prot_P-wetherbeei_contig677.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig677.2.1
Unique Nameprot_P-wetherbeei_contig677.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length125
Homology
BLAST of mRNA_P-wetherbeei_contig677.2.1 vs. uniprot
Match: D7FZ76_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ76_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 2.680e-46
Identity = 85/127 (66.93%), Postives = 101/127 (79.53%), Query Frame = 0
Query:    1 MVRVDVCYFCSGPIYPGHGMHFVRNDSKDTTFDFEKLRNRPIKYDRELMGKTLRAVKKAK-VQKKREQRFFEMRHKDRAAKEKAEIREQISQNIELIAPAAA-DREKTLVNVRERAKVAVAARAARA 125
            MVR+++CYFCS  IYPGHG+ F RNDSKDTTFDFEK RNRP+KYDRE MGKTL A+KK K VQ KRE+RFFE RHK   AKEKA I+ +I  NIEL+APAAA DREKTL  + ++AK   +A A++A
Sbjct:    1 MVRIEICYFCSSRIYPGHGIVFARNDSKDTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKAAIKAEIKDNIELLAPAAAVDREKTLTAISDKAKQKASAAASKA 127          
BLAST of mRNA_P-wetherbeei_contig677.2.1 vs. uniprot
Match: A0A835Z8F8_9STRA (RL30, ribosomal protein 30 60S large ribosomal subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8F8_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.630e-44
Identity = 84/151 (55.63%), Postives = 101/151 (66.89%), Query Frame = 0
Query:    1 MVRVDVCYFCSGPIYPGHGMHFVRNDSK--------------------------------------DTTFDFEKLRNRPIKYDRELMGKTLRAVKKA-KVQKKREQRFFEMRHKDRAAKEKAEIREQISQNIELIAPAAADREKTLVNVRE 112
            MVRV+VCYFCSGP+YPGHG+ FVRND+K                                      DTTFDFEK RNRP+KYDRELMGKTL A+KK  +VQ +RE+RFF++RHKD+AA+EKA IR ++ QNIEL+ PAAADREK L NV+E
Sbjct:    1 MVRVEVCYFCSGPMYPGHGVQFVRNDAKVFKFCRSKCHKNFIKKRNPRKMKWTKAYRKAAGKEMTVDTTFDFEKRRNRPVKYDRELMGKTLLAMKKVTEVQAQREKRFFDVRHKDKAAREKAAIRTEVEQNIELLVPAAADREKALANVKE 151          
BLAST of mRNA_P-wetherbeei_contig677.2.1 vs. uniprot
Match: A0A6H5KA78_9PHAE (TRASH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA78_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.350e-38
Identity = 85/165 (51.52%), Postives = 101/165 (61.21%), Query Frame = 0
Query:    1 MVRVDVCYFCSGPIYPGHGMHFVRNDSK--------------------------------------DTTFDFEKLRNRPIKYDRELMGKTLRAVKKAK-VQKKREQRFFEMRHKDRAAKEKAEIREQISQNIELIAPAAA-DREKTLVNVRERAKVAVAARAARA 125
            MVR+++CYFCS  IYPGHG+ F RNDSK                                      DTTFDFEK RNRP+KYDRE MGKTL A+KK K VQ KRE+RFFE RHK   AKEKA I+ +I  NIEL+APAAA DREKTL  + ++AK   +A A++A
Sbjct:    1 MVRIEICYFCSSRIYPGHGIVFARNDSKVFRFCRSKCHKNFTRKRNPRKSKWTKAFRRAAGKEMSVDTTFDFEKRRNRPVKYDREAMGKTLLAMKKVKEVQAKREKRFFENRHKGALAKEKAAIKAEIKDNIELLAPAAAVDREKTLTAISDKAKQKASAAASKA 165          
BLAST of mRNA_P-wetherbeei_contig677.2.1 vs. uniprot
Match: A0A7S3DS96_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DS96_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.220e-32
Identity = 72/159 (45.28%), Postives = 94/159 (59.12%), Query Frame = 0
Query:    2 VRVDVCYFCSGPIYPGHGMHFVRNDSK--------------------------------------DTTFDFEKLRNRPIKYDRELMGKTLRAVKKAK-VQKKREQRFFEMRHKDRAAKEKAEIREQISQNIELIAPAAADREKTLVNVRERAKVAVAAR 121
            +R++ CYFCS P YPGHGM FVRNDSK                                      D TF+FEK RNRP+KY+RELMGKTL+A+KK K +Q  RE RFF+ R KD A ++K + R +I ++IEL+APA A RE+ + NV + A+  +AAR
Sbjct:    1 MRIEKCYFCSSPCYPGHGMVFVRNDSKQFRFCRSKCIRNFHKKRNPRKVAWTKTYRKTAGKEMAVDATFEFEKRRNRPVKYNRELMGKTLQAMKKVKDIQNAREDRFFQARMKDAAVEKKQQARVEIEKSIELLAPAVASREQVMRNVVDSARARIAAR 159          
BLAST of mRNA_P-wetherbeei_contig677.2.1 vs. uniprot
Match: A0A1E7FH63_9STRA (60S ribosomal protein L24 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FH63_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.550e-32
Identity = 71/159 (44.65%), Postives = 97/159 (61.01%), Query Frame = 0
Query:    2 VRVDVCYFCSGPIYPGHGMHFVRNDSK--------------------------------------DTTFDFEKLRNRPIKYDRELMGKTLRAVKKAK-VQKKREQRFFEMRHKDRAAKEKAEIREQISQNIELIAPAAADREKTLVNVRERAKVAVAAR 121
            +R++ CYFCS P YPGHGM FVRNDSK                                      D+TFDFEK RNRP+KYDR+LMGKT+ A+K+ + ++K RE+RFFE R  D  A++K + R +I ++IEL+APA A+RE+ + NV + AK+ +AAR
Sbjct:    1 MRIEKCYFCSSPCYPGHGMTFVRNDSKQFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKEMAVDSTFDFEKRRNRPVKYDRDLMGKTILAMKRVETIKKAREERFFENRMSDAKAEKKKQARVEIEKSIELLAPAVANREQVMRNVIDSAKLRIAAR 159          
BLAST of mRNA_P-wetherbeei_contig677.2.1 vs. uniprot
Match: A0A4D9CSX3_9STRA (TRASH domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSX3_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.580e-31
Identity = 66/153 (43.14%), Postives = 94/153 (61.44%), Query Frame = 0
Query:    2 VRVDVCYFCSGPIYPGHGMHFVRNDSK--------------------------------------DTTFDFEKLRNRPIKYDRELMGKTLRAVKKAK-VQKKREQRFFEMRHKDRAAKEKAEIREQISQNIELIAPAAADREKTLVNVRERAK 115
            +R+  CYFCSGP+YPGHG  FVRND+K                                      D TFDFEK RNRP+KYDR+L+GKT++A++K + +Q +RE+ F++ R ++   KEKA ++ ++ +N+EL+APAAA REK L+NVRE+ K
Sbjct:    1 MRILKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKARWTKAYRKAAGKEMVVDATFDFEKRRNRPVKYDRDLVGKTVQAMQKIRTIQSRREEVFYQTRMREAKMKEKAALQVEVKENVELLAPAAASREKVLLNVREKVK 153          
BLAST of mRNA_P-wetherbeei_contig677.2.1 vs. uniprot
Match: A0A448YUA5_9STRA (TRASH domain-containing protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448YUA5_9STRA)

HSP 1 Score: 119 bits (297), Expect = 1.610e-31
Identity = 70/159 (44.03%), Postives = 97/159 (61.01%), Query Frame = 0
Query:    2 VRVDVCYFCSGPIYPGHGMHFVRNDSK--------------------------------------DTTFDFEKLRNRPIKYDRELMGKTLRAVKKAK-VQKKREQRFFEMRHKDRAAKEKAEIREQISQNIELIAPAAADREKTLVNVRERAKVAVAAR 121
            +R++ CYFCS P YPGHG+ FVRNDSK                                      D+TFDFEK RNRP+KYDR+LMGKT+ A+++ + ++K REQRFF+ R KD  A++K + R +I ++IEL+APA A+RE+ + NV + AK  +AAR
Sbjct:    1 MRIEKCYFCSSPCYPGHGITFVRNDSKQFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKEMAVDSTFDFEKRRNRPVKYDRDLMGKTILAMRRVESIKKAREQRFFDNRVKDSKAEKKQQARVEIEKSIELLAPAVANREQVMRNVIDSAKQRIAAR 159          
BLAST of mRNA_P-wetherbeei_contig677.2.1 vs. uniprot
Match: W7T7Z2_9STRA (Ribosome biogenesis protein rlp24 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T7Z2_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.060e-30
Identity = 66/153 (43.14%), Postives = 94/153 (61.44%), Query Frame = 0
Query:    2 VRVDVCYFCSGPIYPGHGMHFVRNDSK--------------------------------------DTTFDFEKLRNRPIKYDRELMGKTLRAVKKAK-VQKKREQRFFEMRHKDRAAKEKAEIREQISQNIELIAPAAADREKTLVNVRERAK 115
            +R+  CYFCSGP+YPGHG  FVRND+K                                      D TFDFEK RNRP+KYDR+L+GKT++A++K + +Q +RE+ F++ R ++   KEKA ++ ++ +N+EL+APAAA REK L+NVRE+ K
Sbjct:   77 MRILKCYFCSGPMYPGHGTTFVRNDAKVFNFCRSKCHRNFNKKRNPRKTRWTKAYRKAAGKEMVVDATFDFEKRRNRPVKYDRDLVGKTVQAMQKIRTIQSRREEVFYQTRMREAKMKEKAALQVEVKENVELLAPAAASREKALLNVREKVK 229          
BLAST of mRNA_P-wetherbeei_contig677.2.1 vs. uniprot
Match: A0A7S0PX55_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PX55_9STRA)

HSP 1 Score: 115 bits (288), Expect = 4.210e-30
Identity = 68/159 (42.77%), Postives = 95/159 (59.75%), Query Frame = 0
Query:    2 VRVDVCYFCSGPIYPGHGMHFVRNDSK--------------------------------------DTTFDFEKLRNRPIKYDRELMGKTLRAVKKAK-VQKKREQRFFEMRHKDRAAKEKAEIREQISQNIELIAPAAADREKTLVNVRERAKVAVAAR 121
            +RV+ CYFCS P YPGHGM FVRNDSK                                      D+TF+FEK RNRP+KYDR+LMGKT+ A+++ + +++ RE+RFF  R KD  A++K + R +I ++IEL+APA A RE+ + NV + A+  +AAR
Sbjct:    1 MRVEKCYFCSSPCYPGHGMMFVRNDSKTFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKEMAIDSTFEFEKRRNRPVKYDRDLMGKTILAMQRVQNIKENREERFFANRMKDAKAEKKQQARVEIEKSIELLAPAVASREQVMKNVVDSARARIAAR 159          
BLAST of mRNA_P-wetherbeei_contig677.2.1 vs. uniprot
Match: A0A6U3SB39_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SB39_9STRA)

HSP 1 Score: 115 bits (287), Expect = 6.290e-30
Identity = 67/159 (42.14%), Postives = 96/159 (60.38%), Query Frame = 0
Query:    2 VRVDVCYFCSGPIYPGHGMHFVRNDSK--------------------------------------DTTFDFEKLRNRPIKYDRELMGKTLRAVKKAK-VQKKREQRFFEMRHKDRAAKEKAEIREQISQNIELIAPAAADREKTLVNVRERAKVAVAAR 121
            +R++ CYFCS P YPGHGM FVRNDSK                                      D+TF+FEK RNRP+KYDR LMGKT+ A+++ + +++KRE+RFF  R KD   ++KA+ R +I + IEL+APA A+RE+ + NV ++A+  +A+R
Sbjct:    1 MRIEKCYFCSSPCYPGHGMVFVRNDSKQFRFCRSKCHRNFNKKRNPRKVAWTKAYRKTRGKELAIDSTFEFEKRRNRPVKYDRNLMGKTILAMQRVQAIKEKREERFFANRMKDAKKEQKAQARVEIEKGIELLAPAVANREEVMRNVVDKARERIASR 159          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig677.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZ76_ECTSI2.680e-4666.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8F8_9STRA3.630e-4455.63RL30, ribosomal protein 30 60S large ribosomal sub... [more]
A0A6H5KA78_9PHAE2.350e-3851.52TRASH domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S3DS96_9STRA2.220e-3245.28Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
A0A1E7FH63_9STRA2.550e-3244.6560S ribosomal protein L24 n=1 Tax=Fragilariopsis c... [more]
A0A4D9CSX3_9STRA1.580e-3143.14TRASH domain-containing protein n=2 Tax=Monodopsid... [more]
A0A448YUA5_9STRA1.610e-3144.03TRASH domain-containing protein n=2 Tax=Pseudo-nit... [more]
W7T7Z2_9STRA1.060e-3043.14Ribosome biogenesis protein rlp24 n=1 Tax=Nannochl... [more]
A0A7S0PX55_9STRA4.210e-3042.77Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
A0A6U3SB39_9STRA6.290e-3042.14Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000988Ribosomal protein L24e-relatedPFAMPF01246Ribosomal_L24ecoord: 3..38
e-value: 2.2E-11
score: 43.8
IPR000988Ribosomal protein L24e-relatedPANTHERPTHR1079260S RIBOSOMAL PROTEIN L24coord: 28..97
coord: 3..28
IPR038630Ribosomal protein L24e/L24 superfamilyGENE3D2.30.170.20Ribosomal protein L24ecoord: 1..46
e-value: 2.2E-10
score: 42.4
NoneNo IPR availablePANTHERPTHR10792:SF8RIBOSOME BIOGENESIS PROTEIN RLP24-RELATEDcoord: 28..97
coord: 3..28
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 6..39
IPR023442Ribosomal protein L24e, conserved sitePROSITEPS01073RIBOSOMAL_L24Ecoord: 9..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig677contigP-wetherbeei_contig677:756..1686 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig677.2.1mRNA_P-wetherbeei_contig677.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig677 756..1686 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig677.2.1 ID=prot_P-wetherbeei_contig677.2.1|Name=mRNA_P-wetherbeei_contig677.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=125bp
MVRVDVCYFCSGPIYPGHGMHFVRNDSKDTTFDFEKLRNRPIKYDRELMG
KTLRAVKKAKVQKKREQRFFEMRHKDRAAKEKAEIREQISQNIELIAPAA
ADREKTLVNVRERAKVAVAARAARA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000988Ribosomal_L24e-rel
IPR038630L24e/L24_sf
IPR023442Ribosomal_L24e_CS