prot_P-wetherbeei_contig6629.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6629.1.1
Unique Nameprot_P-wetherbeei_contig6629.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length64
Homology
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BLAST of mRNA_P-wetherbeei_contig6629.1.1 vs. uniprot
Match: A0A5J5BPR8_9ASTE (MSP domain-containing protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5BPR8_9ASTE)

HSP 1 Score: 48.1 bits (113), Expect = 8.870e-5
Identity = 21/46 (45.65%), Postives = 27/46 (58.70%), Query Frame = 0 
Query:    5 IKGHKDVVRFLMGRGCDTEACDSNSWTPLTCGAVGGHAAVIRQLLT 50
            I+GH DV+RFL+  G D +  D N WTPL C +  G    +  LLT
Sbjct:  266 IRGHVDVLRFLVSMGGDPDVADCNGWTPLHCASAEGQGEAVEFLLT 311
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6629.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A5J5BPR8_9ASTE8.870e-545.65MSP domain-containing protein n=1 Tax=Nyssa sinens... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 3..55
e-value: 3.8E-10
score: 41.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 6..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6629contigP-wetherbeei_contig6629:224..415 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6629.1.1mRNA_P-wetherbeei_contig6629.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6629 224..415 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6629.1.1 ID=prot_P-wetherbeei_contig6629.1.1|Name=mRNA_P-wetherbeei_contig6629.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=64bp
LLVRIKGHKDVVRFLMGRGCDTEACDSNSWTPLTCGAVGGHAAVIRQLLT
GRCAGGLAMLLECR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf