prot_P-wetherbeei_contig6340.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6340.1.1
Unique Nameprot_P-wetherbeei_contig6340.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length173
Homology
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BLAST of mRNA_P-wetherbeei_contig6340.1.1 vs. uniprot
Match: A0A835YJG6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJG6_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.830e-9
Identity = 35/63 (55.56%), Postives = 41/63 (65.08%), Query Frame = 0 
Query:   98 FVLLAFDVMIDVGGRPFVLEVNHNPAVP------GPQACTPAFYSHLVGLASDIV---ALVIG 151
            F LLAFDVM+D   RP++LEVNHNPAVP      G   C  AF+ HLVGL  DI+   AL +G
Sbjct:  579 FALLAFDVMLDSARRPWLLEVNHNPAVPSREVLAGEGECGDAFWEHLVGLCQDIIEVTALEVG 641
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6340.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YJG6_9STRA3.830e-955.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.470.20coord: 55..157
e-value: 4.0E-6
score: 28.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6340contigP-wetherbeei_contig6340:128..646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6340.1.1mRNA_P-wetherbeei_contig6340.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6340 36..704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6340.1.1 ID=prot_P-wetherbeei_contig6340.1.1|Name=mRNA_P-wetherbeei_contig6340.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=173bp
MAVANTTAAAMAATDSLRLTEAAFSARKQALSVVGTVSPLPLPSARLPLT
LAPEESASATENVYYGATAAAAAMVDHIKAPNGPRSGCCIDDGEWEEFVL
LAFDVMIDVGGRPFVLEVNHNPAVPGPQACTPAFYSHLVGLASDIVALVI
GRDRGETVGTWIPVDEERKDSG*
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