prot_P-wetherbeei_contig6163.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6163.2.1
Unique Nameprot_P-wetherbeei_contig6163.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length375
Homology
BLAST of mRNA_P-wetherbeei_contig6163.2.1 vs. uniprot
Match: D8LT04_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT04_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 5.090e-11
Identity = 115/358 (32.12%), Postives = 158/358 (44.13%), Query Frame = 0
Query:   54 NTHAKPAGDFGLLSPKQPQDGWPWKWKLAGASILGVAVPWLGCYAIRHDRETREFVERFAPSF-----------VDWLRRRE-GGSFQGEDAEERAFRLAMREEQKRPSQVTLMLSTGDALNVRVPSSDAPLAWLATAAAEKLYGAPESSLSSAPVIILDFYFQD--DDGVATEQRGISKEDADEERDGFAAVIDYDGGEETSSIGNGLRPERGRETRRGVPPDVAACNSMSWWAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------------EKNAAIVAELQRRIGALEAEKRTGTRTIDDIDEDIAPL---QSELRKRT--RRRFLGLF 374
            +T A+PA      SP   + GWP K+K+AG +ILG  +P++  YA+ +D  +R  V + +P             V W R+R+ GG F  ED +   +   + +    P  V++ + TG     R+   DA   + +              L      + DF   D  D G    Q G      D    G ++   Y+   E SS  +             V  DVAACN  SWW +A                    XXXXXXXXXXXXXXXXXXXXXXXX                  E+  A++  L   + ALE +K TG R+IDD++E +  L   Q ELR++   RRRFLGLF
Sbjct:   36 STTAEPAKPS---SPAAEEPGWPLKYKVAGGAILGTIIPYIFSYAMANDPGSRRLVSKLSPGIATTLPGGGRLGVQWFRQRQKGGHFFDEDPKRLEYLAHVPDWINEP--VSMEIRTGSGETRRLDGLDAQTPFSSV-----------GRLVQGGGWLTDFDVLDEGDTGDGEAQSGQIPATWDISSSGASSASSYE--HEGSSPYSATSANTSSGVAAAVRRDVAACNIRSWWDIAALEQEQARQPAPLATVAGSAXXXXXXXXXXXXXXXXXXXXXXXXVGTVGAARGSSAKKMSNAEQARAMIQHLDEMVEALERDKLTGVRSIDDVEEAVRELRRQQKELRRKHPGRRRFLGLF 375          
BLAST of mRNA_P-wetherbeei_contig6163.2.1 vs. uniprot
Match: A0A836C9C2_9STRA (ADF-H domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9C2_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.980e-8
Identity = 89/282 (31.56%), Postives = 114/282 (40.43%), Query Frame = 0
Query:   97 YAIRHDRETREFVERFAPS---FVDWLRRREGGSFQGEDAEERAFRLAMREEQKRPSQVTLMLSTGDALNVRVPSSDAPLAWLATAAAEKLYGAPESSLSSAPVIILDFYFQDDDGVATEQRGI---------SKEDADEERDGFAAVIDYDGGEETSSIGNGLRPERGRETRRGVPPDVAACNSMSWWAMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKNAAIVAELQRRIGALEAEKRTGTRTIDDIDEDIAPLQSELRKRT 366
            YA+RHD ETR+FVE   P     V  LR+REGG F+ E    RA   A+R     P  VTL L +G+ + +       P++ L           P+   SS    + DF F D    A +             ++ DA    D     +D+                        +  DV  CN+ S WA  XXXXXXXXXX                                  E  AAI AEL  RI ALEA KRT  R+IDDI++DI  L++EL   T
Sbjct:    4 YALRHDWETRQFVESRVPGGRRLVAHLRQREGGHFEDESPVRRAHDAALRALYSIPVDVTLTLPSGETVTLPQVDPSVPVSAL-----------PQRVRSS----LSDFAFADVPDAAADXXXXXXXXXXXXXARGDAPATSD----AVDF------------------------IDDDVRRCNASSIWAAXXXXXXXXXXXAVPAAPRKGELSA---------------------EDAAAIAAELHARIAALEASKRTSARSIDDINDDIEHLRAELAAAT 221          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6163.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LT04_ECTSI5.090e-1132.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C9C2_9STRA2.980e-831.56ADF-H domain-containing protein n=1 Tax=Tribonema ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 277..297

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6163contigP-wetherbeei_contig6163:1663..3222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6163.2.1mRNA_P-wetherbeei_contig6163.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6163 1638..3225 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6163.2.1 ID=prot_P-wetherbeei_contig6163.2.1|Name=mRNA_P-wetherbeei_contig6163.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=375bp
MALQLQWAAYCRVLFRAYETSSSVRFRTSAYRRRRPRVFFFSSERSLSAA
AASNTHAKPAGDFGLLSPKQPQDGWPWKWKLAGASILGVAVPWLGCYAIR
HDRETREFVERFAPSFVDWLRRREGGSFQGEDAEERAFRLAMREEQKRPS
QVTLMLSTGDALNVRVPSSDAPLAWLATAAAEKLYGAPESSLSSAPVIIL
DFYFQDDDGVATEQRGISKEDADEERDGFAAVIDYDGGEETSSIGNGLRP
ERGRETRRGVPPDVAACNSMSWWAMAAQSQEQRREKLLCHRQQEEQKHQK
PALAGAAAGAATKRVQQREQEKNAAIVAELQRRIGALEAEKRTGTRTIDD
IDEDIAPLQSELRKRTRRRFLGLF*
back to top