prot_P-wetherbeei_contig6596.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6596.1.1
Unique Nameprot_P-wetherbeei_contig6596.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length200
Homology
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BLAST of mRNA_P-wetherbeei_contig6596.1.1 vs. uniprot
Match: A0A7S2R9L1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R9L1_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 8.300e-6
Identity = 24/41 (58.54%), Postives = 32/41 (78.05%), Query Frame = 0 
Query:  110 DPRQNYTVNVGHAIEALRNDIPLIFEEAPTMDIFSPDIVLK 150
            D ++NYT+NVG AIE LR+D+PL+F  AP MDIF+  +VL 
Sbjct:  179 DLKRNYTLNVGKAIETLRDDVPLMFRSAPDMDIFADGVVLS 219
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BLAST of mRNA_P-wetherbeei_contig6596.1.1 vs. uniprot
Match: A0A836CA49_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA49_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 3.070e-5
Identity = 27/87 (31.03%), Postives = 49/87 (56.32%), Query Frame = 0 
Query:   80 DPTGFASNAAQLHQIEMVDLLERPSGPRM------PDPRQNYTVNVGHAIEALRNDIPLIFEEAPTMDIFSPDIVLKVQR----RGR 156
            D +   + A  ++++  V+L ER +             +Q +TV +GH I+ L+ ++P++FE  P++DIF+ D+VLK  +    RGR
Sbjct:   54 DESAHVAAAPAVNEVSRVELPERDTSTEDRLNQEDEKKKQEFTVALGHCIDTLQEELPVLFERRPSLDIFTSDVVLKDPKGTLSRGR 140
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6596.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7S2R9L1_9STRA8.300e-658.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836CA49_9STRA3.070e-531.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 7.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6596contigP-wetherbeei_contig6596:1421..2020 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6596.1.1mRNA_P-wetherbeei_contig6596.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6596 1343..2194 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6596.1.1 ID=prot_P-wetherbeei_contig6596.1.1|Name=mRNA_P-wetherbeei_contig6596.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=200bp
MMRRRPTLLLSALCGCFLSLVQPFTLGLAPSRRLARLHVAKGGSTPEGTP
TAAGTRRPAEAALNAAQAHSHMSFFGAGWDPTGFASNAAQLHQIEMVDLL
ERPSGPRMPDPRQNYTVNVGHAIEALRNDIPLIFEEAPTMDIFSPDIVLK
VQRRGRGWLVILFICLTATLLFSCFASVCGALFVASVVLPSKSRLSALN*
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