prot_P-wetherbeei_contig6228.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6228.1.2
Unique Nameprot_P-wetherbeei_contig6228.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length278
Homology
BLAST of mRNA_P-wetherbeei_contig6228.1.2 vs. uniprot
Match: A0A6H5L0A8_9PHAE (PAP_fibrillin domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0A8_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 4.320e-48
Identity = 107/234 (45.73%), Postives = 140/234 (59.83%), Query Frame = 0
Query:   44 ATAKIAKDGTVDLQRPEKVQSVFDELQKAAVSMYKDAVGTGTTKEAA--AVAAPVVDKAK-LEESLETLLKGSSFSPAAMPAAQKQQLVQAVASLEASYPAGAAPLADPALSGQWSLVYSSSGGIFKAMLGKKRSKLFRVVDPLQEVDAAACTVTNTCGLRLRFTPLTFAMSQIGSYVGKGGSAVEIDF---KRGRLARILAPFRKGSVSASLTYVSDTWRICRSQGCILAFRK 271
            A A+    GTV L RP++VQ VFD++QK AV  YK + G  +  + A     AP+ + AK LE  LE+LL  S+F P  +   +K QLV A+ ++E SYPAGA PLADPALSGQWS+VYSSS  +   ++    S  F+  D  Q VD  A +V N C  RLR TPL   +++ GSY       V ++    K+G L R+L   R G V A +TY+SD WRICR+ G  LAFRK
Sbjct:  217 AVAEEGSSGTVKLDRPKEVQGVFDDVQKKAVDFYKTSSGAMSKSQDAEGGAVAPMSEAAKTLETKLESLLSESNFKPRKLKKDKKSQLVDAIKAMEESYPAGANPLADPALSGQWSVVYSSSSRLLGRVIKGLFSGFFKTSDRRQVVDTGASSVLNACRARLRLTPLALRVAKKGSYRKTAERKVLVEMPPTKKGLLRRVLPSLRAGKVEAEVTYLSDKWRICRAGGVTLAFRK 450          
BLAST of mRNA_P-wetherbeei_contig6228.1.2 vs. uniprot
Match: A0A836CKA5_9STRA (PAP_fibrillin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKA5_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.660e-47
Identity = 128/307 (41.69%), Postives = 161/307 (52.44%), Query Frame = 0
Query:   11 VAKDIAEVEATAEAAVKELVAKAVAAAPVPAMPAT-AKIAKDGTVDLQRPEKVQSVFDELQKAAVSMYK---DAVGTGTTKE----AAAVAA--------------PVVDKAKLEESLETLLKGSSFSPAAMPAAQKQQL------------------VQAVASLEASYPAGAAPLADPALSGQWSLVYSSSGGIFKAMLGKKRSKLFRVVDPLQEVDAAACTVTNTCGLRLRFTPLTFAMSQIGSYV-----GKGGSAVEIDFKRGRLARILAPFRKGSVSASLTYVSDTWRICRSQGCILAFRKV 272
            VA  + E  AT  +  K + + AVA    P   AT AK      +DLQRP +VQ+V + LQK AV+MYK    A   G  ++    A AVAA              P   +A LE+ LE LLK S  SPA M    +  L                  V  + +LEAS P GA PL  P L+G W+LVYSSSG +FKA LGKKRS  F+V  P Q VDAAA TV N+  LRLR TPL     Q G++      G  G+   ++F RG   R    FR+G+ + ++TY+S  WRICRS G +LAFRKV
Sbjct:  171 VAAPVQEASATVGSEAKAVPSAAVATPAAPPAKATPAKQQSKAGLDLQRPAQVQNVIESLQKRAVAMYKGAAQAASAGFVRDEDVPAVAVAAXXXXVADAMPEIAPPRASEAMLEKRLEDLLKTSDMSPARMSEQDQAALTTLHKSTRLTTHLHATHQVTTLEALEASTPPGAHPLHSPLLTGDWALVYSSSGSVFKAALGKKRSAFFKVSSPTQSVDAAAGTVLNSALLRLRLTPLRLRARQAGTFTLDKGSGAPGATAIVNFARGGFGRFAKLFRRGTAAVTVTYLSTGWRICRSDGVVLAFRKV 477          
BLAST of mRNA_P-wetherbeei_contig6228.1.2 vs. uniprot
Match: D8LNG8_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNG8_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 2.810e-21
Identity = 63/124 (50.81%), Postives = 83/124 (66.94%), Query Frame = 0
Query:   52 GTVDLQRPEKVQSVFDELQKAAVSMYKDAVGTGTTKEAA--AVAAPVVDKAK-LEESLETLLKGSSFSPAAMPAAQKQQLVQAVASLEASYPAGAAPLADPALSGQWSLVYSSSG-GIFKAMLG 171
            GTV L RP++VQ VFD++QK AV  YK + G  +  + A    AAP+ + AK LE  LE+LL  S+F P  +   +K QLV A+ ++E SYPA A PLADPALSGQWS+VYSSS  G+ +  +G
Sbjct:  196 GTVKLDRPKEVQGVFDDIQKKAVEFYKTSSGAMSKSQDAEGGAAAPMSEAAKTLETKLESLLSESNFKPRKLKKDKKSQLVAAIKAMEESYPADANPLADPALSGQWSVVYSSSSRGLGRLRIG 319          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6228.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L0A8_9PHAE4.320e-4845.73PAP_fibrillin domain-containing protein n=1 Tax=Ec... [more]
A0A836CKA5_9STRA3.660e-4741.69PAP_fibrillin domain-containing protein n=1 Tax=Tr... [more]
D8LNG8_ECTSI2.810e-2150.81Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 8..28
IPR006843Plastid lipid-associated protein/fibrillin conserved domainPFAMPF04755PAP_fibrillincoord: 101..254
e-value: 1.4E-10
score: 41.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6228contigP-wetherbeei_contig6228:181..2587 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6228.1.2mRNA_P-wetherbeei_contig6228.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6228 179..3518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6228.1.2 ID=prot_P-wetherbeei_contig6228.1.2|Name=mRNA_P-wetherbeei_contig6228.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=278bp
MASVAAVIEEVAKDIAEVEATAEAAVKELVAKAVAAAPVPAMPATAKIAK
DGTVDLQRPEKVQSVFDELQKAAVSMYKDAVGTGTTKEAAAVAAPVVDKA
KLEESLETLLKGSSFSPAAMPAAQKQQLVQAVASLEASYPAGAAPLADPA
LSGQWSLVYSSSGGIFKAMLGKKRSKLFRVVDPLQEVDAAACTVTNTCGL
RLRFTPLTFAMSQIGSYVGKGGSAVEIDFKRGRLARILAPFRKGSVSASL
TYVSDTWRICRSQGCILAFRKVTATEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006843PAP/fibrillin_dom