prot_P-wetherbeei_contig680.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig680.3.1
Unique Nameprot_P-wetherbeei_contig680.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length108
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig680.3.1 vs. uniprot
Match: A0A836CGE0_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGE0_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 5.610e-18
Identity = 42/99 (42.42%), Postives = 66/99 (66.67%), Query Frame = 0 
Query:    7 QSVFDDTLFDHMCSLLYNYKALSLLRPEVGEHSVMPLLSQVMSACSKSSILWVLDLERNREIVALSPNVLPAFDFHPEKVPKVSLSDVPQMQGMFHRED 105
            ++ FD++LFD MCSL+YNYKALS++ P   E SV+PL+ QVMSACS+ + +W++DL ++  I A++  +  A +  PE +    L  +  +  MFH +D
Sbjct:  389 RNFFDESLFDQMCSLIYNYKALSVMNPSFMEDSVVPLVLQVMSACSEDTAMWLIDLGQDMTIRAVTDGIA-ALELRPEDLEGHKLRALRDVNAMFHPDD 486
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig680.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CGE0_9STRA5.610e-1842.42RING-type domain-containing protein n=1 Tax=Tribon... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig680contigP-wetherbeei_contig680:4757..5576 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig680.3.1mRNA_P-wetherbeei_contig680.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig680 4757..5576 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig680.3.1 ID=prot_P-wetherbeei_contig680.3.1|Name=mRNA_P-wetherbeei_contig680.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp
LNDWQTQSVFDDTLFDHMCSLLYNYKALSLLRPEVGEHSVMPLLSQVMSA
CSKSSILWVLDLERNREIVALSPNVLPAFDFHPEKVPKVSLSDVPQMQGM
FHREDINE
back to top