prot_P-wetherbeei_contig6232.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6232.1.1
Unique Nameprot_P-wetherbeei_contig6232.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length106
Homology
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BLAST of mRNA_P-wetherbeei_contig6232.1.1 vs. uniprot
Match: A0A4R2HJS2_9ACTN (3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Kribbella sp. VKM Ac-2572 TaxID=2512223 RepID=A0A4R2HJS2_9ACTN)

HSP 1 Score: 58.5 bits (140), Expect = 6.500e-8
Identity = 39/98 (39.80%), Postives = 50/98 (51.02%), Query Frame = 0 
Query:    1 AGKTAVVFGSTGNVGRSAVIAFLAAGAKVIAPVRDAGRVGPKVQPHVSEAAFANLVEIVADVSTDVGKADILAAT-DGGKLIDHVVSSFGPWWDLGPL 97
            AG+T V+ G TGN+G   V A +AAGA V+ P RDAGR+  +V     +     LV I  D  T  G   I   T D      HVV+S G W+   P+
Sbjct:   10 AGQTTVILGGTGNIGEGIVRAHIAAGATVVVPSRDAGRI--EVVRQALDGGADRLVGIEGDTQTFDGMTKIAEETVDRAGPPTHVVASIGGWYGGQPV 105
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BLAST of mRNA_P-wetherbeei_contig6232.1.1 vs. uniprot
Match: W5TVP3_9NOCA (Putative oxidoreductase, SDR family n=2 Tax=Nocardia nova TaxID=37330 RepID=W5TVP3_9NOCA)

HSP 1 Score: 50.4 bits (119), Expect = 5.270e-5
Identity = 38/90 (42.22%), Postives = 50/90 (55.56%), Query Frame = 0 
Query:    2 GKTAVVFGSTGNVGRSAVIAFLAAGAKVIAPVRDAGRVGPKVQPHVSEAAFANLVEIVADVSTDVGKADILAATD--GGKLIDHVVSSFG 89
            G+TA+V GST N+GRS  IAF AAGA VI   RD  R    V    +    A+ V    D S +  +A   AAT+  GG+ ID +V++ G
Sbjct:   18 GRTALVTGSTSNIGRSVAIAFAAAGAHVIVSGRDDTRGAAVVAEIRAAGGAADYVHADLDGSIEASRALATAATELLGGR-IDILVNNAG 106
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6232.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A4R2HJS2_9ACTN6.500e-839.803-oxoacyl-[acyl-carrier protein] reductase n=1 Tax... [more]
W5TVP3_9NOCA5.270e-542.22Putative oxidoreductase, SDR family n=2 Tax=Nocard... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.720coord: 1..102
e-value: 6.7E-9
score: 37.5
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 2..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6232contigP-wetherbeei_contig6232:86..403 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6232.1.1mRNA_P-wetherbeei_contig6232.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6232 86..403 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6232.1.1 ID=prot_P-wetherbeei_contig6232.1.1|Name=mRNA_P-wetherbeei_contig6232.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp
AGKTAVVFGSTGNVGRSAVIAFLAAGAKVIAPVRDAGRVGPKVQPHVSEA
AFANLVEIVADVSTDVGKADILAATDGGKLIDHVVSSFGPWWDLGPLSGI
GESVN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf