prot_P-wetherbeei_contig6666.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig6666.2.1
Unique Name	prot_P-wetherbeei_contig6666.2.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	398

Homology

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BLAST of mRNA_P-wetherbeei_contig6666.2.1 vs. uniprot
Match: A0A835ZAL5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAL5_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.270e-72
Identity = 122/162 (75.31%), Postives = 135/162 (83.33%), Query Frame = 0

Query:   78 YFSKYGNLSDVTLMRDKYTGQPRGFAFIKYGDPAVVDAVLAA-EHTVDGRAVDVKRAVPRNEAPGPQRQHFTASPRPSADTNKVFVGGLAPSVTVAEFRVYFEGFGGVTDAVVMFDRQTQRSRGFGFVTFDSDAVVQNVLMGTHELNGKMVEVKRAEPKEGR 238
            +FSK+G L+DV LM+DKYTGQPRGF FIK+ DP+V+DAVLA  EH +DGR VDVKRAVP++EAPGP R          AD NKVFVGGLAPSVT AEFR YFEGFG V+DAVVMFDRQTQRSRGFGFVTF  ++VVQNVLMGTHELNGKMVEVK AEPKE R
Sbjct:   37 HFSKFGALADVALMKDKYTGQPRGFGFIKFEDPSVLDAVLAQPEHNIDGRVVDVKRAVPKSEAPGPARATR------QADFNKVFVGGLAPSVTAAEFRQYFEGFGAVSDAVVMFDRQTQRSRGFGFVTFQDESVVQNVLMGTHELNGKMVEVKTAEPKESR 192

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BLAST of mRNA_P-wetherbeei_contig6666.2.1 vs. uniprot
Match: A0A836CMD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMD2_9STRA)

HSP 1 Score: 228 bits (581), Expect = 2.970e-70
Identity = 116/149 (77.85%), Postives = 128/149 (85.91%), Query Frame = 0

Query:   78 YFSKYGNLSDVTLMRDKYTGQPRGFAFIKYGDPAVVDAVLA-AEHTVDGRAVDVKRAVPRNEAPGPQRQHFTASPRPSADTNKVFVGGLAPSVTVAEFRVYFEGFGGVTDAVVMFDRQTQRSRGFGFVTFDSDAVVQNVLMGTHELNGK 225
            YFSK+G L+DV LM+DKYTGQPRGF FIK+ DPAVVD VL  AEH++DGR VDVKRAVP++EAPGP R   TA P   ADTNKVFVGGLAPSVTVAEFR YFEGFG V+DAVVMFDRQT RSRGFGFVTF  D+VVQNVLMGTHE+NG+
Sbjct:   42 YFSKFGALADVALMKDKYTGQPRGFGFIKFEDPAVVDVVLTQAEHSIDGRTVDVKRAVPKSEAPGPSR---TARP---ADTNKVFVGGLAPSVTVAEFRTYFEGFGAVSDAVVMFDRQTLRSRGFGFVTFQEDSVVQNVLMGTHEINGE 184

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BLAST of mRNA_P-wetherbeei_contig6666.2.1 vs. uniprot
Match: D7FW71_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW71_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 7.510e-69
Identity = 115/166 (69.28%), Postives = 136/166 (81.93%), Query Frame = 0

Query:   76 RTYFSKYGNLSDVTLMRDKYTGQPRGFAFIKYGDPAVVDAVLAAEHTVDGRAVDVKRAVPRNEAPGPQRQHFTASPRPSADTNKVFVGGLAPSVTVAEFRVYFEGFGGVTDAVVMFDRQTQRSRGFGFVTFDSDAVVQNVLMGTHELNGKMVEVKRAEPKEGRGGR 241
            R +F KYG L+D+ LM+DKYTG PRGF FIK+ D  V+D +L+ EH +DG+ VDVKRAVP++EAPGP  +    S RP A+TNK+FVGGLAP+V +AEFR YFE FGGV DAVVMFDRQTQRSRGFGFVTF  DAVV +++MGTHE+NGKMVEVKRAEPKE R GR
Sbjct:  165 RHHFGKYGTLADIALMKDKYTGHPRGFGFIKFEDITVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSR----SSRP-AETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHDIMMGTHEINGKMVEVKRAEPKENRSGR 325

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BLAST of mRNA_P-wetherbeei_contig6666.2.1 vs. uniprot
Match: A0A6H5JV91_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV91_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 1.680e-63
Identity = 107/151 (70.86%), Postives = 124/151 (82.12%), Query Frame = 0

Query:   91 MRDKYTGQPRGFAFIKYGDPAVVDAVLAAEHTVDGRAVDVKRAVPRNEAPGPQRQHFTASPRPSADTNKVFVGGLAPSVTVAEFRVYFEGFGGVTDAVVMFDRQTQRSRGFGFVTFDSDAVVQNVLMGTHELNGKMVEVKRAEPKEGRGGR 241
            M+DKYTG PRGF FIK+ D  V+D +L+ EH +DG+ VDVKRAVP++EAPGP  +    S RP A+TNK+FVGGLAP+V +AEFR YFE FGGV DAVVMFDRQTQRSRGFGFVTF  DAVV  ++MGTHE+NGKMVEVKRAEPKE R GR
Sbjct:    1 MKDKYTGHPRGFGFIKFEDVTVLDEILSQEHKIDGKVVDVKRAVPKSEAPGPSSR----SSRP-AETNKIFVGGLAPTVMMAEFRKYFETFGGVVDAVVMFDRQTQRSRGFGFVTFQEDAVVHEIMMGTHEINGKMVEVKRAEPKENRSGR 146

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BLAST of mRNA_P-wetherbeei_contig6666.2.1 vs. uniprot
Match: F0WG76_9STRA (Uncharacterized protein AlNc14C88G5606 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WG76_9STRA)

HSP 1 Score: 197 bits (500), Expect = 8.230e-55
Identity = 103/184 (55.98%), Postives = 129/184 (70.11%), Query Frame = 0

Query:   76 RTYFSKYGNLSDVTLMRDKYTGQPRGFAFIKYGDPAVVDAVLAAEHTVDGRAVDVKRAVPRNE-APGPQRQHFTA------SPRPSADTNKVFVGGLAPSVTVAEFRVYFEGFGGVTDAVVMFDRQTQRSRGFGFVTFDSDAVVQNVLMGTHELNGKMVEVKRAEPKEGRGGRHAAAGYAAGYG 252
            R +F KYG L+D  LM+DK++GQPRGF F+ + D AV+D VL   HT+DGR V+VKRA+PR++ A GP     +       S     ++ KVFVGGL PSVT  +FR YFE FG +TDAVVMFDR+TQRSRGFGFVTF+ +  V  V+  THEL+GK+VE+KRAEPKE R G     GY+ GYG
Sbjct:  119 RDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADVAVLDRVLEESHTIDGRTVEVKRAIPRDKTASGPSDVRSSGAHGRGNSGGVITESKKVFVGGLPPSVTEQDFRRYFEEFGRITDAVVMFDRETQRSRGFGFVTFEEEGAVAEVISKTHELHGKVVEIKRAEPKEARSG----GGYSGGYG 298

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BLAST of mRNA_P-wetherbeei_contig6666.2.1 vs. uniprot
Match: A0A1V9ZI01_9STRA (DAZ-associated protein 1-like n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZI01_9STRA)

HSP 1 Score: 193 bits (491), Expect = 6.530e-54
Identity = 103/186 (55.38%), Postives = 131/186 (70.43%), Query Frame = 0

Query:   76 RTYFSKYGNLSDVTLMRDKYTGQPRGFAFIKYGDPAVVDAVLAAEHTVDGRAVDVKRAVPRN-EAPGPQ-------RQHFTASPRPSADTNKVFVGGLAPSVTVAEFRVYFEGFGGVTDAVVMFDRQTQRSRGFGFVTFDSDAVVQNVLMGTHELNGKMVEVKRAEPK-EGRGGRHAAAGYAAGYG 252
            R++F KYGNL+D  LM+DKY+GQPRGF F+ + DP+V+D VL   H +DGR V+VKRAVPR+ +   PQ          F  S R   ++ K+FVGGL PSVT  +FR YFE +G +TDA+VM DR TQRSRGFGFVTF+ +  V  V+  +HEL+GK+VE+KRAEPK E RGGR    GY +GYG
Sbjct:   93 RSHFGKYGNLTDAALMKDKYSGQPRGFGFVTFEDPSVIDRVLGDTHMLDGRNVEVKRAVPRDSQGARPQGGASSGYSDRFAGSGR--TESKKIFVGGLPPSVTNDDFRTYFEDYGKITDAIVMMDRDTQRSRGFGFVTFEEEGAVAEVISKSHELHGKVVEIKRAEPKGEMRGGR---GGYDSGYG 273

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BLAST of mRNA_P-wetherbeei_contig6666.2.1 vs. uniprot
Match: A0A7S2XZ50_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ50_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.930e-52
Identity = 91/164 (55.49%), Postives = 119/164 (72.56%), Query Frame = 0

Query:   76 RTYFSKYGNLSDVTLMRDKYTGQPRGFAFIKYGDPAVVDAVLAAEHTVDGRAVDVKRAVPRNEAPGPQRQHFTASPRPSADTNKVFVGGLAPSVTVAEFRVYFEGFGGVTDAVVMFDRQTQRSRGFGFVTFDSDAVVQNVLMGTHELNGKMVEVKRAEPKEGRG 239
            R YF K+G L+DV +M+DK+TGQPRGF F+ + D +VV+ VL   HT+DGR VD KRAV R E+  P+   +        ++ K+FVGGLAPSV   +FR YF+ FG +TDAVVM DR T RSRGFGFVT+D ++ V++VL G+HE+ GK VEVKRAEP++ RG
Sbjct:   22 RYYFEKFGELTDVAVMKDKFTGQPRGFGFVTFKDTSVVEKVLGQTHTLDGRQVDCKRAVRREESSAPRGGGY------GGESKKIFVGGLAPSVEEDDFRGYFDKFGTITDAVVMMDRNTGRSRGFGFVTYDDESSVRDVLAGSHEIKGKFVEVKRAEPRQDRG 179

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BLAST of mRNA_P-wetherbeei_contig6666.2.1 vs. uniprot
Match: A0A067DA27_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067DA27_SAPPC)

HSP 1 Score: 189 bits (480), Expect = 3.370e-52
Identity = 98/185 (52.97%), Postives = 131/185 (70.81%), Query Frame = 0

Query:   76 RTYFSKYGNLSDVTLMRDKYTGQPRGFAFIKYGDPAVVDAVLAAEHTVDGRAVDVKRAVPRNE--------APGPQRQHFTASPRPSADTNKVFVGGLAPSVTVAEFRVYFEGFGGVTDAVVMFDRQTQRSRGFGFVTFDSDAVVQNVLMGTHELNGKMVEVKRAEPK-EGRGGRHAAAGYAAGY 251
            R++F KYG L+D  LM+DKY+GQPRGF F+ + DP+V++ VL+  HT+DGR V+VKRAVPR+         + G     + +  R S ++ K+FVGGL PSVT  +FR YFE +G +TDA+VM DR TQRSRGFGFV+F+ +  V  V+  +HEL+GK+VE+KRAEPK E RGGR    GY +GY
Sbjct:   95 RSHFGKYGALTDAALMKDKYSGQPRGFGFVTFEDPSVIERVLSDTHTLDGRNVEVKRAVPRDSQGARPQGGSAGGYSDRYASGGR-STESKKIFVGGLPPSVTNDDFRTYFEDYGKITDAIVMMDRDTQRSRGFGFVSFEEEGAVAEVISKSHELHGKVVEIKRAEPKGEMRGGR---GGYDSGY 275

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BLAST of mRNA_P-wetherbeei_contig6666.2.1 vs. uniprot
Match: A0A8K1C8M2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C8M2_PYTOL)

HSP 1 Score: 189 bits (479), Expect = 1.430e-51
Identity = 95/177 (53.67%), Postives = 118/177 (66.67%), Query Frame = 0

Query:   76 RTYFSKYGNLSDVTLMRDKYTGQPRGFAFIKYGDPAVVDAVLAAEHTVDGRAVDVKRAVPRNE-APGPQRQHFTAS------------PRPSADTNKVFVGGLAPSVTVAEFRVYFEGFGGVTDAVVMFDRQTQRSRGFGFVTFDSDAVVQNVLMGTHELNGKMVEVKRAEPKEGRG 239
            R +F KYG L+D  LM+DK+TGQPRGF F+ + D   +D VL   H +DGR V+VKRA+PR++ APGP    F                    ++ K+FVGGLAPSVT  +FR YFE FG +TDAVVM DR TQRSRGFGFVTFD +  V  V+  +HE++GK VE+KRAEPKE RG
Sbjct:  116 RGHFGKYGALTDAALMKDKFTGQPRGFGFVTFADATAIDRVLEESHVIDGRTVEVKRAIPRDKTAPGPSDGRFGGGYGRXXXXXXXXXXXGYTESKKIFVGGLAPSVTEQDFRQYFEEFGKITDAVVMIDRDTQRSRGFGFVTFDEEGAVAEVISKSHEIHGKTVEIKRAEPKEVRG 292

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BLAST of mRNA_P-wetherbeei_contig6666.2.1 vs. uniprot
Match: A0A3M6VT05_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VT05_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.260e-51
Identity = 95/172 (55.23%), Postives = 122/172 (70.93%), Query Frame = 0

Query:   76 RTYFSKYGNLSDVTLMRDKYTGQPRGFAFIKYGDPAVVDAVLAAEHTVDGRAVDVKRAVPRNE-APGPQ------RQHFTASPRPSADTNKVFVGGLAPSVTVAEFRVYFEGFGGVTDAVVMFDRQTQRSRGFGFVTFDSDAVVQNVLMGTHELNGKMVEVKRAEPKEGRGG 240
            R +F KYG L+D  LM+DKYTGQPRGF F+ + D + +D VL   HT+DGR+V+VKRA+PR   APG        R  F++      +  K+FVGGLAP+VT  +FR YFE FG  TDAVVM DR TQRSRGFGF+TF+ ++ V  V+  +HE++GK+VE+KRAEPKE RGG
Sbjct:  132 RQHFGKYGPLTDAALMKDKYTGQPRGFGFVTFADASAIDRVLEETHTLDGRSVEVKRAIPRERTAPGSSEIRGGGRGGFSSGG--FTEQKKIFVGGLAPTVTEQDFRHYFEEFGKTTDAVVMIDRDTQRSRGFGFITFEEESSVAEVISKSHEIHGKIVEIKRAEPKESRGG 301

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig6666.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig6666.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZAL5_9STRA	1.270e-72	75.31	Uncharacterized protein (Fragment) n=1 Tax=Tribone...	[more]
A0A836CMD2_9STRA	2.970e-70	77.85	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D7FW71_ECTSI	7.510e-69	69.28	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5JV91_9PHAE	1.680e-63	70.86	RRM domain-containing protein n=1 Tax=Ectocarpus s...	[more]
F0WG76_9STRA	8.230e-55	55.98	Uncharacterized protein AlNc14C88G5606 n=1 Tax=Alb...	[more]
A0A1V9ZI01_9STRA	6.530e-54	55.38	DAZ-associated protein 1-like n=1 Tax=Achlya hypog...	[more]
A0A7S2XZ50_9STRA	1.930e-52	55.49	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A067DA27_SAPPC	3.370e-52	52.97	Uncharacterized protein n=2 Tax=Saprolegnia TaxID=...	[more]
A0A8K1C8M2_PYTOL	1.430e-51	53.67	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
A0A3M6VT05_9STRA	2.260e-51	55.23	Uncharacterized protein n=1 Tax=Peronospora effusa...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 60..131 e-value: 1.8E-8 score: 44.1 coord: 159..230 e-value: 1.0E-20 score: 84.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 76..119 e-value: 4.1E-7 score: 29.7 coord: 160..216 e-value: 2.1E-12 score: 46.7
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 158..234 score: 16.261356
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 63..135 score: 11.844008
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 63..139 e-value: 7.3E-19 score: 69.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 143..273 e-value: 2.5E-24 score: 87.9
None	No IPR available	PANTHER	PTHR48032	RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6	coord: 73..351
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 150..261
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 76..151

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig6666	contig	P-wetherbeei_contig6666:298..1491 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig6666.2.1	mRNA_P-wetherbeei_contig6666.2.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig6666 298..1677 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig6666.2.1 ID=prot_P-wetherbeei_contig6666.2.1|Name=mRNA_P-wetherbeei_contig6666.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=398bp
MRTLDQFHLSCASGGRILCRLETRLARCWLRPLRTRCLPTLILAGVCASQ
PPAKNASCCFPSLTHFPSRAKTQPYRTYFSKYGNLSDVTLMRDKYTGQPR
GFAFIKYGDPAVVDAVLAAEHTVDGRAVDVKRAVPRNEAPGPQRQHFTAS
PRPSADTNKVFVGGLAPSVTVAEFRVYFEGFGGVTDAVVMFDRQTQRSRG
FGFVTFDSDAVVQNVLMGTHELNGKMVEVKRAEPKEGRGGRHAAAGYAAG
YGGGGGGRRANSGAYLGGRGASAYGLYSAFSGANGYPAAYGYGGYGGYGA
FAGYANGYSPASFAAAYRGAAAAAAAAGFTGDGAGPTQYVSMPASAAAFG
SSGAGSGPEAAPQFAEYAAALRSHGAAAASQQARMETAAAAAYSAHY*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf