prot_P-wetherbeei_contig6517.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6517.1.2
Unique Nameprot_P-wetherbeei_contig6517.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length535
Homology
BLAST of mRNA_P-wetherbeei_contig6517.1.2 vs. uniprot
Match: A0A6H5JRH3_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH3_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.230e-49
Identity = 165/490 (33.67%), Postives = 225/490 (45.92%), Query Frame = 0
Query:    1 MVVDSTGYIVAKGARALRGLTLWGKIQNLFSDEPLAPHAEGWRVSAAAASYESKNKGXXXXXXXXXXXXXXXXXXXXXXXXXXAAEGFICPECRRGFPSAEDLLGHHAAAHR----DDDVNSDGXXXXDGGRGDGDGRTQXXXXXXXXXXXXQAVAGGQADGSGDGGPTRRSSWAHGRAELLENAAASRANSSGGGGTSGSFSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQSRLQEQRAVLRAQSEYVDALLPAVTELHGLGVGIGHAIDGQAELAERLAAKTDAVGDKTAFVTRQASRLNRGARKAKAAHERDVALQEVSTGLFLTVAGEEAALVARRPSNVCRWRAHRRQTAGGIWGFQSAVSGLWLGQGPFGGLKVRGKAFKNWEEVQCDLNASTTRLIVCSADWGKGGYV---------------------CRGAARGDDGGGGVA----LTVADAGIKAKERAAVFRVVDFEGYADSPF 461
            MV+DST Y + + AR LRG+T WGKI+N FS++P  P        A  A+    N                             AEGFICP+CR  FP+++ L+ HH  AH     DDD ++ G        G G G TQ  XXXXXX             G   GGP      +    + L           G  G SG  +G     XXXX                          + EQ+AV+ +Q  Y+D++  AV EL  LG  IG ++DGQ    +R+A K+    D+TAFVTR+A+R  + ++         +ALQEV+TGL+L V GEE  L  R   NVCR+ A  RQ   GI G +S+V+  WLGQ   G L+V G +F    E Q DL    T ++ CSA+WG GGY+                       G ++ ++G    A    L++ DA +  + RAAVFR+V+ +GY   PF
Sbjct:  125 MVLDSTRYAIERSARVLRGMTFWGKIRNAFSNDPEVPQQPAGNTRAGTATGNGGN---------------------GNYDPDVPAEGFICPDCRGLFPTSDALVAHHGLAHTIASADDDEDARGW-------GAGGGATQYGXXXXXX----------DVSGGSHGGPIPEPGSSTSLKDQLFG---------GREGWSGQRAGGAERKXXXXGV------------------------IAEQKAVMASQDAYLDSVGQAVKELGLLGRNIGESLDGQGATLDRVAEKSSEANDRTAFVTRKAARQAQSSKPNNPTFVMSLALQEVTTGLYLAVTGEEVVLQGRELRNVCRFEAWERQH--GIMGLKSSVTRKWLGQTFLGYLRVSGSSFGKNHEWQADLRGKETTMVCCSANWGAGGYLSSRPNGTSIRMGDTTLEGSTAASGGSKTNNGRDSAAEMAELSLVDATLANRPRAAVFRLVNCDGYTPQPF 541          
BLAST of mRNA_P-wetherbeei_contig6517.1.2 vs. uniprot
Match: A0A835YH57_9STRA (C2H2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH57_9STRA)

HSP 1 Score: 147 bits (371), Expect = 4.000e-35
Identity = 146/504 (28.97%), Postives = 202/504 (40.08%), Query Frame = 0
Query:    1 MVVDSTGYIVAKGARALRGLTLWGKIQNLFSDEPLAPHAEGWRVSAAAASYESKNKGXXXXXXXXXXXXXXXXXXXXXXXXXXAAEGFICPECRRGFPSAEDLLGHHAAAHRDDDVNSDGXXXXDGGRGDGDGRTQXXXXXXXXXXXXQAVAGGQADGS--GDGGPTRRSSWAHGRAELLENAAASRANSSGGGGTSGSFSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRQSRLQEQRAVLRAQSE--------------------------YVDALLPAVT-ELHGLGVGIGHAIDGQAELAERLAAKTDAVGDKTAFVTRQASRLNRGARKAKAAHERDVALQEVSTGLFLTVAGEEAALVARRPSNVCRWRAHRRQTAGGIWGFQSAVSGLWLGQGPFGGLKVRGKAFKNWEEVQCDLNA-----STTRLIVCSADWGKGGYVCRGAARGDDGGGGVALTVADAGIKAKERAAVFRVVDF--EGYADSPFPTAPLVQ 468
            MVVDST Y++ K AR +RG+T+WG++QN FSDEP    A    +S + +S                                   EG+ICPECR    SA+DLL H A+ H     N+           +G  R +                 G+AD    G G   +RSS          N A +R NS G G                                            QEQR ++R+Q                            Y+D L   V  +L  +   +G ++  Q    + L    D   D+   VTRQA+++ R     K      VAL   ++G +L   G E  L  R+  NVC W  H   T+GGI GF+S VSGLWLG G  GG++     FK+WE+ QCD  A      + RLI C+  WGKG YV +  A G        L++A    + K  AAVF++V    + +  SP+ +AP +Q
Sbjct:   60 MVVDSTQYLLDKSARVIRGMTMWGRMQNFFSDEPAPVLAASTPISNSTSS-------------------------------SAGMEGYICPECRMRCASADDLLAHFASLHEALHGNAHAEEPATISSREGAARNELF---------------GEADKGRPGQGAWEQRSSTG-----CSANGADNRRNSGGSG----------------------------------------SGLAQEQRNIMRSQQAMFVTSITLILTSAIAFICGGPPPEQAYIDTLSSTVLPQLQHVTQSLGTSLAEQEHTLDYLHDGADKASDRALAVTRQAAKMTR----LKPTASGTVALLHCTSGAYLAAVGSEVTLKQRQIRNVCLWERH--STSGGICGFKSGVSGLWLGVGMLGGIQCSAATFKSWEQWQCDALAPGDPDESVRLICCAGGWGKGSYV-KVDAEGQ-------LSLAKCCPENKAEAAVFKLVSIREDQFRASPYVSAPRLQ 458          
BLAST of mRNA_P-wetherbeei_contig6517.1.2 vs. uniprot
Match: A0A024FYP5_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FYP5_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 3.920e-15
Identity = 59/170 (34.71%), Postives = 90/170 (52.94%), Query Frame = 0
Query:  249 YVDALLPAVTELHGLGVGIGHAIDGQAELAERLAAKTDAVGDKTAFVTRQASRLNRGARKAKAAHERDVALQEVSTGLFLTVAGEEAALVARRPSNVCRWRAHRRQTAGGIWGFQSAVSGLWLGQGPFGGLKVRGKAFKNWEEVQCDLNASTTRLIVCSADWGKGGYVCR 418
            Y+ AL P++ EL    + +G+A+D Q +  +R+  K D   D    V  Q+ RL  G++     +    ALQE+ST  FL   G E  L A   S+ C +RA    +   +WGFQS +SG +LG   FG LKV+    K++E+   +L+ STT L   ++    GG++ R
Sbjct:  214 YLSALAPSLEELKHASLAMGYALDTQNKQLDRIDDKVDRTNDDMRIVALQSKRLL-GSKTDHPIYSFRCALQELSTKAFLQDVGGEPLLSADVISDGCTFRAFSVDSEINVWGFQSELSGAFLGVNRFGYLKVKALELKSYEQFIMNLDQSTTTLFCTASYMWTGGWIFR 382          
BLAST of mRNA_P-wetherbeei_contig6517.1.2 vs. uniprot
Match: F0W8Z8_9STRA (Uncharacterized protein AlNc14C37G3268 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8Z8_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.490e-14
Identity = 56/170 (32.94%), Postives = 86/170 (50.59%), Query Frame = 0
Query:  249 YVDALLPAVTELHGLGVGIGHAIDGQAELAERLAAKTDAVGDKTAFVTRQASRLNRGARKAKAAHERDVALQEVSTGLFLTVAGEEAALVARRPSNVCRWRAHRRQTAGGIWGFQSAVSGLWLGQGPFGGLKVRGKAFKNWEEVQCDLNASTTRLIVCSADWGKGGYVCR 418
            Y+ AL P++ EL    + +G+A+D Q +  +R+  K D   D+   V  Q+ RL  G +     +    ALQE ST  F+     E  L A   S  C +RA    T   +WGFQS +SG +LG   FG LK++    K++E+   +L+  TT L   ++    GG++ R
Sbjct:  162 YLSALEPSLKELKQASLAMGYALDTQNKQLDRIDDKVDRANDEMRIVALQSKRLL-GPKSGHPMYSFRCALQEFSTKSFMKDVRGEPLLSANVISEGCTYRAFSVDTENNVWGFQSELSGAFLGVNRFGYLKIKAPELKSYEQFIVNLDQPTTTLFCTASYMWTGGWISR 330          
BLAST of mRNA_P-wetherbeei_contig6517.1.2 vs. uniprot
Match: D8LT98_ECTSI (Conserved C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT98_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 5.430e-7
Identity = 44/129 (34.11%), Postives = 61/129 (47.29%), Query Frame = 0
Query:  358 GIWGFQSAVSGLWLGQGPFGGLKVRGKAFKNWEEVQCDLNASTTRLIVCSADWGKGGYVC------------------RGAARGDDGGGG-------VALTVADAGIKAKERAAVFRVVDFEGYADSPF 461
            GI G +S V+  WLGQ   G L+V G +F    E Q DL    T ++ CSA+WG GGY+                     A+ G+    G         L++ DA +  + RAAVFR+V+ +GY   PF
Sbjct:  343 GIIGLKSGVTRKWLGQTFLGYLRVSGSSFGKNHEWQADLRRKETTMVCCSANWGAGGYLSVRPSGTSIRNGDTTLEGPTAASGGNTNNCGRDSAAEMAELSLVDATLANRPRAAVFRLVNCDGYTPQPF 471          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6517.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JRH3_9PHAE2.230e-4933.67t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835YH57_9STRA4.000e-3528.97C2H2-type domain-containing protein n=1 Tax=Tribon... [more]
A0A024FYP5_9STRA3.920e-1534.71Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0W8Z8_9STRA1.490e-1432.94Uncharacterized protein AlNc14C37G3268 n=1 Tax=Alb... [more]
D8LT98_ECTSI5.430e-734.11Conserved C2H2 zinc finger protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 182..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..240
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 482..534
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 234..302
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 90..111
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 88..116
score: 9.618734
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 240..302
score: 10.285394

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6517contigP-wetherbeei_contig6517:10..2468 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6517.1.2mRNA_P-wetherbeei_contig6517.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6517 3..2683 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6517.1.2 ID=prot_P-wetherbeei_contig6517.1.2|Name=mRNA_P-wetherbeei_contig6517.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=535bp
MVVDSTGYIVAKGARALRGLTLWGKIQNLFSDEPLAPHAEGWRVSAAAAS
YESKNKGNGRNGDGGGGGDGGNAGPSSADSAPSAAEGFICPECRRGFPSA
EDLLGHHAAAHRDDDVNSDGGGGGDGGRGDGDGRTQGFGGSSAGSGDGQA
VAGGQADGSGDGGPTRRSSWAHGRAELLENAAASRANSSGGGGTSGSFSG
SRGGGGSSSGGFGSGGGGSGSSGGGSSGGGQRQSRLQEQRAVLRAQSEYV
DALLPAVTELHGLGVGIGHAIDGQAELAERLAAKTDAVGDKTAFVTRQAS
RLNRGARKAKAAHERDVALQEVSTGLFLTVAGEEAALVARRPSNVCRWRA
HRRQTAGGIWGFQSAVSGLWLGQGPFGGLKVRGKAFKNWEEVQCDLNAST
TRLIVCSADWGKGGYVCRGAARGDDGGGGVALTVADAGIKAKERAAVFRV
VDFEGYADSPFPTAPLVQRDAVPAATAAAGAGAGAARGPRLPPASGGGGD
SGRGGGGGGASGYGGGGVQRRESDDAERGGSSLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR000727T_SNARE_dom