prot_P-wetherbeei_contig6725.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6725.1.1
Unique Nameprot_P-wetherbeei_contig6725.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length502
Homology
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: A0A7S1U3H7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U3H7_9STRA)

HSP 1 Score: 119 bits (298), Expect = 7.410e-27
Identity = 75/176 (42.61%), Postives = 104/176 (59.09%), Query Frame = 0
Query:   62 VQKQLEFYFGDSNFRRDRFMKQKA-EEGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSSLIQLSEDGSSIGRTVPLEKANDQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKVLPLPEW 236
            V+ Q+EFYFGD+NFRRD+FMK K  ++  GFI+I  LLTF KL+A+TTD A V  A   S ++++  DG++  R  PL    D +   RS+ + GFG GN E+T D V      FG V + ++RRG      +R   G+VIVEF+  AAA   ++ +  + YK   L  VLP   W
Sbjct:    9 VKAQVEFYFGDANFRRDKFMKGKTRDDPDGFISIDTLLTFNKLKALTTDAAKVAEALAESDVVEVGRDGTAFKRKHPLP--TDSQVKDRSVALKGFGEGNEEVTIDSVTDMVKGFGTVGYVQLRRG-----RDRKFQGTVIVEFAEQAAADELLKRKAELKYKDEALV-VLPCKVW 176          
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: A0A835Z2D4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2D4_9STRA)

HSP 1 Score: 120 bits (302), Expect = 4.730e-26
Identity = 75/191 (39.27%), Postives = 117/191 (61.26%), Query Frame = 0
Query:   48 KAEDAAPPSELMLRVQKQLEFYFGDSNFRRDRFMKQKAEEGK-GFITIQCLLTFKKLQAMTTDPAVVVAAARLSSLIQLSEDGSSIGRTVPLEKANDQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKVLPLPEWL 237
            KAE  A P EL+ +VQ+QLEFYFGDSNF RD+F++++ +  +   + +  L+TF KL++MT D AVV+AAA+ S ++ +SEDG  +GR     +    ++  R+I+  GFG    +L+ +FV   F  FG+V +  +RR     + ++   GSV+VEF   A+A + +  R ++VY    L KVL   E+L
Sbjct:   82 KAETEATP-ELLAKVQRQLEFYFGDSNFNRDKFLREQVKLSEDSLVPLTVLMTFNKLKSMTADEAVVLAAAKQSEVLSVSEDGLRVGRGDGATELR-YDARPRTIYAKGFGYDCPDLSIEFVTDMFKVFGEVGYVYIRR-----TMDKKAKGSVLVEFKEEASALKCLINRGTLVYNGQRLSKVLSYEEYL 265          
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: A0A7S0SSA1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSA1_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.870e-20
Identity = 64/173 (36.99%), Postives = 97/173 (56.07%), Query Frame = 0
Query:   62 VQKQLEFYFGDSNFRRDRFMKQKAE-EGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSSLIQLSEDGSSIGRTVPLEKANDQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEF-----STAAAAARAVEERES--IVYKSAP 226
            ++KQ+EFYF DSNFR+D F+K  A+ + +GF+ I  +LTF KL+ +TTD A V  A   S+++ L +D + + R+ PL +  D  S  ++++V GF      +T D +   F+ +GD+   R+RR      E +   GS  +EF       AA AA  VE +E   I YK  P
Sbjct:    7 IKKQVEFYFSDSNFRKDTFLKAAADSDPEGFVPISVVLTFNKLRNLTTDEAAVANAIENSNVVTLDDDKTRVRRSNPLPE--DDTSKPKTLYVKGFPVEEPIVTIDEITELFSVYGDIAIVRLRR-----DETKKFKGSCFIEFVDREGMLAAIAAANVEGKEGVQISYKGTP 172          
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: UPI0009E5C6B1 (lupus La protein-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5C6B1)

HSP 1 Score: 100 bits (249), Expect = 2.560e-19
Identity = 71/182 (39.01%), Postives = 107/182 (58.79%), Query Frame = 0
Query:   56 SELMLRVQKQLEFYFGDSNFRRDRFMKQKAEEGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSS--LIQLSEDGSSIGR--TVPLEKAN---DQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKV 230
            ++L  ++ KQ+E+YFGD N  RDRF++QKA+E  G++T++CL TF +L+A++ D  V+  A R S   LI++SED   + R  T PL K +    QE+  R+I+  GF     + + D +  FFA  G VT   +R+        R   GSV VEF++   A +AV +RES+ YK   L K+
Sbjct:   15 TDLEKKIIKQIEYYFGDKNLPRDRFLRQKADEDDGWVTLECLGTFNRLKALSEDADVIAKALRKSDSGLIEVSEDNKKVRRVTTKPLPKDSMEARQEAKSRTIYCKGFPK---DTSLDQLEEFFADKGKVTTIIMRK-----DVERIFKGSVFVEFASVDEA-KAVVDRESLKYKEEELIKM 187          
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: UPI000C03D601 (lupus La protein homolog n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C03D601)

HSP 1 Score: 100 bits (249), Expect = 3.130e-19
Identity = 71/184 (38.59%), Postives = 106/184 (57.61%), Query Frame = 0
Query:   55 PSELMLRVQKQLEFYFGDSNFRRDRFMKQKAEEGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSS--LIQLSEDGSSIGRTV--PL-EKANDQESALRS--IFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKVL 231
            PS+L  ++ KQ+EFYFGD N  +DRF++QKAEE  G+IT++CL TF +L+A++ D  V+  A R S   L+++SED   I R +  PL E   +  +A +S  ++  GF   ++    D +  FFA +G V +  +RR        R+  GSV VEFST   A +A    ES+ Y    L K++
Sbjct:   14 PSDLEKKIIKQVEFYFGDKNLPKDRFLRQKAEEDDGWITLECLATFNRLKALSADTDVIANALRKSDAGLVEISEDNKKIRRVLSKPLPENTVEARNAAKSKTVYCKGFPKDSS---LDQLEEFFANYGKVIYIILRR-----DLERSFKGSVFVEFSTVDEA-KAFTLLESVKYNDEELIKMM 188          
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: UPI001CF3ED4F (lupus La protein-like n=2 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF3ED4F)

HSP 1 Score: 99.8 bits (247), Expect = 6.730e-19
Identity = 62/182 (34.07%), Postives = 102/182 (56.04%), Query Frame = 0
Query:   56 SELMLRVQKQLEFYFGDSNFRRDRFMKQKAEEGKGFITIQCLLTFKKLQAMTTDPAVVVAAAR--LSSLIQLSEDGSSIGRTVPLEKAND-----QESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKV 230
            +++  ++ KQ+EFYFGD N+ +D+F+K KAEE  G++T++CL TF +L+++++D  V+  A R  L+ L+++SED   + R        D     QE+  R+++  GF     + T D +  FFA  G V +  ++R   E  E R   GS  VEF++   A +A    ES+ Y    L K+
Sbjct:   16 TDIEKKIIKQVEFYFGDRNYSKDKFLKDKAEEDDGWVTLECLTTFNRLRSLSSDTDVIATALRKSLTGLVEVSEDDKKVRRVKSKPLPEDSVEARQEAKARTVYCKGFPL---DATIDQLEEFFADKGKVVWIAMQRYKKEGEEERLFKGSAFVEFASVDDA-KAFVAMESVKYNEQELIKM 193          
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: A0A2B4R776_STYPI (Lupus La protein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4R776_STYPI)

HSP 1 Score: 100 bits (249), Expect = 8.790e-19
Identity = 71/184 (38.59%), Postives = 106/184 (57.61%), Query Frame = 0
Query:   55 PSELMLRVQKQLEFYFGDSNFRRDRFMKQKAEEGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSS--LIQLSEDGSSIGRTV--PL-EKANDQESALRS--IFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKVL 231
            PS+L  ++ KQ+EFYFGD N  +DRF++QKAEE  G+IT++CL TF +L+A++ D  V+  A R S   L+++SED   I R +  PL E   +  +A +S  ++  GF   ++    D +  FFA +G V +  +RR        R+  GSV VEFST   A +A    ES+ Y    L K++
Sbjct:  283 PSDLEKKIIKQVEFYFGDKNLPKDRFLRQKAEEDDGWITLECLATFNRLKALSADTDVIANALRKSDAGLVEISEDNKKIRRVLSKPLPENTVEARNAAKSKTVYCKGFPKDSS---LDQLEEFFANYGKVIYIILRR-----DLERSFKGSVFVEFSTVDEA-KAFTLLESVKYNDEELIKMM 457          
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: A0A7S3UYZ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UYZ4_HETAK)

HSP 1 Score: 99.8 bits (247), Expect = 1.300e-18
Identity = 57/172 (33.14%), Postives = 101/172 (58.72%), Query Frame = 0
Query:   61 RVQKQLEFYFGDSNFRRDRFMKQK-AEEGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSSLIQLSEDGSSIGRTVPLEKANDQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRV--RRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEK 229
            ++ KQ++FYFGDSNFRRD+F+ ++ +++ +G++ +  LLTF+KL+A+T DP  V  A   S ++++SE  + I R   L   +D +   R+ +V G G  N +++ D + + FA FG++ +CR+  +    +  + R   G+ +VEF T     +A++ R     K    EK
Sbjct:  129 KILKQVDFYFGDSNFRRDKFLLERTSQDPEGYLPLSVLLTFQKLKALTEDPLTVAEAVSSSEIVEVSECKTKIKRKNALPSVDDSDK--RTAYVKGLGFDNPDMSVDALKTIFAPFGEIGWCRLIFKNTNDKGEKKRTFVGTALVEFLTLEGMEKAMDARPEYKGKRLSFEK 298          
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: UPI000A2A8F7B (lupus La protein n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8F7B)

HSP 1 Score: 94.4 bits (233), Expect = 2.460e-18
Identity = 63/178 (35.39%), Postives = 102/178 (57.30%), Query Frame = 0
Query:   61 RVQKQLEFYFGDSNFRRDRFMKQKAEEGKGFITIQCLLTFKKLQAMTTDPAVVVAAARL--SSLIQLSEDGSSIGR--TVPLEKAN---DQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAVEERESIVYKSAPLEKVL 231
            R+ KQ+E+YFGD NF RD+F++QKAEE  G++T+ CL TF +L+AM+ +   +  A +   S L+++S+D   + R  +VPL +      Q +  ++++  GF     E T D +  FF  +G+V +  +RR      + +   GSV VEF+T   A + + E +S  YK   L K+L
Sbjct:   25 RIVKQIEYYFGDKNFPRDKFLRQKAEEDDGWVTLDCLQTFSRLKAMSVENQTLADAIKRANSKLLEVSDDDKKVRRLKSVPLPENTVEARQTAKAKTVYCKGFPK---ETTLDQLEEFFGTYGNVVYIMMRRV----YQTKEFKGSVFVEFTTLEEAKKFLAEEKS-TYKDEELIKML 194          
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Match: A0A482RX93_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX93_9ARCH)

HSP 1 Score: 96.7 bits (239), Expect = 2.600e-18
Identity = 55/154 (35.71%), Postives = 91/154 (59.09%), Query Frame = 0
Query:   62 VQKQLEFYFGDSNFRRDRFMKQKAE-EGKGFITIQCLLTFKKLQAMTTDPAVVVAAARLSSLIQLSEDGSSIGRTVPLEKANDQESALRSIFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSVIVEFSTAAAAARAV 214
            ++KQ+EFYF DSN+R+D F+K  AE +  GF+ I  LLTF +L+ +TTD A V  A   S  + LS +   + R  PL + +  ESA R++++ G+   NA++T + +   ++ +G V + ++R     ++  R   GSV VEF++     +AV
Sbjct:    8 IRKQVEFYFSDSNYRKDTFLKAAAESDPDGFVAISVLLTFNRLKNLTTDVAEVAKAVESSDAVVLSANKDKVKRAEPLPETD--ESASRTLYIKGYPVDNADVTIESIAEQWSPYGKVLYVKMRTFRDRDTNARKFKGSVCVEFASTEGVDKAV 159          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6725.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1U3H7_9STRA7.410e-2742.61Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A835Z2D4_9STRA4.730e-2639.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0SSA1_9STRA3.870e-2036.99Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
UPI0009E5C6B12.560e-1939.01lupus La protein-like n=1 Tax=Orbicella faveolata ... [more]
UPI000C03D6013.130e-1938.59lupus La protein homolog n=1 Tax=Stylophora pistil... [more]
UPI001CF3ED4F6.730e-1934.07lupus La protein-like n=2 Tax=Acropora millepora T... [more]
A0A2B4R776_STYPI8.790e-1938.59Lupus La protein n=1 Tax=Stylophora pistillata Tax... [more]
A0A7S3UYZ4_HETAK1.300e-1833.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
UPI000A2A8F7B2.460e-1835.39lupus La protein n=1 Tax=Exaiptasia diaphana TaxID... [more]
A0A482RX93_9ARCH2.600e-1835.71Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002344Lupus La proteinPRINTSPR00302LUPUSLAcoord: 65..82
score: 58.59
coord: 90..105
score: 25.57
coord: 143..159
score: 24.06
coord: 196..214
score: 30.62
coord: 121..134
score: 36.36
IPR006630La-type HTH domainSMARTSM00715lacoord: 56..135
e-value: 2.8E-22
score: 90.0
IPR006630La-type HTH domainPFAMPF05383Lacoord: 63..118
e-value: 8.6E-15
score: 54.4
IPR006630La-type HTH domainPROSITEPS50961HTH_LAcoord: 52..142
score: 21.648094
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 150..230
e-value: 0.0035
score: 26.6
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 149..226
score: 9.54153
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 46..139
e-value: 3.6E-21
score: 76.7
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 140..232
e-value: 1.8E-8
score: 36.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 247..282
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..50
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 437..469
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 446..468
NoneNo IPR availablePANTHERPTHR22792:SF140LUPUS LA PROTEIN HOMOLOGcoord: 62..247
NoneNo IPR availableCDDcd00590RRM_SFcoord: 151..206
e-value: 0.00643394
score: 33.4325
IPR045180La domain containing proteinPANTHERPTHR22792LUPUS LA PROTEIN-RELATEDcoord: 62..247
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 54..138
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 134..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6725contigP-wetherbeei_contig6725:176..2066 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6725.1.1mRNA_P-wetherbeei_contig6725.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6725 176..2148 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6725.1.1 ID=prot_P-wetherbeei_contig6725.1.1|Name=mRNA_P-wetherbeei_contig6725.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=502bp
MKCVEEKDKTGEADAGVKRKRDEDDEGVSGAAAAETVEPSKEASKKVKAE
DAAPPSELMLRVQKQLEFYFGDSNFRRDRFMKQKAEEGKGFITIQCLLTF
KKLQAMTTDPAVVVAAARLSSLIQLSEDGSSIGRTVPLEKANDQESALRS
IFVDGFGAGNAELTPDFVISFFARFGDVTFCRVRRGPAENSENRAINGSV
IVEFSTAAAAARAVEERESIVYKSAPLEKVLPLPEWLKTLKDAKKKDGEA
AEGGSASSGAGQGGRGEAAAADGHSADDSIAPGGYHRGRVLRISGVSESF
HPVHLRTIVNKLLEDAAPAAAEAAAATAIEGAAADGAVANGSAAAANGAA
ADGGDAAAADGAVAIDDAASPAAEEAAAAAPEDGEAAAPARRFGPCEFVV
SKGGGVMLCRMRTAADAAAIVSISGGRIKLGDAGAKGGSTPEAVEDGAKT
ETKSEAATAEKDAAMDDAPADAAEGATPGKAVTLAKAGVAVPAEGAVVTI
CA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002344Lupus_La
IPR006630La_HTH
IPR000504RRM_dom
IPR036388WH-like_DNA-bd_sf
IPR012677Nucleotide-bd_a/b_plait_sf
IPR045180La_dom_prot
IPR036390WH_DNA-bd_sf
IPR035979RBD_domain_sf