prot_P-wetherbeei_contig682.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig682.1.1
Unique Name	prot_P-wetherbeei_contig682.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	138

Homology

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BLAST of mRNA_P-wetherbeei_contig682.1.1 vs. uniprot
Match: A0A1Q3JRM6_9PROT (Transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium 64-6 TaxID=1895710 RepID=A0A1Q3JRM6_9PROT)

HSP 1 Score: 212 bits (540), Expect = 9.770e-69
Identity = 109/132 (82.58%), Postives = 118/132 (89.39%), Query Frame = 0

Query:    1 MITIGALSQCTGVNIETIRYYERISLIPSPPRTDSGRRLYDSDDVRRLAFIRHSRDLGFEIPVIKQMLALQGKPEASCEQVSQIAYNQLAAVETRIRRLLGLRSELTRMIHECNNGNVATCRIIEVLADSAD 132
            MITIGALS+ TGVNIETIRYYERI LIP PPRTDSGRRLY ++DVRRL FIRH+RDLGF+I  IK MLALQG PEA CEQVS+IA NQL AVE+RIRRLLGLR+ELTRMI EC+NG VATCRIIEVLADSAD
Sbjct:    1 MITIGALSKRTGVNIETIRYYERIRLIPPPPRTDSGRRLYGAEDVRRLTFIRHARDLGFDIAAIKTMLALQGVPEAPCEQVSRIATNQLEAVESRIRRLLGLRTELTRMIKECDNGKVATCRIIEVLADSAD 132

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BLAST of mRNA_P-wetherbeei_contig682.1.1 vs. uniprot
Match: A0A521RKH1_9HYPH (MerR family transcriptional regulator n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A521RKH1_9HYPH)

HSP 1 Score: 205 bits (522), Expect = 5.400e-66
Identity = 106/133 (79.70%), Postives = 117/133 (87.97%), Query Frame = 0

Query:    1 MITIGALSQCTGVNIETIRYYERISLIPSPPRTDSGRRLYDSDDVRRLAFIRHSRDLGFEIPVIKQMLALQGKPEASCEQVSQIAYNQLAAVETRIRRLLGLRSELTRMIHECNNGNVATCRIIEVLADSADQ 133
            MITIGALS+ TGVNIETIRYYERI LIP PPRTDSGRRLY ++DVRRL FIRH+RDLGF+I  IK MLALQ  PEASCEQVS+IA +QL AVE+RIRRLLGLR+ELTRMI+EC+NG VATCRIIEVLAD   Q
Sbjct:    1 MITIGALSKHTGVNIETIRYYERIRLIPPPPRTDSGRRLYGAEDVRRLTFIRHARDLGFDIAAIKTMLALQEVPEASCEQVSRIASDQLEAVESRIRRLLGLRTELTRMINECDNGKVATCRIIEVLADPPGQ 133

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BLAST of mRNA_P-wetherbeei_contig682.1.1 vs. uniprot
Match: A0A0D7EIX3_RHOPL (Transcriptional regulator n=7 Tax=Proteobacteria TaxID=1224 RepID=A0A0D7EIX3_RHOPL)

HSP 1 Score: 205 bits (522), Expect = 5.400e-66
Identity = 104/130 (80.00%), Postives = 117/130 (90.00%), Query Frame = 0

Query:    1 MITIGALSQCTGVNIETIRYYERISLIPSPPRTDSGRRLYDSDDVRRLAFIRHSRDLGFEIPVIKQMLALQGKPEASCEQVSQIAYNQLAAVETRIRRLLGLRSELTRMIHECNNGNVATCRIIEVLADS 130
            MITIGALSQ TGVNIETIRYYERI+LIP PPRT+S RRLY+++DVRRL FIRHSRDLGF+IP IK MLALQ +PE+SCEQVS+IA +QL AVE RIRRLLGL+SELTRMI  C+NG VA+CRIIEVLADS
Sbjct:    1 MITIGALSQRTGVNIETIRYYERINLIPPPPRTESRRRLYEAEDVRRLTFIRHSRDLGFDIPAIKTMLALQERPESSCEQVSRIATDQLEAVEVRIRRLLGLKSELTRMIKSCDNGKVASCRIIEVLADS 130

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BLAST of mRNA_P-wetherbeei_contig682.1.1 vs. uniprot
Match: Q11N15_CHESB (Transcriptional regulator, MerR family n=1 Tax=Chelativorans sp. (strain BNC1) TaxID=266779 RepID=Q11N15_CHESB)

HSP 1 Score: 204 bits (519), Expect = 1.550e-65
Identity = 105/133 (78.95%), Postives = 116/133 (87.22%), Query Frame = 0

Query:    1 MITIGALSQCTGVNIETIRYYERISLIPSPPRTDSGRRLYDSDDVRRLAFIRHSRDLGFEIPVIKQMLALQGKPEASCEQVSQIAYNQLAAVETRIRRLLGLRSELTRMIHECNNGNVATCRIIEVLADSADQ 133
            M TIGALS+ TGVNIETIRYYERI LIP PPRT+SGRRLY +DDVRRL FIRH+RDLGF+I  IK ML+LQ  PEASCEQVS+IA +QL  VE+RIRRLLGLR+ELTRMI EC+NGNVA CRIIEVLADSA Q
Sbjct:    1 MFTIGALSKRTGVNIETIRYYERIMLIPPPPRTESGRRLYAADDVRRLTFIRHARDLGFDIAAIKTMLSLQEVPEASCEQVSRIAADQLETVESRIRRLLGLRTELTRMIDECDNGNVANCRIIEVLADSAGQ 133

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BLAST of mRNA_P-wetherbeei_contig682.1.1 vs. uniprot
Match: A0A3G2ULT2_SPHYA (MerR family transcriptional regulator n=6 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A3G2ULT2_SPHYA)

HSP 1 Score: 201 bits (510), Expect = 3.640e-64
Identity = 102/133 (76.69%), Postives = 116/133 (87.22%), Query Frame = 0

Query:    1 MITIGALSQCTGVNIETIRYYERISLIPSPPRTDSGRRLYDSDDVRRLAFIRHSRDLGFEIPVIKQMLALQGKPEASCEQVSQIAYNQLAAVETRIRRLLGLRSELTRMIHECNNGNVATCRIIEVLADSADQ 133
            MITIGALS+ TGVNIETIRYYERI LIP PPRTDSGRRLY ++DVRRL FIR++RDLGF+I  IK MLALQ +PEASC++VSQIA +QL AVE+RIRRLLGLR+EL RM+ EC+NG VATCRIIEVL DS  Q
Sbjct:    1 MITIGALSKRTGVNIETIRYYERIKLIPPPPRTDSGRRLYGAEDVRRLTFIRNARDLGFDISAIKTMLALQEEPEASCQEVSQIATDQLEAVESRIRRLLGLRTELIRMVQECDNGKVATCRIIEVLGDSPGQ 133

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BLAST of mRNA_P-wetherbeei_contig682.1.1 vs. uniprot
Match: A0A101KSQ5_RHILI (Transcriptional regulator n=1 Tax=Rhizobium loti TaxID=381 RepID=A0A101KSQ5_RHILI)

HSP 1 Score: 200 bits (509), Expect = 5.170e-64
Identity = 102/134 (76.12%), Postives = 117/134 (87.31%), Query Frame = 0

Query:    1 MITIGALSQCTGVNIETIRYYERISLIPSPPRTDSGRRLYDSDDVRRLAFIRHSRDLGFEIPVIKQMLALQGKPEASCEQVSQIAYNQLAAVETRIRRLLGLRSELTRMIHECNNGNVATCRIIEVLADSADQQ 134
            MITIGALS+ TGVNIETIRYYERI L+P PPRT SGRRLY ++DVRRL FIRH+RDLGF+I  IK MLALQ  PEASC++VS+IA +QL AVE+RIRRLLGLR+ELTRMI EC+NG VATCRIIEVLA++ D Q
Sbjct:    1 MITIGALSKRTGVNIETIRYYERIRLLPPPPRTGSGRRLYGAEDVRRLTFIRHARDLGFDISAIKTMLALQEVPEASCDEVSRIATDQLQAVESRIRRLLGLRTELTRMIKECDNGKVATCRIIEVLAEAPDAQ 134

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BLAST of mRNA_P-wetherbeei_contig682.1.1 vs. uniprot
Match: A0A327KEY3_9HYPH (HTH-type transcriptional regulator ZntR n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A327KEY3_9HYPH)

HSP 1 Score: 197 bits (502), Expect = 6.020e-63
Identity = 101/132 (76.52%), Postives = 113/132 (85.61%), Query Frame = 0

Query:    1 MITIGALSQCTGVNIETIRYYERISLIPSPPRTDSGRRLYDSDDVRRLAFIRHSRDLGFEIPVIKQMLALQGKPEASCEQVSQIAYNQLAAVETRIRRLLGLRSELTRMIHECNNGNVATCRIIEVLADSAD 132
            MITIG LS+ TGVNIETIRYYERI LIP  PRTDSGRRLY ++DVRRL FIRH+RDLGF+I  IK MLALQ  P+ASC+QV+QIA +QL AVE+RIRRLLGLR+ELTRMI EC+NG VA CRIIEVLAD  D
Sbjct:    1 MITIGTLSKRTGVNIETIRYYERIKLIPPAPRTDSGRRLYGAEDVRRLTFIRHARDLGFDIAAIKTMLALQDVPDASCQQVTQIATDQLEAVESRIRRLLGLRTELTRMIKECDNGKVANCRIIEVLADPPD 132

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BLAST of mRNA_P-wetherbeei_contig682.1.1 vs. uniprot
Match: UPI0015744DE8 (helix-turn-helix domain-containing protein n=1 Tax=Rhizobium radiobacter TaxID=358 RepID=UPI0015744DE8)

HSP 1 Score: 197 bits (502), Expect = 7.080e-63
Identity = 101/130 (77.69%), Postives = 114/130 (87.69%), Query Frame = 0

Query:    1 MITIGALSQCTGVNIETIRYYERISLIPSPPRTDSGRRLYDSDDVRRLAFIRHSRDLGFEIPVIKQMLALQGKPEASCEQVSQIAYNQLAAVETRIRRLLGLRSELTRMIHECNNGNVATCRIIEVLADS 130
            M TIGALSQ T VNIETIRYYERI+LIPSPPRT+SGRRLYD DDVRRLAFIRH+R+LGF+I  IK MLALQG PEASCE++S+IA +QLAAVE+RI RLL LR+EL RMI EC+NG V  CRIIEVLAD+
Sbjct:    1 MFTIGALSQRTSVNIETIRYYERINLIPSPPRTESGRRLYDMDDVRRLAFIRHARELGFDIAAIKTMLALQGVPEASCERLSRIASDQLAAVESRIDRLLELRTELMRMIDECDNGKVGNCRIIEVLADA 130

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BLAST of mRNA_P-wetherbeei_contig682.1.1 vs. uniprot
Match: UPI00069C58EC (helix-turn-helix domain-containing protein n=1 Tax=Agrobacterium tumefaciens complex TaxID=1183400 RepID=UPI00069C58EC)

HSP 1 Score: 197 bits (501), Expect = 1.010e-62
Identity = 100/131 (76.34%), Postives = 115/131 (87.79%), Query Frame = 0

Query:    1 MITIGALSQCTGVNIETIRYYERISLIPSPPRTDSGRRLYDSDDVRRLAFIRHSRDLGFEIPVIKQMLALQGKPEASCEQVSQIAYNQLAAVETRIRRLLGLRSELTRMIHECNNGNVATCRIIEVLADSA 131
            M TIGA+S+ T VNIETIRYYERI+LIPSPPRT+SGRRLYD+DDVRRL FIRH+R+LGF+I  IK MLALQG PEA CE+VSQIA +QLAAVE+RI RLL LR+EL RMI EC+NG V +CRIIEVLAD+A
Sbjct:    1 MFTIGAISRRTSVNIETIRYYERINLIPSPPRTESGRRLYDTDDVRRLTFIRHARELGFDIAAIKTMLALQGVPEAPCERVSQIASDQLAAVESRIDRLLELRAELMRMISECDNGKVGSCRIIEVLADAA 131

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BLAST of mRNA_P-wetherbeei_contig682.1.1 vs. uniprot
Match: UPI0010F6CDB9 (helix-turn-helix domain-containing protein n=1 Tax=Mesorhizobium comanense TaxID=2502215 RepID=UPI0010F6CDB9)

HSP 1 Score: 197 bits (500), Expect = 1.210e-62
Identity = 102/136 (75.00%), Postives = 116/136 (85.29%), Query Frame = 0

Query:    1 MITIGALSQCTGVNIETIRYYERISLIPSPPRTDSGRRLYDSDDVRRLAFIRHSRDLGFEIPVIKQMLALQGKPEASCEQVSQIAYNQLAAVETRIRRLLGLRSELTRMIHECNNGNVATCRIIEVLADSADQQGD 136
            MI IGALS+ TGVNIETIRYYERI LIP P RTDSGRRLY ++DVRRL FIRH+RDLGF+   IK MLALQ  PEASCE+VS+IA +QLAAVE+RIRRL GLR+ELTRMI+EC+NG VATCRIIEVLA++  Q  D
Sbjct:    1 MIAIGALSRRTGVNIETIRYYERIRLIPPPGRTDSGRRLYGAEDVRRLTFIRHARDLGFDTAAIKAMLALQEVPEASCEEVSRIAADQLAAVESRIRRLAGLRTELTRMINECDNGEVATCRIIEVLAEAPGQTVD 136

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig682.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig682.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A1Q3JRM6_9PROT	9.770e-69	82.58	Transcriptional regulator n=1 Tax=Alphaproteobacte...	[more]
A0A521RKH1_9HYPH	5.400e-66	79.70	MerR family transcriptional regulator n=3 Tax=Hyph...	[more]
A0A0D7EIX3_RHOPL	5.400e-66	80.00	Transcriptional regulator n=7 Tax=Proteobacteria T...	[more]
Q11N15_CHESB	1.550e-65	78.95	Transcriptional regulator, MerR family n=1 Tax=Che...	[more]
A0A3G2ULT2_SPHYA	3.640e-64	76.69	MerR family transcriptional regulator n=6 Tax=Sphi...	[more]
A0A101KSQ5_RHILI	5.170e-64	76.12	Transcriptional regulator n=1 Tax=Rhizobium loti T...	[more]
A0A327KEY3_9HYPH	6.020e-63	76.52	HTH-type transcriptional regulator ZntR n=2 Tax=Hy...	[more]
UPI0015744DE8	7.080e-63	77.69	helix-turn-helix domain-containing protein n=1 Tax...	[more]
UPI00069C58EC	1.010e-62	76.34	helix-turn-helix domain-containing protein n=1 Tax...	[more]
UPI0010F6CDB9	1.210e-62	75.00	helix-turn-helix domain-containing protein n=1 Tax...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000551	MerR-type HTH domain	PRINTS	PR00040	HTHMERR	coord: 14..27 score: 44.46 coord: 3..14 score: 43.75 coord: 38..58 score: 36.31
IPR000551	MerR-type HTH domain	SMART	SM00422	merrmega3	coord: 2..71 e-value: 4.6E-27 score: 105.9
IPR000551	MerR-type HTH domain	PFAM	PF13411	MerR_1	coord: 3..69 e-value: 3.6E-18 score: 65.4
IPR000551	MerR-type HTH domain	PROSITE	PS50937	HTH_MERR_2	coord: 1..70 score: 36.375134
None	No IPR available	GENE3D	1.10.1660.10		coord: 1..126 e-value: 9.8E-34 score: 118.1
None	No IPR available	PANTHER	PTHR30204	REDOX-CYCLING DRUG-SENSING TRANSCRIPTIONAL ACTIVATOR SOXR	coord: 3..131
None	No IPR available	PANTHER	PTHR30204:SF73	HEAVY METAL-DEPENDENT TRANSCRIPTIONAL REGULATOR HI_0293-RELATED	coord: 3..131
None	No IPR available	CDD	cd04785	HTH_CadR-PbrR-like	coord: 2..127 e-value: 1.13436E-58 score: 175.814
IPR009061	Putative DNA-binding domain superfamily	SUPERFAMILY	46955	Putative DNA-binding domain	coord: 3..126

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig682	contig	P-wetherbeei_contig682:409..822 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig682.1.1	mRNA_P-wetherbeei_contig682.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig682 409..822 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig682.1.1 ID=prot_P-wetherbeei_contig682.1.1|Name=mRNA_P-wetherbeei_contig682.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp
MITIGALSQCTGVNIETIRYYERISLIPSPPRTDSGRRLYDSDDVRRLAF
IRHSRDLGFEIPVIKQMLALQGKPEASCEQVSQIAYNQLAAVETRIRRLL
GLRSELTRMIHECNNGNVATCRIIEVLADSADQQGDS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000551	MerR-type_HTH_dom
IPR009061	DNA-bd_dom_put_sf