prot_P-wetherbeei_contig6105.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6105.1.1
Unique Nameprot_P-wetherbeei_contig6105.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length445
Homology
BLAST of mRNA_P-wetherbeei_contig6105.1.1 vs. uniprot
Match: D7FMI8_ECTSI (NPC1_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMI8_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 5.870e-122
Identity = 198/430 (46.05%), Postives = 252/430 (58.60%), Query Frame = 0
Query:   11 TDDDGVCTFRQDCFQTGVDTACTARTYAANESATPFPMDAAHGFGVPHNVVWDGSYVDPDTGLCASGTPDEVGRCQIPFETPKGLSPVAPLMCPKFQDAGCCTWQANWSLYRNLGTLVQTFGSSTGCLACAVNLVRFWCALVCSPRQGHFATVHDPPRAVRRDDLTGADTEVLQGDIMVDAGLVCAIYESCRGTAIVGEATAMQSALGLLKFQMQTGAVGHGQYFFLSTTNASDADANGXXXXXXXXGVSRSLCDGSGCGDRTGEVAAGCKGFRREERTAMRLAAPEMGHQPSTAAMAITATARKGDELDVTVALEGSAVTAAAVTAATAALGGGKEALTEEALACDSFWDPGAVTPPFLYPPPRERRIGCGCEYCPAACAAGGGPGGLDEDDLRMSVFGSFNAALVGLWYATVASACVALAWWRRQRRR 440
            T D G C F Q+CFQ G+DT CT    A  ++A  FPMD++HGFGV H+ VWDGS  +P TGLC  G PD  GRC + F  PKGL  VAP++CP+++D+GCC+WQ N++LY+NLG LV++FGS+TGCLACAVNLV FWCALVCSP QG FA++HDPP   RRDDLTG  + VLQ D+ VD  + C IYESC+  A+VGE TAMQS LGLLKFQ+QTGAVGHG++FF S    + A+                    S CG++   V+ G           + + A E    P  AA A TA++                                   ++ + LACDSF+DPG+ T PF YPP RE  I C C+YC  AC+ GG       D   + V   F   LVG  YA V +  +AL WWRR +++
Sbjct:   36 TVDAGQCAFTQECFQFGLDTDCTPIP-AEGDTAVSFPMDSSHGFGVFHDKVWDGSVENPSTGLCDEGRPDSDGRCIVDFVAPKGLKDVAPIVCPQYKDSGCCSWQQNYALYQNLGLLVESFGSTTGCLACAVNLVNFWCALVCSPDQGAFASMHDPPFDQRRDDLTGGSSRVLQLDVNVDGDMACRIYESCKSIAVVGETTAMQSGLGLLKFQLQTGAVGHGEFFFPSFETNASAE--------------------SPCGNKRLPVSGG-----------LDVRATERKDDPQAAASAPTASSESSS-------------------------------MSFDTLACDSFFDPGSSTIPFAYPPKREDIISCTCDYCVQACSGGGSIDVDVSDKNPIPVLDGFGVGLVGGVYAAVVACSLALFWWRRNQKK 402          
BLAST of mRNA_P-wetherbeei_contig6105.1.1 vs. uniprot
Match: A0A835YTW9_9STRA (NPC1_N domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW9_9STRA)

HSP 1 Score: 304 bits (778), Expect = 9.440e-97
Identity = 138/227 (60.79%), Postives = 172/227 (75.77%), Query Frame = 0
Query:   13 DDGVCTFRQDCFQTGVDTACTARTYAANESATPFPMDAAHGFGVPHNVVWDGSYVDPDTGLCASGTPDEVGRCQIPFETPKGLSPVAPLMCPKFQDAGCCTWQANWSLYRNLGTLVQTFGSSTGCLACAVNLVRFWCALVCSPRQGHFATVHDPPRAVRRDDLTGA-DTEVLQGDIMVDAGLVCAIYESCRGTAIVGEATAMQSALGLLKFQMQTGAVGHGQYFFLS 238
            D   CTF QDCFQ GVDTACT R Y   ES+ PFPM+AAHGF V H+ +WDGS  D  +GLCA G PD  GRC   ++    L+ VAP+MCP++  AGCCTWQ N++L++NL TLV +FG +TGCLACA NLV  WCALVCSP+QG + T+HDPPRA+  DDLTGA    VLQ D+++DA   CA++ESC  TAI G +TAMQSA+GLL+FQ+QTGA+GHG+YF+L+
Sbjct:    7 DQNQCTFTQDCFQNGVDTACTPREYTDRESSAPFPMNAAHGFNVAHDTIWDGSMADASSGLCARGRPDVQGRCIQSWDA--SLAAVAPIMCPQYAGAGCCTWQQNYALFQNLRTLVDSFGGATGCLACAANLVNLWCALVCSPQQGSYVTLHDPPRALMDDDLTGAAQLPVLQADVVLDADYACAVFESCSATAIAGASTAMQSAVGLLQFQLQTGAIGHGEYFYLA 231          
BLAST of mRNA_P-wetherbeei_contig6105.1.1 vs. uniprot
Match: A0A6H5KYY4_9PHAE (NPC1_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYY4_9PHAE)

HSP 1 Score: 221 bits (562), Expect = 5.520e-65
Identity = 98/157 (62.42%), Postives = 121/157 (77.07%), Query Frame = 0
Query:   11 TDDDGVCTFRQDCFQTGVDTACTARTYAANESATPFPMDAAHGFGVPHNVVWDGSYVDPDTGLCASGTPDEVGRCQIPFETPKGLSPVAPLMCPKFQDAGCCTWQANWSLYRNLGTLVQTFGSSTGCLACAVNLVRFWCALVCSPRQGHFATVHDPP 167
            T D G C F Q+CFQ G+DT CT    A  ++A  FPMD++HGFGV H+ VWDGS  DP TGLC  G PD  GRC + F  PKGL  VAP++CP+++D+GCC+WQ N++LY+NLG LV++FGS+TGCLACAVNLV FWCALVCSP QG FA++HDPP
Sbjct:  151 TVDAGQCAFTQECFQFGLDTDCTPIP-AEGDTAVSFPMDSSHGFGVFHDKVWDGSVEDPSTGLCDEGRPDSDGRCIVDFVAPKGLKDVAPIICPQYKDSGCCSWQQNYALYQNLGLLVESFGSTTGCLACAVNLVNFWCALVCSPDQGAFASMHDPP 306          
BLAST of mRNA_P-wetherbeei_contig6105.1.1 vs. uniprot
Match: K3X0G1_GLOUD (NPC1_N domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X0G1_GLOUD)

HSP 1 Score: 144 bits (363), Expect = 1.990e-35
Identity = 90/249 (36.14%), Postives = 123/249 (49.40%), Query Frame = 0
Query:   14 DGVCTFRQDCFQTG----VDTACTARTYAANESATPFPMDAAHGFGVPHNVVWDGSYVDPDTGLCASGTPDEVGRCQIPFETPKGLSPVAPLMCPKFQDAGCCTWQANWSLYRNLGTLVQTFGSSTG--CLACAVNLVRFWCALVCSPRQGHFATVHDPPRAV--RRDDLTGADT-EVLQGDIMVDAGLVCAIYESCRGTAIVGEATAMQSALGLLKFQMQTGAVGHGQYFFL------STTNASDADA 247
            D  C   Q C   G     D AC    +A    A P PM  A    V       G       G C +G       C            +  + CP+++DA CC+WQ N ++  N   L  TF ++ G  C ACAVNL+  WC L+CSP Q  F  +H P  ++  R D +TG +  +VL+ D+ +D    CA+Y+SC+ TAI   A  M+S+LG L +QMQTGA+GHG+Y  L      +TT A+ ADA
Sbjct:   27 DAKCAMTQTCVNPGNVPDYD-ACIPEAHAV--PADPQPMRGASWANVTGGGACKGDSDCNSKGSCTNGA----CACLNDGIVAGAHCELFAIQCPEYKDAACCSWQQNQAMAENFKVLANTFANNDGGGCDACAVNLLNLWCGLMCSPHQADFMRMHLPFPSINHRLDPMTGEENVKVLEMDVTLDKPFTCALYDSCKNTAIASVAEGMKSSLGFLNYQMQTGAIGHGEYMLLHFTSANTTTKATSADA 268          
BLAST of mRNA_P-wetherbeei_contig6105.1.1 vs. uniprot
Match: A0A8K1CL61_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CL61_PYTOL)

HSP 1 Score: 142 bits (358), Expect = 7.970e-35
Identity = 79/214 (36.92%), Postives = 112/214 (52.34%), Query Frame = 0
Query:   43 ATPFPMDAAHGFGVPHNVVWDGSYVDPDT----GLCASGTPDEVGRCQIPFETPKGLSPVAPLMCPKFQDAGCCTWQANWSLYRNLGTLVQTFGSST--GCLACAVNLVRFWCALVCSPRQGHFATVH--DPPRAVRRDDLTGAD-TEVLQGDIMVDAGLVCAIYESCRGTAIVGEATAMQSALGLLKFQMQTGAVGHGQYFFLSTTNASDADA 247
            A P P+D     G     V  G     D     G C  G       CQ+   T         + CP+++DA CC+WQ N +L +N   +   FG ++  GC ACA NL+  WC ++CSPRQ  F  +H   P  + R D +TG D  +VL+ D+ +     CA+++SC+ TAI   + AM+S+LG L +QMQTGA+GHG+Y  L     S+A A
Sbjct:   50 ANPMPVDPKPMTGAGWANVTGGGACTTDKECNKGACVRGN----CVCQVDGMTAGAHCDDFAIQCPEYKDAACCSWQQNQALAQNFKLVTTIFGKNSVGGCDACATNLLELWCGMICSPRQSEFMKMHLPYPSNSYRPDPMTGKDHVKVLEMDVTLAKDFTCAVFDSCKNTAIASVSEAMKSSLGFLNYQMQTGAIGHGEYMHLHFNATSNATA 259          
BLAST of mRNA_P-wetherbeei_contig6105.1.1 vs. uniprot
Match: A0A2D4C7W7_PYTIN (NPC1_N domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C7W7_PYTIN)

HSP 1 Score: 139 bits (350), Expect = 6.570e-34
Identity = 83/213 (38.97%), Postives = 116/213 (54.46%), Query Frame = 0
Query:   45 PFPMDAAHGFGVPHNVVWDGSYVDPDTGLCASGTPDEVGRCQIPFETPKGLSPVA-----PLMCPKFQDAGCCTWQANWSLYRNLGTLVQTFGSSTG--CLACAVNLVRFWCALVCSPRQGHFATVHDPPRAV--RRDDLTGADT-EVLQGDIMVDAGLVCAIYESCRGTAIVGEATAMQSALGLLKFQMQTGAVGHGQYFFLSTTNASDADA 247
            P P     G G   NV   G+ V  D      G   E  RC+ P +   GL+  A      + CP+ +DA CCTWQ N  + +N   L   FG + G  C ACA NL++ WC LVCSPRQ  F  +H P  ++  R+D +T  D  +VL+ D+ +     CA+++SC+ TAI   + AM+S+LG L +Q QTGA+GHG+Y +L     S+A A
Sbjct:   25 PVPPQPMQGPGWA-NVTGGGACVTDDDCGHKKGKCVEK-RCECPQD---GLTAGAHCDAYAIQCPEHKDAACCTWQQNEGIAQNFKLLASVFGQNDGGGCDACAANLMQLWCGLVCSPRQDEFMKMHLPYPSINHRKDPMTDKDNVKVLELDVTLSKSFTCALFDSCKNTAIASVSEAMKSSLGFLNYQAQTGAIGHGEYMYLHFNATSNATA 232          
BLAST of mRNA_P-wetherbeei_contig6105.1.1 vs. uniprot
Match: H3H0H3_PHYRM (NPC1_N domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H0H3_PHYRM)

HSP 1 Score: 127 bits (319), Expect = 4.540e-30
Identity = 62/150 (41.33%), Postives = 89/150 (59.33%), Query Frame = 0
Query:  101 LMCPKFQDAGCCTWQANWSLYRNLGTLVQTFG--SSTGCLACAVNLVRFWCALVCSPRQGHFATVHDPPRAV--RRDDLTGAD-TEVLQGDIMVDAGLVCAIYESCRGTAIVGEATAMQSALGLLKFQMQTGAVGHGQYFFLSTTNASDA 245
            + CP ++D  CC+WQ N ++  N   +   F   S+ GC ACA NL+  WC LVCSP Q  F  +  P  +   R D +TG +  +VL+ D+ +D    CA+++SC+ TA+   A AM+S+LG L +QMQ GAVGHG+Y  L    + DA
Sbjct:  104 IQCPAYKDDACCSWQQNQAMAENFKLVASVFAKNSAGGCDACAANLMNLWCGLVCSPEQDQFMQMAHPWPSTNYRPDPMTGKEKVKVLELDVALDKDFTCAVFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEYISLKFNASKDA 253          
BLAST of mRNA_P-wetherbeei_contig6105.1.1 vs. uniprot
Match: A0A662XWU5_9STRA (NPC1_N domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XWU5_9STRA)

HSP 1 Score: 126 bits (317), Expect = 6.260e-30
Identity = 61/150 (40.67%), Postives = 90/150 (60.00%), Query Frame = 0
Query:  101 LMCPKFQDAGCCTWQANWSLYRNLGTLVQTFG--SSTGCLACAVNLVRFWCALVCSPRQGHFATVHDP--PRAVRRDDLTGAD-TEVLQGDIMVDAGLVCAIYESCRGTAIVGEATAMQSALGLLKFQMQTGAVGHGQYFFLSTTNASDA 245
            + CP ++D  CC+WQ N ++  N   +   F   S+ GC ACA NL+  WC LVCSP Q  F  +  P      R D +TG +  +VL+ D+ +D    CA+++SC+ TA+   A AM+S+LG L +QMQ GAVGHG++  L+   ++DA
Sbjct:   12 IQCPAYKDDACCSWQQNRAMAENFQLVASVFARNSAGGCDACAANLMNLWCGLVCSPAQDQFMQLAHPWPSTTYRPDPMTGKERVKVLELDVALDKDFTCAVFDSCKNTAMASMAAAMKSSLGFLNYQMQVGAVGHGEFITLAFNASADA 161          
BLAST of mRNA_P-wetherbeei_contig6105.1.1 vs. uniprot
Match: A0A5D6YG03_9STRA (NPC1_N domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YG03_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.740e-29
Identity = 77/237 (32.49%), Postives = 111/237 (46.84%), Query Frame = 0
Query:   17 CTFRQDCFQTGVDT---ACTARTYAANESATPFPMDAAHGFGVPHNVVWDGSYVDPDTGLCASGTPDEVGRCQIPFETPKGLSPVAPLMCPKFQDAGCCTWQANWSLYRNLGTLVQTFGSSTG--CLACAVNLVRFWCALVCSPRQGHFATVH--DPPRAVRRDDLTGAD-TEVLQGDIMVDAGLVCAIYESCRGTAIVGEATAMQSALGLLKFQMQTGAVGHGQYFFLSTTNASDA 245
            C   Q C   G +    AC    +   E   P PM       V             D G C  GT      C+           +  + CP+++DA CC+WQ N  +  N   +   FG ++G  C ACA N++  WC L CSPRQ  F  +    P  + R D +TG +  +VL+  + +D    C +++SCR TAI   + AM+S+LG L +Q+QTGAVGHGQ+  L   + + A
Sbjct:   22 CAMTQTCVNPGNEPDFDACIPEAH--REPVDPQPMVGPQWANVTGGGACTTDADCSDKGECVRGT----CACRDEGMVAGAHCELFAIQCPEYKDAACCSWQQNQGMAENFKLVASVFGKNSGGGCDACAANVLSLWCGLTCSPRQHEFLQMRLPFPSTSYRPDPMTGEERVKVLELAVTLDKAFTCRLFDSCRNTAIASMSEAMKSSLGFLNYQVQTGAVGHGQFISLRFADGAQA 252          
BLAST of mRNA_P-wetherbeei_contig6105.1.1 vs. uniprot
Match: A0A067D0Z9_SAPPC (NPC1_N domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D0Z9_SAPPC)

HSP 1 Score: 126 bits (316), Expect = 6.200e-29
Identity = 83/230 (36.09%), Postives = 114/230 (49.57%), Query Frame = 0
Query:   17 CTFRQDCFQTG----VDTACTARTYAANESATPFPMDAAHGFGVPHNVVWDGSYVDPDTGLCASGT-PDEVGRCQIPFETPKGLSPVAPLMCPKFQDAGCCTWQANWSLYRNLGTLVQTFG--SSTGCLACAVNLVRFWCALVCSPRQGHFATVH--DPPRAVRRDDLTGAD-TEVLQGDIMVDAGLVCAIYESCRGTAIVGEATAMQSALGLLKFQMQTGAVGHGQYFF 236
            C   QDC   G     D AC  +  A+   A P PM      G     V  G     DT  C  GT   +   C+    T         + CP+++ + CC+WQ N +L  N   +   FG  S+ GC ACA N++R WC LVC+P Q  F  +H   P    R D +TG D  +VL+ D+ +     CA+++SC+ TAI   + A +S+LG L +Q QTGAVGHG+Y F
Sbjct:   23 CVMTQDCVNPGNIPDYD-ACIPKALAS--VAPPMPMR-----GDGWATVTGGGTCKADTD-CHQGTCVKKACVCRNDGVTAGAHCDDFAIQCPEYESSACCSWQQNRALADNFKLIATMFGRNSAGGCDACAANMMRMWCGLVCAPNQADFMKMHLPYPSNNYRLDSMTGKDHVKVLEMDVNLAKPFTCALFDSCKHTAIASMSDAFKSSLGFLNYQGQTGAVGHGEYLF 243          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6105.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMI8_ECTSI5.870e-12246.05NPC1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835YTW9_9STRA9.440e-9760.79NPC1_N domain-containing protein n=1 Tax=Tribonema... [more]
A0A6H5KYY4_9PHAE5.520e-6562.42NPC1_N domain-containing protein n=1 Tax=Ectocarpu... [more]
K3X0G1_GLOUD1.990e-3536.14NPC1_N domain-containing protein n=1 Tax=Globispor... [more]
A0A8K1CL61_PYTOL7.970e-3536.92Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A2D4C7W7_PYTIN6.570e-3438.97NPC1_N domain-containing protein n=1 Tax=Pythium i... [more]
H3H0H3_PHYRM4.540e-3041.33NPC1_N domain-containing protein n=1 Tax=Phytophth... [more]
A0A662XWU5_9STRA6.260e-3040.67NPC1_N domain-containing protein n=1 Tax=Nothophyt... [more]
A0A5D6YG03_9STRA2.740e-2932.49NPC1_N domain-containing protein n=1 Tax=Pythium b... [more]
A0A067D0Z9_SAPPC6.200e-2936.09NPC1_N domain-containing protein n=2 Tax=Saprolegn... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032190Niemann-Pick C1, N-terminalPFAMPF16414NPC1_Ncoord: 103..207
e-value: 4.8E-10
score: 39.5
NoneNo IPR availablePANTHERPTHR45727NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1coord: 101..218
NoneNo IPR availablePANTHERPTHR45727:SF2NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1coord: 101..218

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6105contigP-wetherbeei_contig6105:615..3105 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6105.1.1mRNA_P-wetherbeei_contig6105.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6105 418..3137 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6105.1.1 ID=prot_P-wetherbeei_contig6105.1.1|Name=mRNA_P-wetherbeei_contig6105.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=445bp
MMASAPHGVDTDDDGVCTFRQDCFQTGVDTACTARTYAANESATPFPMDA
AHGFGVPHNVVWDGSYVDPDTGLCASGTPDEVGRCQIPFETPKGLSPVAP
LMCPKFQDAGCCTWQANWSLYRNLGTLVQTFGSSTGCLACAVNLVRFWCA
LVCSPRQGHFATVHDPPRAVRRDDLTGADTEVLQGDIMVDAGLVCAIYES
CRGTAIVGEATAMQSALGLLKFQMQTGAVGHGQYFFLSTTNASDADANGG
GGDDDGGGVSRSLCDGSGCGDRTGEVAAGCKGFRREERTAMRLAAPEMGH
QPSTAAMAITATARKGDELDVTVALEGSAVTAAAVTAATAALGGGKEALT
EEALACDSFWDPGAVTPPFLYPPPRERRIGCGCEYCPAACAAGGGPGGLD
EDDLRMSVFGSFNAALVGLWYATVASACVALAWWRRQRRRGGAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032190NPC1_N