:    4 LTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAV---VTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGKFAGKLGLSFADAEVKDSKL 121
            + DKL E G+IAAPL G  SKEDR E+MRRL++G LG V   V TE+AARG+D+  L+HVV+ DLPTDA+HYVHRAGR  R G  G  I +  P+ KFV+ KF  +LGL F   +V + +L
Sbjct:  264 ICDKLFENGLIAAPLKGDESKEDRKEVMRRLREGTLGEVPLVVATEIAARGIDIPGLSHVVSLDLPTDANHYVHRAGRTARGGAEGTSIVLCEPQEKFVVEKFCKELGLDFQYGQVYEQEL 384          
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A7S4R6D9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R6D9_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.460e-32
Identity = 66/126 (52.38%), Postives = 85/126 (67.46%), Query Frame = 0
Query:    4 LTDKLGEAGIIAAPLSG--LSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPE--TKFVLGKFAGKLGLSFADAEVKDSKLWLVK 125
            + DKL + GI+AAPL G   S K DR E+ R L+DG +G VV+TEMAARG+D   LTHV+N DLPTDA HY HR+GRCGR GRPG+V+N T      K V  +FA +LG+     E +  KL +++
Sbjct:  440 VVDKLADMGIVAAPLFGGTKSDKNDRAEVARALRDGYVGIVVSTEMAARGIDAPLLTHVINLDLPTDASHYAHRSGRCGRGGRPGVVVNFTSGNGGEKSVPKRFAEELGIDMYSVEARGGKLRILE 565          
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A7S2EH88_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EH88_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.210e-32
Identity = 66/126 (52.38%), Postives = 85/126 (67.46%), Query Frame = 0
Query:    4 LTDKLGEAGIIAAPLSG--LSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPE--TKFVLGKFAGKLGLSFADAEVKDSKLWLVK 125
            + DKL + GI+AAPL G   S K DR E+ R L+DG +G VV+TEMAARG+D   LTHV+N DLPTDA HY HR+GRCGR GRPG+V+N T      K V  +FA +LG+     E +  KL +++
Sbjct:  719 VVDKLADMGIVAAPLFGGTKSDKNDRAEVARALRDGYVGIVVSTEMAARGIDAPLLTHVINLDLPTDASHYAHRSGRCGRGGRPGVVVNFTSGNGGEKSVPKRFAEELGIDMYSVEARGGKLRILE 844          
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A7S2S9L8_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S9L8_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.570e-31
Identity = 56/86 (65.12%), Postives = 67/86 (77.91%), Query Frame = 0
Query:    7 KLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVT 92
            KL E GIIAAP +G   K+DRT++ + L++G +G VV TEMAARG+D   LTHV+NYDLPTDA HY HRAGR  R GRPGIVIN+T
Sbjct:   72 KLAEMGIIAAPFTGEEQKQDRTDVNKALREGYVGIVVATEMAARGIDAPYLTHVINYDLPTDASHYAHRAGRVARGGRPGIVINMT 157          
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Match: A0A0G4FYR2_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FYR2_9ALVE)

HSP 1 Score: 125 bits (315), Expect = 2.550e-30
Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 0
Query:   16 APLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAARGLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVLGKFAGKLGLSFADAEVKDSKLWLVK 125
            APLSG +SK +R E+ R LQDG +   + TE+ ARG+D+  LTH VN DLP D +HYVHRAGR GRAG PG+V+N   P+ +FV+ K+   LGL     E+ + +LW++K
Sbjct:  781 APLSGWTSKAERAEVFRELQDGGVDLTIATEVCARGVDLPFLTHAVNLDLPNDIEHYVHRAGRVGRAGNPGLVVNFVTPDNRFVIKKYEKALGLKIPRVELFEGRLWVMK 890          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6848.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4S8_ECTSI1.430e-5372.31DEAD box helicase n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
A0A835Z5P1_9STRA1.250e-4568.60Phosphodiesterase n=1 Tax=Tribonema minus TaxID=30... [more]
A0A7S2XV29_9STRA3.470e-4362.99Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A0G4F225_VITBC1.080e-3651.59Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A7S2RGS7_9STRA4.810e-3561.16Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
L1JBQ8_GUITC1.320e-3255.37Uncharacterized protein (Fragment) n=1 Tax=Guillar... [more]
A0A7S4R6D9_9STRA1.460e-3252.38Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2EH88_9STRA3.210e-3252.38Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2S9L8_9STRA2.570e-3165.12Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A0G4FYR2_9ALVE2.550e-3050.91Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 2..83
e-value: 2.8E-23
score: 93.4
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 10..83
e-value: 4.5E-18
score: 65.6
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..124
score: 14.950554
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..124
e-value: 1.7E-29
score: 105.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..170
NoneNo IPR availablePANTHERPTHR47963DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIALcoord: 4..119
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 1..90
e-value: 4.3997E-36
score: 119.92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6848contigP-wetherbeei_contig6848:84..593 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6848.1.1mRNA_P-wetherbeei_contig6848.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6848 84..594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6848.1.1 ID=prot_P-wetherbeei_contig6848.1.1|Name=mRNA_P-wetherbeei_contig6848.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp
VTWLTDKLGEAGIIAAPLSGLSSKEDRTEIMRRLQDGRLGAVVTTEMAAR
GLDVARLTHVVNYDLPTDADHYVHRAGRCGRAGRPGIVINVTPPETKFVL
GKFAGKLGLSFADAEVKDSKLWLVKRPPDASGSGGGSDHRNGGGGGSDMA
GRPPWRGGPSRGGDSRRRSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR027417P-loop_NTPase