prot_P-wetherbeei_contig659.7.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig659.7.1
Unique Nameprot_P-wetherbeei_contig659.7.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length111
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig659.7.1 vs. uniprot
Match: UPI0015E23552 (ribonuclease inhibitor-like n=1 Tax=Morone saxatilis TaxID=34816 RepID=UPI0015E23552)

HSP 1 Score: 49.3 bits (116), Expect = 7.500e-5
Identity = 33/67 (49.25%), Postives = 41/67 (61.19%), Query Frame = 0 
Query:    1 TLRELDLSWNNISRGSANVLGAAVAS--AQLTILRLAHNKLGCEGCQRLAHALRRNEM-LRTLDLSF 64
            TLRELDLS+NN+      +L A + S   +L ILRL+   +  EGC  LA ALR N   LR LDLS+
Sbjct:   56 TLRELDLSYNNLKDSGVKLLSAGLKSPHCRLEILRLSGCMITEEGCTSLASALRFNPSHLRELDLSY 122
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig659.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0015E235527.500e-549.25ribonuclease inhibitor-like n=1 Tax=Morone saxatil... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 54..81
e-value: 5.8
score: 11.8
coord: 82..109
e-value: 0.7
score: 18.3
coord: 26..53
e-value: 1.3E-4
score: 31.4
NoneNo IPR availablePANTHERPTHR24114LEUCINE RICH REPEAT FAMILY PROTEINcoord: 2..107
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 1..108
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 1..111
e-value: 2.0E-26
score: 94.3
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 29..48
e-value: 0.17
score: 12.1
coord: 1..13
e-value: 0.021
score: 14.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig659contigP-wetherbeei_contig659:7315..7647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig659.7.1mRNA_P-wetherbeei_contig659.7.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig659 7315..7647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig659.7.1 ID=prot_P-wetherbeei_contig659.7.1|Name=mRNA_P-wetherbeei_contig659.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp
TLRELDLSWNNISRGSANVLGAAVASAQLTILRLAHNKLGCEGCQRLAHA
LRRNEMLRTLDLSFTGMSARAALVMASALRDNKTLSRLGASHNPLSRSGA
RALLQAVRQRA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt