prot_P-wetherbeei_contig604.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig604.2.1
Unique Nameprot_P-wetherbeei_contig604.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length532
Homology
BLAST of mRNA_P-wetherbeei_contig604.2.1 vs. uniprot
Match: A0A6H5K892_9PHAE (APG6 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K892_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.880e-20
Identity = 106/309 (34.30%), Postives = 151/309 (48.87%), Query Frame = 0
Query:  213 ALQPLRDALAVSRAEQCSLQSDVTMLHAQRAALDAQEERLWAALADXXXXXXXXXXXRGALLAAVSGEAARADALTSVAPLEDLFPLGRSREGFPTVGGYRLAQGPDDRERLQWSEVAAAWGAAVALVRCVADCTGHRSPRYVAVALGPDTYLIERPAATGVKAGVAATAEGVRHIFSGSGGGGGSTIC-------FGVGSGSXXXXXRSGRKALT----AAIAAFLGWSGEVMAHTAAALAIADHDGSGSRSIRDAVAGDDRDGPPHPQTASGSIGGVQMEGLRGGEAWRNALWMLWRNLKWLQGRAS 510
            A  P   AL +++     L+ ++  L  QR AL A+    WAAL++              LL A    A  A  L+  + L +LF + R  +GFP++ G+RL + PDD+ RL W+E+ AAWG AV LVRCV++    RS R+  V L   + +IE   A+G  +G  +  +GV     G      +++        F  G G XXXXXRSG         AA+ AFL  S EVMA     +     +G  S      VA  D  G P+ QT   ++GGV +  L+G  +W+  L  L +NL+W  G AS
Sbjct:  423 AASPFAQALRMAQETSVQLRRELRSLETQRGALCARGSEAWAALSELAYARGVLEDECRELLQASREVAENAAHLSERSALSELFSI-RHVDGFPSINGFRLGRAPDDKRRLHWNEINAAWGEAVLLVRCVSNAVDFRSKRFRLVPLNCTSRVIEL--ASGDNSGGRSQEDGVGRRGHGPEPTAATSVVVVCAHDLFSTGGGGXXXXXRSGSGEENLRHLAAVRAFLACSAEVMAFLERRVLERRLEGEVSAGAA-CVAWSDV-GVPYKQTED-AVGGVSIGALKGQGSWKPWLCQLVKNLEWAVGAAS 725          
BLAST of mRNA_P-wetherbeei_contig604.2.1 vs. uniprot
Match: A0A836CKE4_9STRA (APG6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKE4_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 1.890e-8
Identity = 109/376 (28.99%), Postives = 146/376 (38.83%), Query Frame = 0
Query:   13 SCCLCGVAPDMIAG--GRGSLAGGIDDSYVVLPDQQPLLSESYFALPGRRDMANTMVDGDGWMGGSVAQFSHTGLGDAVRRASTLALYAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSICGLKPEPTFCRHCFDAVLESIAEDCDRIGAHAEACRSLLA-CFDASADKPLLAGETDSKRAAAAAEXXXXXXXTAALQPLRDALAVSRAEQCSLQSDVTMLHAQRAALDAQEE--RLWAALADXXXXXXXXXXXRGALLAAVSGEAARADALTSVAPLEDLFPL------------------GRSREGF------PTVGGYRLAQGPDDRERLQWSEVAAAWGAAVALVRCVADCTGHRSPRYVAVAL 359
            +CC CG A D++    G G    G D+S+VVLP  QP++SESYF  P    +A+ +      + GS+   SH GL   VRR + + L+A                                           P P  CR C +A+L  I ++  R  A   A R   +   D  A  P        + AAAAA           L  LR+ALA +R E   L + +  L A+R A  A+E    L  A A   XXXXXXXXX                       L  +F +                     R GF      P++ G RLA+  DDR  L W+E+AAAWG A      +A+  G  S  +  V L
Sbjct:    4 TCCRCGEA-DLVDDRYGVGMAQRGADESFVVLPPMQPVISESYFGAPASTSVAHELA-----IAGSMVHISHEGLSHHVRRTTRVHLHAFGPRLTPEKQQPEQERQ-------------------------SPRPV-CRQCCEAILRLIDQEARRATADIAAYRIFQSQLLDTCALAP-------GEGAAAAA-------LRGELALLREALATTRQEHDHLAAQLRSL-AEREADAARETVALLKGARAAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQPPVLATVFRIVCTPAXXXXXXXXXXSTSAPQRFGFGGATAAPSINGLRLARESDDRVHLDWAELAAAWGQAAQAAVAMANAAGFVSRAWRVVPL 332          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig604.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K892_9PHAE1.880e-2034.30APG6 domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A836CKE4_9STRA1.890e-828.99APG6 domain-containing protein n=1 Tax=Tribonema m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038274Atg6/Beclin C-terminal domain superfamilyGENE3D1.10.418.40Autophagy protein 6/Beclin 1coord: 264..513
e-value: 1.9E-10
score: 42.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 453..481
NoneNo IPR availablePANTHERPTHR12768:SF4BECLIN-1coord: 147..505
IPR007243Atg6/BeclinPANTHERPTHR12768BECLIN 1coord: 147..505

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig604contigP-wetherbeei_contig604:1599..3194 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig604.2.1mRNA_P-wetherbeei_contig604.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig604 1599..3338 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig604.2.1 ID=prot_P-wetherbeei_contig604.2.1|Name=mRNA_P-wetherbeei_contig604.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=532bp
MWEGRGNVGPFPSCCLCGVAPDMIAGGRGSLAGGIDDSYVVLPDQQPLLS
ESYFALPGRRDMANTMVDGDGWMGGSVAQFSHTGLGDAVRRASTLALYAA
PPSAVAAIASDDSATRERRGAAGAGDGGGGGGGGGSSICGLKPEPTFCRH
CFDAVLESIAEDCDRIGAHAEACRSLLACFDASADKPLLAGETDSKRAAA
AAEAAAAAEATAALQPLRDALAVSRAEQCSLQSDVTMLHAQRAALDAQEE
RLWAALADAQRAALEADDERGALLAAVSGEAARADALTSVAPLEDLFPLG
RSREGFPTVGGYRLAQGPDDRERLQWSEVAAAWGAAVALVRCVADCTGHR
SPRYVAVALGPDTYLIERPAATGVKAGVAATAEGVRHIFSGSGGGGGSTI
CFGVGSGSSGGGGRSGRKALTAAIAAFLGWSGEVMAHTAAALAIADHDGS
GSRSIRDAVAGDDRDGPPHPQTASGSIGGVQMEGLRGGEAWRNALWMLWR
NLKWLQGRASRAAQLAARLPPSGAFVAASGH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038274Atg6/Beclin_C_sf
IPR007243Atg6/Beclin