prot_P-wetherbeei_contig6055.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6055.4.1
Unique Nameprot_P-wetherbeei_contig6055.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length200
Homology
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A537RLD2_9PROT (TPP_enzyme_C domain-containing protein n=4 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RLD2_9PROT)

HSP 1 Score: 311 bits (796), Expect = 1.050e-105
Identity = 149/193 (77.20%), Postives = 167/193 (86.53%), Query Frame = 0
Query:    6 LHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLGTSKSGAFD 198
            L+RADLTKRLV KL RDEAVVAGIGNTN+DL+ AGHRPQNFYML SMGLACPIA GVALAQPERGVIALEGDGSILMALGCL TI  V PRNLTI+I DNG+YQITG+Q  AT    DIVA+A+GAGIANS WV+DE HFEEL+ RRF+DGGP+LLAAKIDD+PG+ QT RDP +IR RFM+GLGT ++ A D
Sbjct:    9 LNRADLTKRLVTKLARDEAVVAGIGNTNFDLYAAGHRPQNFYMLGSMGLACPIAFGVALAQPERGVIALEGDGSILMALGCLATIGMVKPRNLTIVIMDNGIYQITGRQKAATASSADIVAIARGAGIANSHWVRDEKHFEELVSRRFDDGGPVLLAAKIDDKPGIAQTVRDPPLIRNRFMRGLGTGRASALD 201          
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A6N7GSW5_9HYPH (TPP_enzyme_C domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GSW5_9HYPH)

HSP 1 Score: 306 bits (784), Expect = 9.630e-104
Identity = 145/196 (73.98%), Postives = 167/196 (85.20%), Query Frame = 0
Query:    3 SKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLGTSKSGAFD 198
            +K  +R +LTKRLVG+LK +EAVVAGIGNTN+DLF AGHRPQNFYML SMG+A PIA+GVA+AQPERGVIALEGDGS+LM LGCLTT+A V PRNLTII+ DNG+YQITGKQ TATGG TDIVAVA+G GIA S WV D+ HF+EL+ RRF+DGGP+LLA KIDD+PG  QTPRDP++IR RFMKGLG    G  D
Sbjct:   15 NKIFNRTELTKRLVGQLKHEEAVVAGIGNTNFDLFAAGHRPQNFYMLGSMGIAIPIALGVAIAQPERGVIALEGDGSLLMGLGCLTTVATVRPRNLTIIVMDNGLYQITGKQTTATGGGTDIVAVARGCGIAASHWVHDDTHFDELIARRFDDGGPVLLAVKIDDKPGAAQTPRDPALIRNRFMKGLGIGSGGVLD 210          
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A6L5FDZ9_9HYPH (TPP_enzyme_C domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FDZ9_9HYPH)

HSP 1 Score: 291 bits (746), Expect = 9.170e-98
Identity = 143/193 (74.09%), Postives = 166/193 (86.01%), Query Frame = 0
Query:    6 LHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLGTSKSGAFD 198
            L+RA LT+RLV  LK DEAVVAGIGNTN+DL+ AGHR QNFYML SMGLACPIA+GVALAQP+RGVIALEGDGSILMALGCLTTIANV PRNLTI+I DNG+YQITGKQ TAT G++DIVA+A+GAG+  S W+ DE HF+ L+DR FE GGP+L AA+IDD PG+ +T RDP++IRQ FMKGLGTS+ G  D
Sbjct:   32 LNRAALTRRLVEILKHDEAVVAGIGNTNFDLWAAGHRKQNFYMLGSMGLACPIALGVALAQPKRGVIALEGDGSILMALGCLTTIANVRPRNLTIVIMDNGLYQITGKQTTATHGVSDIVAIARGAGLEAS-WIADETHFDVLIDRSFEHGGPVLYAARIDDEPGVGKTVRDPALIRQSFMKGLGTSRGGDLD 223          
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A176YST2_9BRAD (TPP_enzyme_C domain-containing protein n=1 Tax=Bradyrhizobium neotropicale TaxID=1497615 RepID=A0A176YST2_9BRAD)

HSP 1 Score: 248 bits (632), Expect = 8.360e-81
Identity = 118/188 (62.77%), Postives = 146/188 (77.66%), Query Frame = 0
Query:    3 SKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLG 190
            +K ++R D+T RL+ KLK +EAV+ GIGNTN+DL+ AGHRPQNFYML SMGLA PIA+GVALAQP+R V ALEGDGS+LM LG L+TIA + P+NLT+I+ DNG+YQITG Q T   GI D+VA+A G+G+ NS W  DE  FE L+D   E  GP L+AA+IDD+PG+  T RDP  IR+RFM GLG
Sbjct:    6 TKVMNRFDVTSRLIAKLKNEEAVIGGIGNTNFDLWAAGHRPQNFYMLGSMGLAFPIALGVALAQPDRRVFALEGDGSLLMQLGTLSTIATLKPKNLTMIVMDNGIYQITGAQPTPAAGIADLVAIAAGSGLTNSSWAADEDDFERLIDEALEASGPSLIAARIDDKPGVGTTRRDPVQIRERFMHGLG 193          
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A525JIU3_BRASZ (TPP_enzyme_C domain-containing protein n=1 Tax=Bradyrhizobium sp. TaxID=376 RepID=A0A525JIU3_BRASZ)

HSP 1 Score: 247 bits (631), Expect = 1.360e-80
Identity = 120/192 (62.50%), Postives = 148/192 (77.08%), Query Frame = 0
Query:    3 SKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLGTSKS 194
            +K ++R DLT RLV KLK +EAVV GIGNTN+DL+ AGHRPQNFYML SMGLA PIA+GVALAQP+R V ALEGDGS+LM +GCL+TIA  +P+NLT+I+ DNGVYQITG Q T    + DIVA+A+G+G+ANS W  DE  FE L+D+      P L+A +IDD+PG  QT RDP  IR+RFM GLG  ++
Sbjct:   10 TKVMNRFDLTSRLVAKLKHEEAVVGGIGNTNFDLWAAGHRPQNFYMLGSMGLAFPIALGVALAQPKRRVFALEGDGSLLMQMGCLSTIATQAPKNLTMIVMDNGVYQITGAQPTPAAAVADIVAIAQGSGLANSAWAADEEDFERLVDQSLTSTVPTLIAVRIDDKPGTGQTRRDPVQIRERFMLGLGVRQA 201          
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A1H1KEM1_9HYPH (Thiamine pyrophosphate enzyme, C-terminal TPP binding domain n=3 Tax=unclassified Hyphomicrobiales TaxID=41292 RepID=A0A1H1KEM1_9HYPH)

HSP 1 Score: 247 bits (631), Expect = 1.400e-80
Identity = 118/185 (63.78%), Postives = 146/185 (78.92%), Query Frame = 0
Query:    6 LHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLG 190
            ++R DLT+RLV +L+ DEAV+ GIGNTN+DL+ +G RPQNFYML SMGLACPIA+GVALAQP R V+ALEGDGS+LM LG LTTIA++ P+NL II+ DNG YQITG Q T T  + DIVA+AKGAGIA + W  DE  FE L+ R   + GP L+AA+IDD+P +  T RDP++IR RFM+GLG
Sbjct:   17 MNRFDLTQRLVARLEHDEAVIGGIGNTNFDLWASGQRPQNFYMLGSMGLACPIALGVALAQPGRRVLALEGDGSLLMQLGSLTTIASLRPKNLVIIVMDNGCYQITGGQKTTTSTVADIVAIAKGAGIAQASWAADEHMFESLVARSLSEDGPSLIAARIDDKPAVATTERDPALIRDRFMRGLG 201          
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: UPI0004985AD5 (thiamine pyrophosphate-dependent enzyme n=1 Tax=Bradyrhizobium sp. URHD0069 TaxID=1380355 RepID=UPI0004985AD5)

HSP 1 Score: 247 bits (631), Expect = 1.450e-80
Identity = 118/192 (61.46%), Postives = 149/192 (77.60%), Query Frame = 0
Query:    3 SKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLGTSKS 194
            +K ++R DLT RLV KLK +EAV+ GIGNTN+DL+ AGHRPQNFYML SMGLA PIA+GVALAQP+R V ALEGDGS+LM LGCL+TIA ++P+NLT+I+ DNGVYQITG Q T    ++DIVA+A G G+ANS W  DE  FE L+++     GP L+A +ID++PG+  T RDP  IR+RFM GLG  ++
Sbjct:   12 TKVMNRFDLTSRLVAKLKNEEAVIGGIGNTNFDLWAAGHRPQNFYMLGSMGLAFPIALGVALAQPQRRVFALEGDGSLLMQLGCLSTIATLAPKNLTMIVMDNGVYQITGAQPTPAAEVSDIVAIATGCGLANSAWAADEEDFERLVEQSLSGSGPTLIAVRIDEKPGVGATRRDPVQIRERFMLGLGVRQA 203          
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A0A1M5N001_9BRAD (Thiamine pyrophosphate enzyme, C-terminal TPP binding domain n=3 Tax=Bradyrhizobium TaxID=374 RepID=A0A1M5N001_9BRAD)

HSP 1 Score: 246 bits (629), Expect = 2.920e-80
Identity = 118/188 (62.77%), Postives = 144/188 (76.60%), Query Frame = 0
Query:    3 SKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLG 190
            +K ++R DLT RLV KLK DEAVV GIGNTN+DL+ AGHRPQNFYML SMGLA PIA+GVALAQP+R V ALEGDGS+LM +GCL+TIA + P+NLT+++ DNGVYQITG Q T    ++DIVA+A G G++NS W  DE  FE L+D      GP L+  +IDD+PG+  T RDP  IR+RFM GLG
Sbjct:   12 TKVMNRFDLTSRLVAKLKNDEAVVGGIGNTNFDLWAAGHRPQNFYMLGSMGLAFPIALGVALAQPKRRVFALEGDGSLLMQMGCLSTIATLKPKNLTMVVMDNGVYQITGAQPTPAAAVSDIVAIAAGCGLSNSAWAADEEDFERLVDLSLSASGPTLIGVRIDDKPGVGTTRRDPVQIRERFMVGLG 199          
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: M4Z6H1_9BRAD (Putative Sulfopyruvate decarboxylase beta subunit n=2 Tax=Bradyrhizobium TaxID=374 RepID=M4Z6H1_9BRAD)

HSP 1 Score: 245 bits (625), Expect = 1.000e-79
Identity = 120/185 (64.86%), Postives = 143/185 (77.30%), Query Frame = 0
Query:    6 LHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLG 190
            ++R DLT RLV KL  +EAV+ GIGNTN+DL+ AG RPQNFYML SMGLACPIA+GVALAQP+R V ALEGDGS+LM LGCLTTIA ++P+NL II+ DNG+YQITG Q T      DIVA+A G GIA S W  DE  FE L+D   E  GP L+AA+IDD+PG+  T RDP+ IR+RFM+GLG
Sbjct:   11 MNRTDLTCRLVAKLTHEEAVIGGIGNTNFDLWAAGQRPQNFYMLGSMGLACPIALGVALAQPQRRVFALEGDGSLLMQLGCLTTIATLAPKNLAIIVMDNGIYQITGNQPTPARN-ADIVAIAAGCGIAASHWAADEEDFERLVDAVLETAGPTLIAARIDDKPGVGATRRDPAQIRERFMQGLG 194          
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Match: A4YXL0_BRASO (Putative Sulfopyruvate decarboxylase (Beta subunit) n=4 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A4YXL0_BRASO)

HSP 1 Score: 243 bits (620), Expect = 5.770e-79
Identity = 122/188 (64.89%), Postives = 147/188 (78.19%), Query Frame = 0
Query:    3 SKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLASMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTIIIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLDRRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLG 190
            +K ++R DLT RLV KL R+EAV+ GIGNTN+DL+ AG RPQNFYML SMGLACPIA+GVALAQP+R V ALEGDGS+LM LGCLTTIA+++  NLTII+ DNG+YQITG Q T      DIVA+A G GI +S W  DEA FE L+D   E  GP+L+A KIDD+PG+  T RDP+ IR+RFM+GLG
Sbjct:    8 TKIMNRHDLTCRLVAKLTREEAVIGGIGNTNFDLWAAGPRPQNFYMLGSMGLACPIALGVALAQPQRRVFALEGDGSLLMQLGCLTTIASLALSNLTIIVMDNGIYQITGSQPTPAKQ-ADIVAIAAGCGIVSSHWAADEADFERLVDAALELPGPMLIAVKIDDKPGVGATHRDPAQIRERFMQGLG 194          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6055.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537RLD2_9PROT1.050e-10577.20TPP_enzyme_C domain-containing protein n=4 Tax=Alp... [more]
A0A6N7GSW5_9HYPH9.630e-10473.98TPP_enzyme_C domain-containing protein n=1 Tax=Hyp... [more]
A0A6L5FDZ9_9HYPH9.170e-9874.09TPP_enzyme_C domain-containing protein n=1 Tax=Hyp... [more]
A0A176YST2_9BRAD8.360e-8162.77TPP_enzyme_C domain-containing protein n=1 Tax=Bra... [more]
A0A525JIU3_BRASZ1.360e-8062.50TPP_enzyme_C domain-containing protein n=1 Tax=Bra... [more]
A0A1H1KEM1_9HYPH1.400e-8063.78Thiamine pyrophosphate enzyme, C-terminal TPP bind... [more]
UPI0004985AD51.450e-8061.46thiamine pyrophosphate-dependent enzyme n=1 Tax=Br... [more]
A0A1M5N001_9BRAD2.920e-8062.77Thiamine pyrophosphate enzyme, C-terminal TPP bind... [more]
M4Z6H1_9BRAD1.000e-7964.86Putative Sulfopyruvate decarboxylase beta subunit ... [more]
A4YXL0_BRASO5.770e-7964.89Putative Sulfopyruvate decarboxylase (Beta subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.970coord: 2..179
e-value: 2.4E-30
score: 107.1
NoneNo IPR availablePIRSRPIRSR036565-2PIRSR036565-2coord: 4..110
e-value: 7.0E-8
score: 29.1
NoneNo IPR availablePANTHERPTHR42818SULFOPYRUVATE DECARBOXYLASE SUBUNIT ALPHAcoord: 2..189
IPR011766Thiamine pyrophosphate enzyme, C-terminal TPP-bindingPFAMPF02775TPP_enzyme_Ccoord: 43..161
e-value: 4.0E-21
score: 75.4
IPR000399TPP-binding enzyme, conserved sitePROSITEPS00187TPP_ENZYMEScoord: 60..79
IPR029061Thiamin diphosphate-binding foldSUPERFAMILY52518Thiamin diphosphate-binding fold (THDP-binding)coord: 3..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6055contigP-wetherbeei_contig6055:2681..3280 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6055.4.1mRNA_P-wetherbeei_contig6055.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6055 2681..3280 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6055.4.1 ID=prot_P-wetherbeei_contig6055.4.1|Name=mRNA_P-wetherbeei_contig6055.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=200bp
MPSKRLHRADLTKRLVGKLKRDEAVVAGIGNTNWDLFGAGHRPQNFYMLA
SMGLACPIAMGVALAQPERGVIALEGDGSILMALGCLTTIANVSPRNLTI
IIWDNGVYQITGKQATATGGITDIVAVAKGAGIANSRWVQDEAHFEELLD
RRFEDGGPILLAAKIDDRPGLIQTPRDPSVIRQRFMKGLGTSKSGAFDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011766TPP_enzyme-bd_C
IPR000399TPP-bd_CS
IPR029061THDP-binding