prot_P-wetherbeei_contig663.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig663.3.1
Unique Nameprot_P-wetherbeei_contig663.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length252
Homology
BLAST of mRNA_P-wetherbeei_contig663.3.1 vs. uniprot
Match: A0A438JHV4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JHV4_VITVI)

HSP 1 Score: 98.6 bits (244), Expect = 1.020e-19
Identity = 82/244 (33.61%), Postives = 119/244 (48.77%), Query Frame = 0
Query:    2 TADTMRLLLALAAEFGFEIHQLDVVTAYLNAVLEEELYMSAPLGIA--GLEGCLGLKLLKALYGLKQAAYLWHLCRQTLLIEEQGFRPNDADCCVSCVARQRTPVAAAGGDGSCLAIGTHVDDLLLTTGYPVSAI-------TH----------RLQGVKLETLIKQDLVNGTVHLSQQHYIDELLGRFLMQEAWPLLTPAERS-RTDAAQAPAMPAEISAMATTPYRPGAGRDHAVVLCRRHD 225
            T D+ R+++A+ A F  E+HQ+DV TA+LN VL+EE+YM  P+G    G E  L  KL K++YGLKQA+  W+L +   +I + GF+ N  D C+         +  +G   S + +  +VDD+LL +  P   I       TH           + G+K    I +D  NG + LSQ+ YI+ +L RF M        P  +  +   AQ P    E   M T PY    G      +C R D
Sbjct: 1006 TKDSFRVIMAIVAHFDLELHQMDVKTAFLNGVLDEEVYMEQPIGFVEVGKED-LVCKLNKSIYGLKQASRQWYL-KFDKIITQNGFKENTVDRCIY--------LRVSGS--SYIFLVLYVDDILLASNDPDLLIETKHILSTHFDMKDLGEASYVLGIK----ILRDRANGVLKLSQRAYIERILKRFNMHNCKSTKAPIVKGDKFSKAQCPQNDDEREEMKTIPYSSVVGSLMYAQVCTRPD 1233          
BLAST of mRNA_P-wetherbeei_contig663.3.1 vs. uniprot
Match: A0A4S4L1T1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Bondarzewia mesenterica TaxID=1095465 RepID=A0A4S4L1T1_9AGAM)

HSP 1 Score: 98.2 bits (243), Expect = 1.050e-19
Identity = 83/239 (34.73%), Postives = 114/239 (47.70%), Query Frame = 0
Query:    5 TMRLLLALAAEFGFEIHQLDVVTAYLNAVLEEELYMSAPLGIA--GLEGCLGLKLLKALYGLKQAAYLWH--LCRQTLLIEEQGFRPNDADCCVSCVARQRTPVAAAGGDGSCLAIGTHVDDLLLTTGYPVS------AITHRLQGVKLETL-------IKQDLVNGTVHLSQQHYIDELLGRFLMQEAWPLLTPAE-RSRTDAAQAPAMPAEISAMATTPYRPGAGRDHAVVLCRRHD 225
            ++R+LLALAA F +EIHQ+DV  A+LN  LEEE+YM  P G A  GLE  +  +L+K +YGLKQ++  W+  LC       E GF+         C              G+   I   VDD  L     V+      A+ H  +   L  +       IK+D    T+ LSQ+ YID +L RF ++ A PL T  +  SR   +Q P+MP +   M   PY+   G      L  R D
Sbjct:  155 SIRVLLALAARFDWEIHQMDVKNAFLNGDLEEEIYMKQPPGYAAPGLEDKV-CRLIKTIYGLKQSSQRWYKKLCDAFF---EMGFKV--------CSVEHGIFTKHDETKGTISIIAASVDDFALLANSLVAIDEMKDALNHAFEMTDLGEIHWLLGIEIKRDRGARTISLSQRAYIDTILSRFNLENANPLSTATDPNSRLSISQCPSMPHQFEEMRNVPYQEAIGSVMYAALAARPD 381          
BLAST of mRNA_P-wetherbeei_contig663.3.1 vs. uniprot
Match: A0A2K3LA50_TRIPR (Putative retrotransposon Ty1-copia subclass protein (Fragment) n=2 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3LA50_TRIPR)

HSP 1 Score: 98.2 bits (243), Expect = 1.250e-19
Identity = 80/237 (33.76%), Postives = 113/237 (47.68%), Query Frame = 0
Query:    4 DTMRLLLALAAEFGFEIHQLDVVTAYLNAVLEEELYMSAPLGIAGLEG-CLGLKLLKALYGLKQAAYLWHLCRQTLLIEEQGFRPNDADCCVSCVARQRTPVAAAGGDGSCLAIGTHVDDLLLTTG-----YPVSAITHRLQGVK--------LETLIKQDLVNGTVHLSQQHYIDELLGRFLMQEAWPLLTPAERS-RTDAAQAPAMPAEISAMATTPYRPGAGRDHAVVLCRRHD 225
            D+ R+++AL A F FE+HQ+DV TA+LN  LEEE+YM  P G    EG  L  KL +++YGLKQA+  W+L +   +I   GF  N  D C+              G   C  +  +VDD+LL T      Y V     R   +K        +   I +D   G + LSQ+ YI+++L RF M+   P + P  +  R + +Q P    E   M   PY    G      +C R D
Sbjct:  524 DSFRVIMALVAHFNFELHQMDVKTAFLNGSLEEEVYMKQPEGFYSSEGENLVCKLNRSIYGLKQASRQWYL-KFHEVITSFGFEENVMDQCI---------YQKVSGSHICFLV-LYVDDILLATNDKGMLYEVKQFLSRNFDMKDMGEASYVIGIKIHRDRNRGILGLSQEAYINKVLERFNMKNCSPSVAPIVKGDRFELSQCPQNDFEREHMKNIPYASAVGSLMYAQVCTRPD 749          
BLAST of mRNA_P-wetherbeei_contig663.3.1 vs. uniprot
Match: A0A0V1FL71_TRIPS (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trichinella pseudospiralis TaxID=6337 RepID=A0A0V1FL71_TRIPS)

HSP 1 Score: 95.5 bits (236), Expect = 1.060e-18
Identity = 74/224 (33.04%), Postives = 116/224 (51.79%), Query Frame = 0
Query:    5 TMRLLLALAAEFGFEIHQLDVVTAYLNAVLEEELYMSAPLGIAGLEGCLGLKLLKALYGLKQAAYLWH-LCRQTLLIEEQGFRPNDADCCVSCVARQRTPVAAAGGDGSCLAIGTHVDDLLLTTGYPVSAITHRL---QGVKLETL----------IKQDLVNGTVHLSQQHYIDELLGRFLMQEAWPLLTPAERSRT-DAAQAPAMPAEISAMATTPYRPGAG 213
            ++R LL+LAA++  E+ Q+DVVTA+LN  L EE+YM  P G+ G E     +L K++YGLKQA+  W+ +  +TL     G      + C+  + + +T           LA+G +VDDLL+ +    S    ++   +  K++ L          I QD+ NGT+ + Q+ YI+E+L RF M +   + TP + ++    A  P    EI  M   PYR   G
Sbjct:  470 SLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNEEIYMELPSGV-GDENNKYCRLRKSIYGLKQASRAWYGMLDETL--RSFGLNRLKNEPCIYFLRKNKT----------FLAVGVYVDDLLILSNNESSKNELKMALCERFKMKDLGKAHWCLGIRIVQDVENGTLSIDQEQYIEEMLHRFRMSDCKGVKTPLDPNQVLSKAMMPRSDEEIKQMHAVPYREAVG 680          
BLAST of mRNA_P-wetherbeei_contig663.3.1 vs. uniprot
Match: A0A0V1APU2_TRISP (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trichinella spiralis TaxID=6334 RepID=A0A0V1APU2_TRISP)

HSP 1 Score: 95.5 bits (236), Expect = 1.130e-18
Identity = 74/224 (33.04%), Postives = 116/224 (51.79%), Query Frame = 0
Query:    5 TMRLLLALAAEFGFEIHQLDVVTAYLNAVLEEELYMSAPLGIAGLEGCLGLKLLKALYGLKQAAYLWH-LCRQTLLIEEQGFRPNDADCCVSCVARQRTPVAAAGGDGSCLAIGTHVDDLLLTTGYPVSAITHRL---QGVKLETL----------IKQDLVNGTVHLSQQHYIDELLGRFLMQEAWPLLTPAERSRT-DAAQAPAMPAEISAMATTPYRPGAG 213
            ++R LL+LAA++  E+ Q+DVVTA+LN  L EE+YM  P G+ G E     +L K++YGLKQA+  W+ +  +TL     G      + C+  + + +T           LA+G +VDDLL+ +    S    ++   +  K++ L          I QD+ NGT+ + Q+ YI+E+L RF M +   + TP + ++    A  P    EI  M   PYR   G
Sbjct:  810 SLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNEEIYMELPSGV-GDENNKYCRLRKSIYGLKQASRAWYGMLDETL--RSFGLNRLKNEPCIYFLRKNKT----------FLAVGVYVDDLLILSNNESSKNELKMALCERFKMKDLGKAHWCLGIRIVQDVENGTLSIDQEQYIEEMLHRFRMSDCKGVKTPLDPNQVLSKAMMPRSDEEIKQMHAVPYREAVG 1020          
BLAST of mRNA_P-wetherbeei_contig663.3.1 vs. uniprot
Match: A0A0V1LKZ5_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Trichinella nativa TaxID=6335 RepID=A0A0V1LKZ5_9BILA)

HSP 1 Score: 95.1 bits (235), Expect = 1.370e-18
Identity = 73/223 (32.74%), Postives = 113/223 (50.67%), Query Frame = 0
Query:    5 TMRLLLALAAEFGFEIHQLDVVTAYLNAVLEEELYMSAPLGIAGLEGCLGLKLLKALYGLKQAAYLWHLCRQTLLIEEQGFRPNDADCCVSCVARQRTPVAAAGGDGSCLAIGTHVDDLLLTTGYPVSAITHRL---QGVKLETL----------IKQDLVNGTVHLSQQHYIDELLGRFLMQEAWPLLTPAERSRT-DAAQAPAMPAEISAMATTPYRPGAG 213
            ++R LL+LAA++  E+ Q+DVVTA+LN  L EE+YM  P G+ G E     +L K++YGLKQA+  W+     +L    G      + C+  + + +            LA+G +VDDLL+ +    S    ++   +  K++ L          I QD+ NGT+ + Q+ YI+ELL RF M +   + TP + ++    A  P    EI  M   PYR   G
Sbjct:  367 SLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNEEIYMELPTGV-GDENNKYCRLRKSIYGLKQASRAWYGMLDDIL-RSFGLNRLKNEPCIYFLWKNKI----------FLAVGVYVDDLLILSNNESSKNELKMALCERFKMKDLGKAHWCLGIRIVQDVENGTLSIDQERYIEELLHRFRMSDCKEVKTPLDHNQALSKAMMPRSDEEIKQMHAVPYREAVG 577          
BLAST of mRNA_P-wetherbeei_contig663.3.1 vs. uniprot
Match: A0A2R6RYD4_ACTCC (Endonuclease n=2 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RYD4_ACTCC)

HSP 1 Score: 95.1 bits (235), Expect = 1.560e-18
Identity = 83/238 (34.87%), Postives = 120/238 (50.42%), Query Frame = 0
Query:    5 TMRLLLALAAEFGFEIHQLDVVTAYLNAVLEEELYMSAPLG--IAGLEGCLGLKLLKALYGLKQAAYLWHLCRQTLLIEEQGFRPNDADCCVSCVARQRTPVAAAGGDGSCLAIGTHVDDLLLTTGYPVSAITHRLQ----------GVKLETL---IKQDLVNGTVHLSQQHYIDELLGRFLMQEAW-PLLTP-AERSRTDAAQAPAMPAEISAMATTPYRPGAGRDHAVVLCRRHD 225
            ++R+LLAL A+F  E+ QLDV TA+L+  LEEE+YMS P G  + G E  L  +L K+LYGLKQ+   W+  R  L ++E G+  +  D CV     Q         DGS + +  +VDD+L+ +   V     + Q          G   + L   IK+D V GTV L+Q  Y+ ++L RF +  +  P+ TP A   R  A+ +P    E   M   PY    G     ++C R D
Sbjct:  900 SIRILLALVAQFDLELAQLDVKTAFLHGDLEEEIYMSQPAGFQVPGKEH-LACRLKKSLYGLKQSPRQWYK-RFDLFMDEHGYTRSQFDHCVYFRKLQ---------DGSMIYLLLYVDDMLIASKSKVEIDRLKAQLSREFEMKDLGEAKKILGMEIKRDRVKGTVWLTQSQYLKKVLQRFGIDSSTKPVSTPLASHFRLSASMSPHTEDERKHMENIPYANAVGALMYAMVCTRPD 1126          
BLAST of mRNA_P-wetherbeei_contig663.3.1 vs. uniprot
Match: A0A4V1T1E6_9SPHI (Uncharacterized protein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4V1T1E6_9SPHI)

HSP 1 Score: 94.7 bits (234), Expect = 2.050e-18
Identity = 77/237 (32.49%), Postives = 111/237 (46.84%), Query Frame = 0
Query:    4 DTMRLLLALAAEFGFEIHQLDVVTAYLNAVLEEELYMSAPLGIAGLEG-CLGLKLLKALYGLKQAAYLWHLCRQTLLIEEQGFRPNDADCCVSCVARQRTPVAAAGGDGSCLAIGTHVDDLLLTTG-----YPVSAITHRLQGVK--------LETLIKQDLVNGTVHLSQQHYIDELLGRFLMQEAWPLLTPAERS-RTDAAQAPAMPAEISAMATTPYRPGAGRDHAVVLCRRHD 225
            D++R ++AL A F FE+HQ+DV TA+LN  LEEE+YM  P G +   G  L  KL K++YGLKQA+  W+L    + I   GF  N  D C+              G   C  +  +VDD+LL T      Y V     +   +K        +   I ++   G + LSQ+ YI+++L RF M++  P + P  +  +    Q P    E   M   PY    G      +C R D
Sbjct:  889 DSLRTIMALVAHFDFELHQMDVKTAFLNGDLEEEVYMKQPEGFSSSHGEHLVCKLNKSIYGLKQASRQWYLKFHDV-ITSFGFEENVMDQCI---------YQKVSGSKICFLV-LYVDDILLATNDNGMLYEVKQFLSKNFDMKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFRMKDCSPSIAPVVKGDKFSLDQCPKNDLERDQMKNIPYASAVGSLMYAQVCTRPD 1114          
BLAST of mRNA_P-wetherbeei_contig663.3.1 vs. uniprot
Match: A0A293MM55_ORNER (Reverse transcriptase, gag, polyprotein (Fragment) n=1 Tax=Ornithodoros erraticus TaxID=265619 RepID=A0A293MM55_ORNER)

HSP 1 Score: 94.7 bits (234), Expect = 2.090e-18
Identity = 70/199 (35.18%), Postives = 104/199 (52.26%), Query Frame = 0
Query:    4 DTMRLLLALAAEFGFEIHQLDVVTAYLNAVLEEELYMSAPLGIAGLEGCLGLKLLKALYGLKQAAYLWHLCRQTLLIEEQGFRPNDADCCVSCVARQRTPVAAAGGDGSCLAIGTHVDDLLLTTGYPVSAITHRLQ--GVKLETL------------IKQDLVNGTVHLSQQHYIDELLGRFLMQEAWPLLTPAERSRT 188
            D++RLLLA+A   G  + QLDV TAYL+ +LEEE+YM  P G    +G +  KL K+LYGLKQ+   W++     L ++ G++  + D CV     Q   V           IG +VDD+L+       A+ + +Q  G K+E              +K+D   GT+ +SQ+ YI E+L R+ M+   P+ TP E   T
Sbjct:  923 DSLRLLLAIANSEGMVMRQLDVKTAYLHGILEEEVYMEQPQGFCKKQGDV-CKLNKSLYGLKQSGRTWYMTLDATL-QKLGYKRLETDRCVFIRQTQVDKVI----------IGVYVDDMLMVATSE-RALRNAIQALGEKIELKDLGEPKYILGLEVKRDKTQGTISISQKKYIGEVLKRYGMENCKPVSTPIEPGLT 1108          
BLAST of mRNA_P-wetherbeei_contig663.3.1 vs. uniprot
Match: A0A0V1APS7_TRISP (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=25 Tax=Trichinella TaxID=6333 RepID=A0A0V1APS7_TRISP)

HSP 1 Score: 94.4 bits (233), Expect = 2.840e-18
Identity = 74/224 (33.04%), Postives = 116/224 (51.79%), Query Frame = 0
Query:    5 TMRLLLALAAEFGFEIHQLDVVTAYLNAVLEEELYMSAPLGIAGLEGCLGLKLLKALYGLKQAAYLWH-LCRQTLLIEEQGFRPNDADCCVSCVARQRTPVAAAGGDGSCLAIGTHVDDLLLTTGYPVSAITHRL---QGVKLETL----------IKQDLVNGTVHLSQQHYIDELLGRFLMQEAWPLLTPAERSRT-DAAQAPAMPAEISAMATTPYRPGAG 213
            ++R LL+LAA++  E+ Q+DVVTA+LN  L EE+YM  P G+ G E     +L K++YGLKQA+  W+ +  +TL     G      + C+  + + +T           LA+G +VDDLL+ +    S    ++   +  K++ L          I QD+ NGT+ + Q+ YI+E+L RF M +   + TP + ++    A  P    EI  M   PYR   G
Sbjct:  903 SLRYLLSLAAKYNLEVDQMDVVTAFLNPSLNEEIYMELPSGV-GDENNKYCRLRKSIYGLKQASRAWYGMLDETL--RSFGLNRLKNEPCIYFLWKNKT----------FLAVGVYVDDLLILSNNESSKNELKMALCERFKMKDLGKAHWCLGIRIVQDVENGTLSIDQEQYIEEMLHRFRMSDCKGVKTPYDPNQVLSKAMMPRSDEEIKQMHAVPYREAVG 1113          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig663.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438JHV4_VITVI1.020e-1933.61Retrovirus-related Pol polyprotein from transposon... [more]
A0A4S4L1T1_9AGAM1.050e-1934.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2K3LA50_TRIPR1.250e-1933.76Putative retrotransposon Ty1-copia subclass protei... [more]
A0A0V1FL71_TRIPS1.060e-1833.04Retrovirus-related Pol polyprotein from transposon... [more]
A0A0V1APU2_TRISP1.130e-1833.04Retrovirus-related Pol polyprotein from transposon... [more]
A0A0V1LKZ5_9BILA1.370e-1832.74Retrovirus-related Pol polyprotein from transposon... [more]
A0A2R6RYD4_ACTCC1.560e-1834.87Endonuclease n=2 Tax=Actinidia chinensis var. chin... [more]
A0A4V1T1E6_9SPHI2.050e-1832.49Uncharacterized protein (Fragment) n=1 Tax=Sphingo... [more]
A0A293MM55_ORNER2.090e-1835.18Reverse transcriptase, gag, polyprotein (Fragment)... [more]
A0A0V1APS7_TRISP2.840e-1833.04Retrovirus-related Pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 4..129
e-value: 2.0E-21
score: 76.7
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 5..186

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig663contigP-wetherbeei_contig663:5386..6191 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig663.3.1mRNA_P-wetherbeei_contig663.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig663 5224..6246 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig663.3.1 ID=prot_P-wetherbeei_contig663.3.1|Name=mRNA_P-wetherbeei_contig663.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=252bp
MTADTMRLLLALAAEFGFEIHQLDVVTAYLNAVLEEELYMSAPLGIAGLE
GCLGLKLLKALYGLKQAAYLWHLCRQTLLIEEQGFRPNDADCCVSCVARQ
RTPVAAAGGDGSCLAIGTHVDDLLLTTGYPVSAITHRLQGVKLETLIKQD
LVNGTVHLSQQHYIDELLGRFLMQEAWPLLTPAERSRTDAAQAPAMPAEI
SAMATTPYRPGAGRDHAVVLCRRHDAPGDSQRRPCPDTFLQLPRASALAR
R*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2