prot_P-wetherbeei_contig6741.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6741.1.1
Unique Nameprot_P-wetherbeei_contig6741.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length119
Homology
BLAST of mRNA_P-wetherbeei_contig6741.1.1 vs. uniprot
Match: D7FM82_ECTSI (Succinate dehydrogenase assembly factor 4, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM82_ECTSI)

HSP 1 Score: 60.8 bits (146), Expect = 2.120e-9
Identity = 29/57 (50.88%), Postives = 36/57 (63.16%), Query Frame = 0
Query:   64 KTDACGPVDED--EDEMEQMFVQGPAGMEWGGPTRGGRXXXXXXXXXXXXKGRCSDF 118
            K D CG +++D  ++EME+M  +GPAG EWGGPTRGG             KGRCSDF
Sbjct:   75 KLDLCGEIEDDVGDEEMEEMLQEGPAGKEWGGPTRGGVLGEPTRFGDWERKGRCSDF 131          
BLAST of mRNA_P-wetherbeei_contig6741.1.1 vs. uniprot
Match: A0A7S3GRS8_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GRS8_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.770e-9
Identity = 28/53 (52.83%), Postives = 34/53 (64.15%), Query Frame = 0
Query:   68 CGPVDEDE--DEMEQMFVQGPAGMEWGGPTRGGRXXXXXXXXXXXXKGRCSDF 118
            CGP D+    DEME+MF++GPAG+EW GPTRGG+            KGR SDF
Sbjct:   60 CGPEDDPNELDEMEEMFIEGPAGLEWNGPTRGGKRPEPTRFGDWERKGRASDF 112          
BLAST of mRNA_P-wetherbeei_contig6741.1.1 vs. uniprot
Match: W4GYH8_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GYH8_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.030e-7
Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 0
Query:   72 DEDEDEMEQMFVQGPAGMEWGGPTRGGRXXXXXXXXXXXXKGRCSDF 118
            D+DE++ME M V GPAG+EWGGP RGG+            KGRC DF
Sbjct:   44 DDDEEDMEDMVVIGPAGVEWGGPQRGGKYKEPTRFGDWEKKGRCCDF 90          
BLAST of mRNA_P-wetherbeei_contig6741.1.1 vs. uniprot
Match: A0A6G0WXB9_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXB9_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 2.310e-7
Identity = 25/47 (53.19%), Postives = 29/47 (61.70%), Query Frame = 0
Query:   72 DEDEDEMEQMFVQGPAGMEWGGPTRGGRXXXXXXXXXXXXKGRCSDF 118
            D+DE++ME M V GPAG EWGGP RGG+            KGRC DF
Sbjct:   49 DDDEEDMEDMVVIGPAGTEWGGPQRGGKYKEPTRFGDWEKKGRCCDF 95          
BLAST of mRNA_P-wetherbeei_contig6741.1.1 vs. uniprot
Match: A0A482RUU1_9ARCH (DUF1674 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUU1_9ARCH)

HSP 1 Score: 53.9 bits (128), Expect = 5.380e-7
Identity = 24/42 (57.14%), Postives = 27/42 (64.29%), Query Frame = 0
Query:   77 EMEQMFVQGPAGMEWGGPTRGGRXXXXXXXXXXXXKGRCSDF 118
            EM +MF+QGPAGMEWGGPTRGG+             GR SDF
Sbjct:   60 EMVEMFIQGPAGMEWGGPTRGGKKPEPTRYGDWERSGRVSDF 101          
BLAST of mRNA_P-wetherbeei_contig6741.1.1 vs. uniprot
Match: A0A024U2R8_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U2R8_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 6.330e-7
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 0
Query:   72 DEDEDEMEQMFVQGPAGMEWGGPTRGGRXXXXXXXXXXXXKGRCSDF 118
            D+DE++ME M + GPAG EWGGP RGG+            KGRC DF
Sbjct:   48 DDDEEDMEDMVMIGPAGTEWGGPQRGGKYKEPTRFGDWEKKGRCCDF 94          
BLAST of mRNA_P-wetherbeei_contig6741.1.1 vs. uniprot
Match: A0A7S2BKF7_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BKF7_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 1.310e-6
Identity = 29/59 (49.15%), Postives = 33/59 (55.93%), Query Frame = 0
Query:   64 KTDACGPVDEDED----EMEQMFVQGPAGMEWGGPTRGGRXXXXXXXXXXXXKGRCSDF 118
            K  ACG  DE+      E E+MFV+ P G+EWGGP RGGR            KGRCSDF
Sbjct:  110 KMAACGLDDEEXXXXXXEWEEMFVETPVGLEWGGPLRGGRMAEPVRFGDWERKGRCSDF 168          
BLAST of mRNA_P-wetherbeei_contig6741.1.1 vs. uniprot
Match: A0A7S1U9V4_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9V4_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 6.280e-6
Identity = 22/45 (48.89%), Postives = 28/45 (62.22%), Query Frame = 0
Query:   74 DEDEMEQMFVQGPAGMEWGGPTRGGRXXXXXXXXXXXXKGRCSDF 118
            DE++ E+M + GPAG EWGGP RGG+            KGRC+DF
Sbjct:   95 DEEDWEEMILDGPAGKEWGGPRRGGKLAEPTRFGDWERKGRCTDF 139          
BLAST of mRNA_P-wetherbeei_contig6741.1.1 vs. uniprot
Match: A0A7S3ZNR7_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNR7_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 1.180e-5
Identity = 36/91 (39.56%), Postives = 42/91 (46.15%), Query Frame = 0
Query:   30 ASDGPRRPAEAAAIPRETPEPPVVRVDRVVLEKTKTDAC--GPVDEDEDEMEQMFVQGPAGMEWGGPTRGGRXXXXXXXXXXXXKGRCSDF 118
            A  G  RP  +AA P +      +   R     TK +      VDED+D ME MFV    G EWGGPTRGGR            KGR +DF
Sbjct:   30 AVSGACRPKSSAAAPADADAGATLAAPRDDPPPTKMNVAVDAEVDEDDD-MEDMFVDTNMGKEWGGPTRGGRMPEPTRFGDWERKGRATDF 119          
BLAST of mRNA_P-wetherbeei_contig6741.1.1 vs. uniprot
Match: A0A7S2F3Q3_9STRA (Succinate dehydrogenase assembly factor 4, mitochondrial n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2F3Q3_9STRA)

HSP 1 Score: 50.8 bits (120), Expect = 1.790e-5
Identity = 32/64 (50.00%), Postives = 35/64 (54.69%), Query Frame = 0
Query:   61 EKT-KTDACGPVDEDEDE-----MEQMFVQGPAGMEWGGPTRGGRXXXXXXXXXXXXKGRCSDF 118
            EKT K D CG VDED        ME+MFV    G+EWGGP RGGR            +GRCSDF
Sbjct:   80 EKTDKFDKCG-VDEDXXXXXXXXMEEMFVATAIGLEWGGPMRGGRMQEPTRFGDWERRGRCSDF 142          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6741.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D7FM82_ECTSI2.120e-950.88Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A7S3GRS8_9STRA2.770e-952.83Succinate dehydrogenase assembly factor 4, mitocho... [more]
W4GYH8_9STRA1.030e-753.19Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A6G0WXB9_9STRA2.310e-753.19Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A482RUU1_9ARCH5.380e-757.14DUF1674 domain-containing protein n=1 Tax=archaeon... [more]
A0A024U2R8_9STRA6.330e-751.06Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A7S2BKF7_9STRA1.310e-649.15Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A7S1U9V4_9STRA6.280e-648.89Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A7S3ZNR7_9STRA1.180e-539.56Succinate dehydrogenase assembly factor 4, mitocho... [more]
A0A7S2F3Q3_9STRA1.790e-550.00Succinate dehydrogenase assembly factor 4, mitocho... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012875Succinate dehydrogenase assembly factor 4PFAMPF07896DUF1674coord: 95..118
e-value: 8.9E-8
score: 32.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6741contigP-wetherbeei_contig6741:677..1033 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6741.1.1mRNA_P-wetherbeei_contig6741.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6741 511..1176 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6741.1.1 ID=prot_P-wetherbeei_contig6741.1.1|Name=mRNA_P-wetherbeei_contig6741.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=119bp
MIRTLLLRSALPTAVSRFTRALPPLAARWASDGPRRPAEAAAIPRETPEP
PVVRVDRVVLEKTKTDACGPVDEDEDEMEQMFVQGPAGMEWGGPTRGGRW
KEPTRFGDWERKGRCSDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012875SDHF4