prot_P-wetherbeei_contig6734.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6734.2.1
Unique Nameprot_P-wetherbeei_contig6734.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length202
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6734.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003368Polymorphic outer membrane protein repeatTIGRFAMTIGR01376TIGR01376coord: 20..42
e-value: 0.0014
score: 16.4
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 2..199
e-value: 1.1E-6
score: 30.0
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 6..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6734contigP-wetherbeei_contig6734:2639..3244 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6734.2.1mRNA_P-wetherbeei_contig6734.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6734 2639..3244 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6734.2.1 ID=prot_P-wetherbeei_contig6734.2.1|Name=mRNA_P-wetherbeei_contig6734.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=202bp
GEKAGAVLVGVGATAMLRNCTFERNQGRLGGGAVASSGDLTVKACRFKDN
ASEAGSGSAIASIKMYAATIPMATVAITGSEFEGNVGRGGAVAIGKGGMT
MLARSVFRENIASDTGGALWLAGGVETISDCSFLSNAAGIIGGAIHVRKT
STGIRRLMNTLFRENSAVGSAGAMAVEDSVGLLDNVTFERNRAGLDGGAL
FI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003368POMP_repeat
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence