prot_P-wetherbeei_contig6518.2.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6518.2.2
Unique Nameprot_P-wetherbeei_contig6518.2.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length515
Homology
BLAST of mRNA_P-wetherbeei_contig6518.2.2 vs. uniprot
Match: A0A6H5J7I8_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7I8_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 8.810e-45
Identity = 167/564 (29.61%), Postives = 235/564 (41.67%), Query Frame = 0
Query:    1 MSALISCLYGIGSNHVAKRHELAMNVLLPEQPVPDAEIAAGTSPRRRSAGIYLRLRDCSRDGINDIGGXXXXXXXXXXXXXXXXXGFGGRESRVDRDSPQLRLELWGRAHVGSEDGLMEALERIFALVDRTLQRFPGLLLDKLVACPMCLDKQR-DVRDWATFPLEVVETDRECYPSPFMLCTSECDLDSRAQRLLYAGRIAAVA-AAPGDAAALATRRLRLVEDCP----------------------------------QLFPAVCCVAVYDCRSRRMALQGTAAVVDGDRGRLLSMAHLFLRF-----------GRDGAVVPL---------FKPEDCVVLVGTFVDADTCEWRFAADVSWDPSA--AVVAYDAPWMPDFPVLLQLRKLFEPVDWRTVACVPFKNV-----AKVGFGPL--------------GLPSLKLGSSEGVG----------ILAP-------------------------VTLVAWPGKHLG---SSIFAAHGTVARRFEQHHILQLDLLNERGASGGPVLDQSGSVIGLLSQGQGRIGYVYGAS 449
            MSALIS  YG+G    A     ++ + +P +         GT+ RR  A ++L+L    R G ++                          + +   SP  RLEL  +A     +GLM  LE +   VD+TL  FPGLL ++ V CP C++K+  D   W   PLE+VE  R C P    +C  +C L    +RL++ G +      A G A +   RR   V   P                                   LFPAVC +A+YDC ++R     TA +V  ++G LLS AH FL+F           G +G   P             E+C+VLVGTF    T  W F A+         + + YD  W  D PVLL++++ F P+  + V  + FK+V     A+   G +              GL +LKLG S  V            + P                         +TLVA+P +H     SSI   HG VAR      ++++ L N  GASGGPV+D+ G V+G+LSQG     YV G S
Sbjct: 1707 MSALISRFYGMGKRGSASLSRRSIYIKVPIRGNSGGN--GGTTRRRGEAEVFLKLH---RGGQHN--------------------------ALLSMQSP--RLELLAQAESHRREGLMRGLEGLVKEVDKTLDEFPGLLFERRVPCPACMEKKPGDPAAWGGLPLEMVEDKRSC-PGDLPMCKYKCRLQDLQKRLMFVGELHPEGDEADGGALSYHHRRHGSVWVSPLPELGVPGVVDGAGARIGDRDGGPYRGFGVPRVETLFPAVCPIAIYDCVTQRTRAHATAFIVKSEKGYLLSAAHTFLKFKFEENDGGGEDGDEGRNAPRRGRWCYHDGVTHENCIVLVGTFQSPSTTRWEFVAEALQHSELVRSKLYYDIGWNKDHPVLLRIKRRFSPIPTKVVDHLVFKDVTRDWRARAPGGDVVNSTQDQRLRDHSWGLTALKLGDSRQVHNRPKGDVEYLTIYPEALLEVLKEEDNDVCMTMTVFPQELLTLVAFP-EHTAPYFSSISVTHGPVARNMVGQDVIEVLLSNHPGASGGPVVDKRGEVVGILSQGNQFGAYVMGIS 2235          
BLAST of mRNA_P-wetherbeei_contig6518.2.2 vs. uniprot
Match: D7FWK1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWK1_ECTSI)

HSP 1 Score: 176 bits (446), Expect = 1.760e-43
Identity = 168/573 (29.32%), Postives = 237/573 (41.36%), Query Frame = 0
Query:    1 MSALISCLYGIGSNHVAKRHELAMNVLLPEQPVPDAEIAAGTSPRRRSAGIYLRLRDCSRDGINDIGGXXXXXXXXXXXXXXXXXGFGGRESRVDRDSPQLRLELWGRAHVGSEDGLMEALERIFALVDRTLQRFPGLLLDKLVACPMCLDKQR-DVRDWATFPLEVVETDRECYPSPFMLCTSECDLDSRAQRLLYAGRIAAVAAAPGDAAALATRRLRL------------VEDCPQL--------------------------------FPAVCCVAVYDCRSRRMALQGTAAVVDGDRGRLLSMAHLFLRF-----------GRDGAVVPL---------FKPEDCVVLVGTFVDADTCEWRFAADVSWDPSA--AVVAYDAPWMPDFPVLLQLRKLFEPVDWRTVACVPFKNV-----AKVGFGPL--------------GLPSLKLGSSEGVG----------ILAP-------------------------VTLVAWPGKHLG---SSIFAAHGTVARRFEQHHILQLDLLNERGASGGPVLDQSGSVIGLLSQGQGRIGYVYGAS 449
            MSALIS  YG+G    A     ++ + +P          +GT+ RR  A ++L+L    R G ++                          + +   SP  RLEL  +A     + LM  LE +   VDRTL  FPGLL ++ V CP C++K+  D   W   PLE+VE  R C P    +C  +C L    +RL++ G +       GD A  + R   L            V   P+L                                +PAVC +A+YDC ++RM    TA +V  ++G LLS AH FL+F           G +G   P             E+C+VLVGTF    T +W F A+V        + + YD  W  D PVLL+++  F P+  + V  + FK V     A+   G +              GL +LKLG S  V            + P                         +TLVA+P +H+    SSI   HG VAR      ++++ L N  GASGGPV+D+ G V+G+LSQG     YV G S
Sbjct: 1677 MSALISRFYGMGKRGSASLSRRSIYIKVPIGGNSGGN--SGTTRRRGEAEVFLKLH---RGGQHN--------------------------ASLSMQSP--RLELLAQAESHRREELMRRLEGLVKEVDRTLGEFPGLLFERRVPCPACMEKKPGDPAAWGGLPLEMVEDKRSC-PGDLPMCKYKCRLQDLQKRLMFVGELHP----EGDEADGSIRNGTLSHHHHRRHGSVWVSPLPELGVPGVFDGLGAGIGERDGGPYRGFGVPRVESLYPAVCPIAIYDCVTQRMRAHATAFIVKSEKGYLLSAAHTFLKFKFEENDVGVEDGDEGRNAPRRGRWCYHNGVTHENCIVLVGTFQSPSTTQWEFVAEVLQHSELVRSKLYYDIGWNKDHPVLLRIKLRFSPIPTKVVDHLVFKEVTRDWRARAPGGDVVNSTQDQRLRHHSSGLTALKLGDSRKVHNRPKGDVEYLTIYPEALLEVLKEEDNDVCMTMTVFPQELLTLVAFP-EHIAPYFSSISVTHGPVARNMVGQDVIEVLLSNHPGASGGPVVDKRGEVVGILSQGNQFGAYVMGIS 2210          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6518.2.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5J7I8_9PHAE8.810e-4529.61Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FWK1_ECTSI1.760e-4329.32LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043504Peptidase S1, PA clan, chymotrypsin-like foldGENE3D2.40.10.10coord: 364..454
e-value: 1.0E-6
score: 30.6
NoneNo IPR availablePFAMPF13365Trypsin_2coord: 248..434
e-value: 1.3E-6
score: 29.4
IPR009003Peptidase S1, PA clanSUPERFAMILY50494Trypsin-like serine proteasescoord: 226..441

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6518contigP-wetherbeei_contig6518:603..3092 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6518.2.2mRNA_P-wetherbeei_contig6518.2.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6518 410..3186 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6518.2.2 ID=prot_P-wetherbeei_contig6518.2.2|Name=mRNA_P-wetherbeei_contig6518.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=515bp
MSALISCLYGIGSNHVAKRHELAMNVLLPEQPVPDAEIAAGTSPRRRSAG
IYLRLRDCSRDGINDIGGGGGGSCAGSYDGGGSSGGFGGRESRVDRDSPQ
LRLELWGRAHVGSEDGLMEALERIFALVDRTLQRFPGLLLDKLVACPMCL
DKQRDVRDWATFPLEVVETDRECYPSPFMLCTSECDLDSRAQRLLYAGRI
AAVAAAPGDAAALATRRLRLVEDCPQLFPAVCCVAVYDCRSRRMALQGTA
AVVDGDRGRLLSMAHLFLRFGRDGAVVPLFKPEDCVVLVGTFVDADTCEW
RFAADVSWDPSAAVVAYDAPWMPDFPVLLQLRKLFEPVDWRTVACVPFKN
VAKVGFGPLGLPSLKLGSSEGVGILAPVTLVAWPGKHLGSSIFAAHGTVA
RRFEQHHILQLDLLNERGASGGPVLDQSGSVIGLLSQGQGRIGYVYGASG
PAVSSLLADCDDDDGDGGFDGEDIDGCGEDIDGVEDGSGCGGGGKRRRSC
LIRVYDTAAIDGGG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043504Peptidase_S1_PA_chymotrypsin
IPR009003Peptidase_S1_PA