prot_P-wetherbeei_contig6253.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6253.1.1
Unique Nameprot_P-wetherbeei_contig6253.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length271
Homology
BLAST of mRNA_P-wetherbeei_contig6253.1.1 vs. uniprot
Match: A0A835ZF85_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF85_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.890e-51
Identity = 143/282 (50.71%), Postives = 173/282 (61.35%), Query Frame = 0
Query:    1 ALGILAQRACVTAETLPALREHLEAV-ADSGDEGPGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRLSGAALVMLKSLITVVGYMLAEDIRNAADYRMVVLR--DRQGGFGDDDGXXXXXXXXXXXGA--------------GELVTSLCLWCLNSGVCFREIGADAWSVVLTSGTLSPLDSLAVGLGLDFPVRLEAGHVINVPQQCLVASVGRAGGVSLSAKFSDQNGFAYQDALGAALMEYAEVVPGGVLVFFPSYGLMHKMARRWESTGLLDRLQ 265
            ALGIL  RA +TAE+   L   L+ + A+   +  G                  XXXXXXXXXX   Q +LS  AL ++  +IT   +ML ++  NAA Y+M V+R  DR GG G    XXXXXXXXXXX                G +V   CLWCL++ VCF EI   A SVVLTSGTLSP+DS A  LG+ FP++LEAGHVI+V QQC VASVG   GVSL A F +Q    YQDALGAAL+ YA VV GGVLVFFPSYGL+ ++  RWE TGLL ++Q
Sbjct:  533 ALGILGHRAGITAESAEQLESALQLISAEQEQDAAGD---------------MAXXXXXXXXXXDAQQSKLSAPALNVVSGVITAARFMLGKESTNAAHYKMAVIRERDRSGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRMVMYWCLWCLSASVCFEEIAEQARSVVLTSGTLSPMDSFASELGVPFPIQLEAGHVIDVRQQCFVASVGACNGVSLKATFGNQGLAEYQDALGAALLNYARVVRGGVLVFFPSYGLLARVRERWELTGLLAQMQ 799          
BLAST of mRNA_P-wetherbeei_contig6253.1.1 vs. uniprot
Match: D7FLD2_ECTSI (DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD2_ECTSI)

HSP 1 Score: 188 bits (477), Expect = 1.420e-50
Identity = 117/271 (43.17%), Postives = 158/271 (58.30%), Query Frame = 0
Query:    1 ALGILAQRACVTAETLPALREHLEAVA-DSGDEGPGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRLSGAALVMLKSLITVVGYMLAEDIRNAADYRMVVLRDRQGGFGDDDGXXXXXXXXXXXGAGELV---TSLCLWCLNSGVCFREIGADAWSVVLTSGTLSPLDSLAVGLGLDFPVRLEAGHVINVPQQCLVASVGRAGGVSLSAKFSDQNGFAYQDALGAALMEYAEVVPGGVLVFFPSYGLMHKMARRWESTGLLDRLQQV 267
            ALG++  RA VT+E+L  L+E L+ V  + G+  P                                 + LS  ++ +  SL+ V+G++L E + N   Y+MVVLR+R G +  +             G+G +    T LC WC ++  CF EI     SVVLTSGTLSP++S A  LG++FP RLEA HVINV +QCLV SVG  G VSL A++++Q+   YQDALG AL+++A VVPGG+LVFFPSYGLM KM  RWE TGLL  LQ++
Sbjct:  461 ALGLMQSRAGVTSESLVYLKEALKMVINEDGNADP---------------YARDQADGASFDHRLGGDEVLSSGSVHVTASLVKVLGFLLTEGMENVDHYKMVVLRER-GPW--EPVSSRGRRGRNRPGSGSITAMETYLCFWCQSASTCFSEIDKQVHSVVLTSGTLSPMNSFAGELGIEFPHRLEANHVINVKKQCLVTSVGYFGKVSLDARYTNQHDLKYQDALGNALLQHARVVPGGILVFFPSYGLMDKMHDRWEVTGLLQALQEI 713          
BLAST of mRNA_P-wetherbeei_contig6253.1.1 vs. uniprot
Match: A0A6H5JGC9_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGC9_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 7.580e-49
Identity = 116/272 (42.65%), Postives = 158/272 (58.09%), Query Frame = 0
Query:    1 ALGILAQRACVTAETLPALREHLEAV-ADSGDEGPGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRLSGAALVMLKSLITVVGYMLAEDIRNAADYRMVVLRDRQGGFGDDDGXXXXXXXXXXXGAGELV---TSLCLWCLNSGVCFREIGADAWSVVLTSGTLSPLDSLAVGLGLDFPVRLEAGHVINVPQQCLVASVGRAGGVSLSAKFSDQNGFAYQDALGAALMEYAEVVPGGVLVFFPSYGLMHKMARRWES-TGLLDRLQQV 267
            ALG++  RA VT+E+L  L+E L+ V ++ G+  P                                 + LS  +  +  SL+ V+G++L E + N   Y+MVVLR+R G +  +             G+G +    T LC WC ++  CF EI     SVVLTSGTLSP++S A  LG++FP RLEA HVINV +QCLV SVG  G VSL A++++Q+   YQDALG AL+++A +VPGG+LVFFPSYGLM KM  RWE  TGLL  LQ++
Sbjct:  320 ALGLMQSRAGVTSESLVYLKEALKMVMSEDGNADP---------------YARDQVDGASFGHGHGGDEVLSSGSAHVTASLVKVLGFLLTEGMENVDHYKMVVLRER-GPW--EPVSSRGRRGRNRLGSGSITAMETYLCFWCQSASTCFSEIDKQVHSVVLTSGTLSPMNSFAGELGIEFPHRLEANHVINVKKQCLVTSVGYFGKVSLDARYTNQHDLKYQDALGNALLQHARIVPGGILVFFPSYGLMDKMHDRWEVVTGLLQALQEI 573          
BLAST of mRNA_P-wetherbeei_contig6253.1.1 vs. uniprot
Match: A0A2D4BU49_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BU49_PYTIN)

HSP 1 Score: 164 bits (415), Expect = 2.810e-42
Identity = 98/276 (35.51%), Postives = 147/276 (53.26%), Query Frame = 0
Query:    2 LGILAQRACVTAETLPALREHLEAVAD----------SGDEGPGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQRLSGAALVMLKSLITVVGYMLAEDIRNAADYRMVVLRDRQGGFGDDDGXXXXXXXXXXXGAGELVTSLCLWCLNSGVCFREIGADAWSVVLTSGTLSPLDSLAVGLGLDFPVRLEAGHVINVPQQCLVASVGRA-GGVSLSAKFSDQNGFAYQDALGAALMEYAEVVPGGVLVFFPSYGLMHKMARRWESTGLLDRLQQ 266
            + + A+   +T ET  A+RE L AV D           G+EG  +G                              QRL  AAL  ++S++ V GYM  +++R   D++++V++ R        G           G+ E    LC+WCLN+ V F ++     SV+LTSGTLSP+DS A  LG +FP+RLEA HV+++ +Q  + +V    GGV LS  + +Q  F +QD++G  L +YA+VVPGG+L+FFPSY LM K+  RW  TG+  R+++
Sbjct:  455 IAMFAEYTGMTHETYDAIREDLRAVVDYEKQLQQTTTEGEEGGEAGDDSGG-------------------------QRLPAAALTTIRSVLNVAGYMYRDNLRYLDDFKLIVMKKRS--HQRSSGSRSRGYNNMSSGSSEWEFKLCIWCLNAAVAFSDVVRQVRSVILTSGTLSPMDSFAGELGTEFPIRLEASHVVDMRRQVFIGAVMNGPGGVDLSCVYRNQQEFRFQDSMGELLHQYAQVVPGGLLMFFPSYMLMEKLETRWRQTGVWARIEE 703          
BLAST of mRNA_P-wetherbeei_contig6253.1.1 vs. uniprot
Match: A0A8K1C7G1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7G1_PYTOL)

HSP 1 Score: 159 bits (403), Expect = 1.140e-40
Identity = 84/211 (39.81%), Postives = 127/211 (60.19%), Query Frame = 0
Query:   69 RLSGAALVMLKSLITVVGYMLAEDIRNAADYRMVVLRDRQ-----------GGFGDDDGXXXXXXXXXXXGAGELVTSLCLWCLNSGVCFREIGADAWSVVLTSGTLSPLDSLAVGLGLDFPVRLEAGHVINVPQQCLVASVGRAGG-VSLSAKFSDQNGFAYQDALGAALMEYAEVVPGGVLVFFPSYGLMHKMARRWESTGLLDRLQQV 267
            RLS  AL  ++S+I V  YM  ++++   D++++VL+ RQ             F   DG                   +C+WCLN+ V F ++  +A SV+LTSGTLSP+DS A  LG DFP+RLEA HV+N+ +Q  + ++    G V LS+ + +Q  F YQD++G  L ++A+VVPGGVL+FFPSY LM K+  RW  TG+ ++++Q+
Sbjct:  516 RLSAMALGTIRSIINVADYMYRDELKYLDDFKLIVLKTRQKRRPTKSRYGANSFSPGDGDGWE-------------VKMCIWCLNAAVAFSDVVKEARSVILTSGTLSPMDSFAGELGTDFPIRLEANHVVNMRRQVFIGAIMNGPGRVDLSSTYKNQQEFRYQDSMGELLFKHAQVVPGGVLMFFPSYMLMEKLETRWRQTGVWNKIEQL 713          
BLAST of mRNA_P-wetherbeei_contig6253.1.1 vs. uniprot
Match: A0A662WP93_9STRA (Helicase ATP-binding domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WP93_9STRA)

HSP 1 Score: 159 bits (403), Expect = 1.150e-40
Identity = 83/196 (42.35%), Postives = 126/196 (64.29%), Query Frame = 0
Query:   70 LSGAALVMLKSLITVVGYMLAEDIRNAADYRMVVLRDRQGGFGDDDGXXXXXXXXXXXGAGELVTSLCLWCLNSGVCFREIGADAWSVVLTSGTLSPLDSLAVGLGLDFPVRLEAGHVINVPQQCLVASVGRAGG-VSLSAKFSDQNGFAYQDALGAALMEYAEVVPGGVLVFFPSYGLMHKMARRWESTGLLDRL 264
            L   AL  ++S++ VV YM  ++ +   D+++VV++ R    G   G           G  E    +CLWCLN+ V F +I + A SV+LTSGTLSP+DS A  LG +FP+RLEA HV+N+ +Q  + S+    G V LS+ + +Q  F YQD++G  L++Y++V+PGGVL+FFPSY L++K++ RW+ TGL D++
Sbjct:  529 LGSLALSTVESIMNVVDYMFRDESKYLDDFKLVVIKSRVPWRG---GGRFQSPNKSSNG-NEWQLKMCLWCLNAAVAFSDIVSQARSVILTSGTLSPMDSFAGELGTEFPIRLEANHVVNMRKQVFIGSIMNGPGYVDLSSTYKNQQEFKYQDSMGQLLLQYSQVIPGGVLMFFPSYSLLNKLSTRWKQTGLWDQM 720          
BLAST of mRNA_P-wetherbeei_contig6253.1.1 vs. uniprot
Match: A0A2P4X5E5_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X5E5_9STRA)

HSP 1 Score: 152 bits (385), Expect = 2.810e-38
Identity = 78/197 (39.59%), Postives = 124/197 (62.94%), Query Frame = 0
Query:   70 LSGAALVMLKSLITVVGYMLAEDIRNAADYRMVVLRDRQGGFGDDDGXXXXXXXXXXXGAGELVTSLCLWCLNSGVCFREIGADAWSVVLTSGTLSPLDSLAVGLGLDFPVRLEAGHVINVPQQCLV-ASVGRAGGVSLSAKFSDQNGFAYQDALGAALMEYAEVVPGGVLVFFPSYGLMHKMARRWESTGLLDRLQ 265
            L+  AL     LI+V  YM + + +NA D+++++ +  +    D+             G   + T LC+WCL++ V F E+  ++ SV+L SGTLSP+DS A  LG+DFP+RLEA HV+N+ +Q  + A +   GGV L + + +Q  F YQD++G  L++YA+V+PGG+L+FFPSY LM  +  RW+ TG+ ++L+
Sbjct:  504 LNNRALNTATRLISVATYMFSNNSKNADDFKLLITKKMR--LNDE-------------GEEVIDTKLCIWCLSAAVVFSEVARESHSVILASGTLSPMDSFAGELGVDFPIRLEANHVVNMRKQVFIGALMSGPGGVDLLSTYKNQQNFQYQDSIGLLLLQYAQVIPGGILMFFPSYALMGILKSRWKRTGVWNKLE 685          
BLAST of mRNA_P-wetherbeei_contig6253.1.1 vs. uniprot
Match: H3GHW5_PHYRM (Helicase ATP-binding domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GHW5_PHYRM)

HSP 1 Score: 152 bits (385), Expect = 2.940e-38
Identity = 76/198 (38.38%), Postives = 122/198 (61.62%), Query Frame = 0
Query:   70 LSGAALVMLKSLITVVGYMLAEDIRNAADYRMVVLRDRQGGFGDDDGXXXXXXXXXXXGAGELVTSLCLWCLNSGVCFREIGADAWSVVLTSGTLSPLDSLAVGLGLDFPVRLEAGHVINVPQQCLVASVGRA-GGVSLSAKFSDQNGFAYQDALGAALMEYAEVVPGGVLVFFPSYGLMHKMARRWESTGLLDRLQQ 266
            L   AL   +S++ VV YM  + ++   D+++VV++ +     +              G  E    +C+WCLN+ V F +I + A SV+LTSGTLSP++S A  LG+DFP+RLEA HV+N+ +Q  + +V    G V L + +++Q    YQD++G  L++Y++ VPGG+L+FFPSY L++K+  RW+ T L  +L+Q
Sbjct:  538 LGALALATAQSIVNVVDYMFRDALKYIDDFKLVVIKSKSTWREN----ASFRSPTKRNGGDEWELKMCIWCLNAAVAFSDIASQARSVILTSGTLSPMESFAGELGVDFPIRLEANHVVNMRKQVFIGAVMHGPGNVDLQSTYNNQQDIKYQDSVGQLLLQYSQAVPGGILMFFPSYSLLNKLTTRWKKTKLWSQLEQ 731          
BLAST of mRNA_P-wetherbeei_contig6253.1.1 vs. uniprot
Match: D0NS72_PHYIT (Helicase ATP-binding domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NS72_PHYIT)

HSP 1 Score: 151 bits (381), Expect = 3.160e-38
Identity = 79/197 (40.10%), Postives = 127/197 (64.47%), Query Frame = 0
Query:   70 LSGAALVMLKSLITVVGYMLAEDIRNAADYRMVVLRDRQGGFGDDDGXXXXXXXXXXXGAGELV-TSLCLWCLNSGVCFREIGADAWSVVLTSGTLSPLDSLAVGLGLDFPVRLEAGHVINVPQQCLV-ASVGRAGGVSLSAKFSDQNGFAYQDALGAALMEYAEVVPGGVLVFFPSYGLMHKMARRWESTGLLDRL 264
            LS +AL     LI+V  YM +++ +NA D+++++ +  +    +D+G              E++ T LC+WCL++ V F E+  ++ SV+L SGTLSP++S A  LG+DFP+RLEA HV+N+ +Q  V A +   GGV L + + +Q  F YQD++G  L++YA+++PGG+L+FFPSY L+  +  RWE TG+  +L
Sbjct:  378 LSNSALNTATRLISVATYMFSDNCKNADDFKLLITKKMRV---NDEGE-------------EIIDTKLCIWCLSAAVVFAEVARNSHSVILASGTLSPMNSFAGELGVDFPIRLEANHVVNMRKQVFVGALMNGPGGVDLLSTYKNQQNFQYQDSMGYLLLQYAQMIPGGILMFFPSYALLGILKARWERTGIWAKL 558          
BLAST of mRNA_P-wetherbeei_contig6253.1.1 vs. uniprot
Match: W2Q1Q3_PHYPN (DNA helicase n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2Q1Q3_PHYPN)

HSP 1 Score: 151 bits (382), Expect = 3.290e-38
Identity = 79/197 (40.10%), Postives = 124/197 (62.94%), Query Frame = 0
Query:   70 LSGAALVMLKSLITVVGYMLAEDIRNAADYRMVVLRDRQGGFGDDDGXXXXXXXXXXXGAGELVTSLCLWCLNSGVCFREIGADAWSVVLTSGTLSPLDSLAVGLGLDFPVRLEAGHVINVPQQCLV-ASVGRAGGVSLSAKFSDQNGFAYQDALGAALMEYAEVVPGGVLVFFPSYGLMHKMARRWESTGLLDRLQ 265
            LS +AL     LI+V  YM + + +NA D+++++ +  +    D+             G   + T LC+WCL++ V F E+  ++ SV+L SGTLSP+DS A  LG++FP+RLEA HV+N+ +Q  V A +   GGV L + + +Q  F YQD++G  L++YA+++PGG+L+FFPSY LM  +  RWE TG+  +L+
Sbjct:  259 LSNSALNTATRLISVATYMFSNNGKNADDFKLLITKKMR--LNDE-------------GEEVIDTKLCIWCLSAAVVFAEVARNSHSVILASGTLSPMDSFAGELGVEFPIRLEANHVVNMRKQVFVGALMNGPGGVDLLSTYKNQQNFQYQDSMGYLLLQYAQMIPGGILMFFPSYALMGILKARWERTGIWAKLE 440          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6253.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZF85_9STRA1.890e-5150.71Helicase C-terminal domain-containing protein n=1 ... [more]
D7FLD2_ECTSI1.420e-5043.17DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JGC9_9PHAE7.580e-4942.65Helicase ATP-binding domain-containing protein n=1... [more]
A0A2D4BU49_PYTIN2.810e-4235.51DNA helicase n=1 Tax=Pythium insidiosum TaxID=1147... [more]
A0A8K1C7G1_PYTOL1.140e-4039.81Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A662WP93_9STRA1.150e-4042.35Helicase ATP-binding domain-containing protein n=2... [more]
A0A2P4X5E5_9STRA2.810e-3839.59Helicase ATP-binding domain-containing protein n=1... [more]
H3GHW5_PHYRM2.940e-3838.38Helicase ATP-binding domain-containing protein n=1... [more]
D0NS72_PHYIT3.160e-3840.10Helicase ATP-binding domain-containing protein n=1... [more]
W2Q1Q3_PHYPN3.290e-3840.10DNA helicase n=1 Tax=Phytophthora parasitica (stra... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 227..269
e-value: 4.0E-7
score: 30.4
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 203..270
e-value: 6.9E-12
score: 47.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..65
NoneNo IPR availablePANTHERPTHR11472:SF47FANCONI ANEMIA GROUP J PROTEINcoord: 13..266
IPR045028Helicase superfamily 1/2, DinG/Rad3-likePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 13..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6253contigP-wetherbeei_contig6253:778..2173 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6253.1.1mRNA_P-wetherbeei_contig6253.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6253 778..2173 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6253.1.1 ID=prot_P-wetherbeei_contig6253.1.1|Name=mRNA_P-wetherbeei_contig6253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=271bp
ALGILAQRACVTAETLPALREHLEAVADSGDEGPGSGGGSGGGSAAAATS
GERLNQGGGGGGGGEGQQRLSGAALVMLKSLITVVGYMLAEDIRNAADYR
MVVLRDRQGGFGDDDGGGFSGGEFGGGGAGELVTSLCLWCLNSGVCFREI
GADAWSVVLTSGTLSPLDSLAVGLGLDFPVRLEAGHVINVPQQCLVASVG
RAGGVSLSAKFSDQNGFAYQDALGAALMEYAEVVPGGVLVFFPSYGLMHK
MARRWESTGLLDRLQQVTEQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006555ATP-dep_Helicase_C
IPR027417P-loop_NTPase
IPR045028DinG/Rad3-like