prot_P-wetherbeei_contig6211.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6211.1.1
Unique Nameprot_P-wetherbeei_contig6211.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length498
Homology
BLAST of mRNA_P-wetherbeei_contig6211.1.1 vs. uniprot
Match: A0A835YKZ9_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKZ9_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.190e-27
Identity = 201/493 (40.77%), Postives = 235/493 (47.67%), Query Frame = 0
Query:    7 AAIERAGGLRNLGNTCYMNAAVQALLALTRYVDDMQCEHWIQAVLAGEAEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXSASLYLALLQLSLAARGGPGGAAPDPALLKLAVDRHTDRFVGNRQQDAHEFLTELVSTLDEELEPFVPAVERRIVVAAAVTNVDAAARADATTDSAAANGAXXXXXXXXXXXAAWVVVATPTACAPDGAAAATGFAADAPAIYLSQKRYDGDAVLPAAVLETPGIAARDEATAGAAVSGAGWAGDGTLALVTPAEPRVRPGPASGGGAXXXXXXXXGYSLAKTEDEEADEAANAKKAAEEEAVEATARLRRELLPTARAFHAEVDVTLTCACCGYSRIRTEFYRDFSLDVDDAAAGGSVAGGTAALATSGAPLFGESGVSSATAAASAVPLQRLLTSFFRPRELSLRCERCRSERVR-AEYSFGALPRVLVLHVKRFR 498
            AA  R+ G RNLGNTCY+NA +QALL L  +VDD+Q   W +A+LA E  AP          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXX          A+LY ALLQL+L A GG  G    P  LK A+D H+DRF GN QQDAHEF  +L++ L EE+EP+ PAV +                                            ++  P    P         A + PA  L++  +  D + P        +    +  A AA S  G A     AL                  XXXXXXXX                          + AT      LLP+ARAFHAEVD++L C  CGY+R R E Y DFSLDV     GG   GG+             S           VPL RLL  FF  R+L L CERC       A Y  GALP VLVLH+KRFR
Sbjct:  325 AAAPRSEGFRNLGNTCYLNATLQALLGLKEFVDDLQASVWARAILAREG-APAQCAAGSSSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKQPG-----DAALYRALLQLALVAHGGRHGVLT-PHRLKAAMDAHSDRFAGNLQQDAHEFFGDLINALQEEMEPYAPAVAQ--------------------------------------------LLGLPKP--PPXXXXXXPAALETPA--LARHAHTDDGITP--------VRKGFDVAASAAASDRGEA-----ALSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAAT------LLPSARAFHAEVDMSLRCRGCGYTRRRPEPYMDFSLDV----VGG---GGSXXXXXXXXXXXXXS-----------VPLSRLLARFFARRKLELSCERCDDGGTAIAHYVMGALPGVLVLHIKRFR 725          
BLAST of mRNA_P-wetherbeei_contig6211.1.1 vs. uniprot
Match: D7G2P5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2P5_ECTSI)

HSP 1 Score: 115 bits (288), Expect = 2.070e-23
Identity = 167/556 (30.04%), Postives = 209/556 (37.59%), Query Frame = 0
Query:    1 RHTNDHAAIERAGGLRNLGNTCYMNAAVQALLALTRYVDDMQCEHWIQAVLAGEAEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXSASLYLALLQLSLAARGGPGGAAPDPALLKLAVDRHTDRFVGNRQQDAHEFLTELVSTLDEELEPFVPAVERRIVVAAAVTNVDAAARADATTDSAAANGAXXXXXXXXXXXAAWVVVATPTACAPDGAAAATGFAADAPAIYLSQKRYDGDAVLPAAVLETPGIAARDEATAGAAVSGAGWAGDGTLALVTPAEPRVRPGPA-------------------------------------SGGGAXXXXXXXXGY-----------------SLAKTEDEEADEAANAKKAAEEEAVEATARLRRELLPTARAFHAEVDVTLTCACCGYSRIRTEFYRDFSLDVDDAAA----GGSVAGGTAALATSGAPLFGESGVSSATAAASAVPLQRLLTSFFRPRELSLRCERCRSERVRAEYSFGALPRVLVLHVKRFR 498
            R+      + R  G RN+GNTCY+NA +Q LL+L+ +V D++ + W+ A+L     A                                        X XXXXXXXXX                LY ALL+LSL ARG  G    D + LK A+DRH+DRF GN QQDAHEFL +LV+ L EE +P       R+ +AA       AA       +AA +G             A     T             GF +                V    +++     + DE      V G GW      A                                                   S G     XXXXX                   +  +T  E  DE     +   E+  E   R +  L+PT R FHAEV+ TLTC  C YSR R E YRDFSLDV + A                         + GVS          L  LL SFF+P ELSLRCERC  +RVRAE+S   LP  LVLHVKRF+
Sbjct:  245 RYMTHREPLSRREGFRNMGNTCYLNACLQGLLSLSGFVGDLRRKCWVLAMLKPPPPAATGGVDGDRVDVAGGGDGGGDDAIDIRDSPHPRAVAVNDDXXXXXXXXXXXPLPPI-----------LYEALLRLSLEARGSHG--LMDASPLKRAMDRHSDRFAGNLQQDAHEFLGDLVNVLHEETQP-------RLDIAAGYVGKPLAA-------AAAVSGGGDKGKKVEVAVGAERSGRTRKTXXXXXXXXDGGFGSXXXXXXXXXXXXXXXXVT---MVDLSSTDSGDEGREEPDVYGGGWDDGEDFAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFEVFDLDSDGSCSDDXXXXXXXXXXXXXXXXXXXXXXXXARGETRTEGGDEDGEGPEGGRED--EEALRQKERLMPTTRHFHAEVEATLTCTKCSYSRRRRELYRDFSLDVPEPARRXXXXXXXXXXXXXXXXXXXXXXXDGGVSG---------LGDLLDSFFQPSELSLRCERCGHDRVRAEHSLAELPGALVLHVKRFK 759          
BLAST of mRNA_P-wetherbeei_contig6211.1.1 vs. uniprot
Match: A0A6H5KUE2_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUE2_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.960e-20
Identity = 164/562 (29.18%), Postives = 213/562 (37.90%), Query Frame = 0
Query:    1 RHTNDHAAIERAGGLRNLGNTCYMNAAVQALLALTRYVDDMQCEHWIQAVLAGEAEAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKXXXXXXXXXXXXXXXXXXXXXXSASLYLALLQLSLAARGGPGGAAPDPALLKLAVDRHTDRFVGNRQQDAHEFLTELVSTLDEELEPFVPAVERRIVVAAAVTNVDAAARAD--------------------------------------------------------------ATTDSAAANGAXXXXXXXXXXXAAWVVVATPTACAPDGAAAATGFAADAPAIYLSQKRYDGDAVLPAAVLETPGIAARDEATAGAAVSGAGWAGDGTLALVTPAEPRVRPGPASGGGAXXXXXXXXGYSLAKTEDEEADEAANAKKAAEEEAVEATARLRRELLPTARAFHAEVDVTLTCACCGYSRIRTEFYRDFSLDVDDAAA--GGSVAGGTAALATSGAPLFGESGVSSATAAASAVPLQRLLTSFFRPRELSLRCERCRSERVRAEYSFGALPRVLVLHVKRFR 498
            R+      + R  G RN+GNTCY+NA +Q LL+L+ +V D++ + W+ A+L     A                                          XXXXXXXXXXXXX            LY ALL+LSL ARG  G    D + LK A+DRH+DRF GN QQDAHEFL +LV+ L EE +P       R+ +AA       AA A                                                                  D ++ +             + W       A A                            V+    L++ G  + D            +    T A  +P               XXXXXX  G       DE+ +     ++  +EEA+    R +  L+PT R FHAEV+ TLTC  C YSR R E YRDFSLDV + A                       + GVS          L  LL +FF+P ELSLRCERC  +RVRAE+S   LP  LVLH+KRF+
Sbjct:  350 RYMTHREPLSRREGFRNMGNTCYLNACLQGLLSLSDFVGDLRRKCWVLAMLKPPPPAATGGIDGDRVDVAGDGNGGGDHAIDIRDSPHRRAVAVNGDDXXXXXXXXXXXXXXI-----------LYEALLRLSLEARGSHG--LMDASPLKRAMDRHSDRFAGNLQQDAHEFLGDLVNALHEETQP-------RLDIAAGYVGKPLAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTMVDLSSTDSGDEGREEPDVYGSGWDDGEDFAAAAEXXXXXXXXXXXXXXXXXXXXXXXXXGGVVEVLDLDSDGSYSDD------------YRNGATAAASSPPTXXXXXXXXXXXXXXXXXXXEGG-------DEDGEXXXXGRE--DEEAL----RQKERLMPTTRHFHAEVEATLTCTKCSYSRRRRELYRDFSLDVPEPARRXXXXXXXXXXXXXXXXXXXXXDGGVSE---------LGDLLDNFFQPSELSLRCERCGHDRVRAEHSLAELPGALVLHIKRFK 857          
BLAST of mRNA_P-wetherbeei_contig6211.1.1 vs. uniprot
Match: A0A433Q0X4_9FUNG (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433Q0X4_9FUNG)

HSP 1 Score: 65.9 bits (159), Expect = 1.120e-7
Identity = 42/119 (35.29%), Postives = 56/119 (47.06%), Query Frame = 0
Query:  379 RAFHAEVDVTLTCACCGYSRIRTEFYRDFSLDVDDAAAGGSVAGGTAALATSGAPLFGESGVSSATAAASAVPLQRLLTSFFRPRELSLRCERCRSERVRAEYSFGALPRVLVLHVKRF 497
            R F  EVD T+ C+ CG+    TE YRDFSLD+ DA                      E G+         V L+ LL  FF    +  +CE+C SE     ++   LPR+L+LH+KRF
Sbjct:  408 RNFQCEVDHTVICSHCGHKSSHTETYRDFSLDLPDA----------------------EWGLDPDLP----VDLELLLHKFFEDEHVLYKCEKCESEEATVHHTIHRLPRILILHLKRF 500          
BLAST of mRNA_P-wetherbeei_contig6211.1.1 vs. uniprot
Match: A0A7S0K999_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0K999_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 8.840e-6
Identity = 41/124 (33.06%), Postives = 55/124 (44.35%), Query Frame = 0
Query:  374 LLPTARAFHAEVDVTLTCACCGYSRIRTEFYRDFSLDVDDAAAGGSVAGGTAALATSGAPLFGESGVSSATAAASAVPLQRLLTSFFRPRELSLRCERCRSERVRAEYSFGALPRVLVLHVKRF 497
            L PT R F  EV+V+LTC  C Y+R R E YR  SLDV               +  S +P   E G+                  FF P++L L+CE+C  +    +     L   L+LH+KRF
Sbjct:  373 LFPTQRNFATEVEVSLTCCSCMYTRTRKELYRHLSLDV---------------VGNSSSPSVIEDGI----------------RRFFSPQKLCLKCEKCFCDSAIQKMEISKLSNGLLLHLKRF 465          
BLAST of mRNA_P-wetherbeei_contig6211.1.1 vs. uniprot
Match: A0A3M6UHA8_POCDA (USP domain-containing protein n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=A0A3M6UHA8_POCDA)

HSP 1 Score: 57.4 bits (137), Expect = 5.720e-5
Identity = 40/122 (32.79%), Postives = 55/122 (45.08%), Query Frame = 0
Query:  376 PTARAFHAEVDVTLTCACCGYSRIRTEFYRDFSLDVDDAAAGGSVAGGTAALATSGAPLFGESGVSSATAAASAVPLQRLLTSFFRPRELSLRCERCRSERVRAEYSFGALPRVLVLHVKRF 497
            P  R+F + V  T+ C  CG S  + E Y  FSLD+                     P+   S  S  +   SAV +Q LL   F   +L   C +C S+     +SF  LPRVL+LH+KR+
Sbjct:  308 PVTRSFESGVVHTVICKQCGESAPKEEIYHAFSLDI---------------------PVLCNS--SDKSPFGSAVSMQTLLEKHFEDEQLEYSCGKCESKEAIIAHSFSRLPRVLILHLKRY 406          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6211.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835YKZ9_9STRA3.190e-2740.77USP domain-containing protein n=1 Tax=Tribonema mi... [more]
D7G2P5_ECTSI2.070e-2330.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KUE2_9PHAE1.960e-2029.18USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A433Q0X4_9FUNG1.120e-735.29Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Endo... [more]
A0A7S0K999_9STRA8.840e-633.06Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Lept... [more]
A0A3M6UHA8_POCDA5.720e-532.79USP domain-containing protein n=2 Tax=Pocillopora ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 341..369
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 13..226
e-value: 1.2E-16
score: 62.7
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 329..498
e-value: 5.5E-14
score: 53.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..360
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..360
NoneNo IPR availablePANTHERPTHR21646UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 13..497
NoneNo IPR availableCDDcd02257Peptidase_C19coord: 381..497
e-value: 4.60836E-6
score: 45.9371
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 14..187
e-value: 1.4E-12
score: 47.7
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 14..29
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 13..498
score: 18.072952
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 14..497

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6211contigP-wetherbeei_contig6211:195..1733 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6211.1.1mRNA_P-wetherbeei_contig6211.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6211 195..1733 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6211.1.1 ID=prot_P-wetherbeei_contig6211.1.1|Name=mRNA_P-wetherbeei_contig6211.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=498bp
RHTNDHAAIERAGGLRNLGNTCYMNAAVQALLALTRYVDDMQCEHWIQAV
LAGEAEAPPPPPDVSDGRGDRGGGENGGGGGGGSGGGRSSDRQIVVVGKG
RADAALASAKGGGKGGGSSPPSASLYLALLQLSLAARGGPGGAAPDPALL
KLAVDRHTDRFVGNRQQDAHEFLTELVSTLDEELEPFVPAVERRIVVAAA
VTNVDAAARADATTDSAAANGAAGAGATGAAGAAAWVVVATPTACAPDGA
AAATGFAADAPAIYLSQKRYDGDAVLPAAVLETPGIAARDEATAGAAVSG
AGWAGDGTLALVTPAEPRVRPGPASGGGAASAAGAASGYSLAKTEDEEAD
EAANAKKAAEEEAVEATARLRRELLPTARAFHAEVDVTLTCACCGYSRIR
TEFYRDFSLDVDDAAAGGSVAGGTAALATSGAPLFGESGVSSATAAASAV
PLQRLLTSFFRPRELSLRCERCRSERVRAEYSFGALPRVLVLHVKRFR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf