prot_P-wetherbeei_contig6030.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6030.1.1
Unique Nameprot_P-wetherbeei_contig6030.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length192
Homology
BLAST of mRNA_P-wetherbeei_contig6030.1.1 vs. uniprot
Match: D8LBL5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBL5_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 2.340e-35
Identity = 79/177 (44.63%), Postives = 105/177 (59.32%), Query Frame = 0
Query:    1 HASVICLGLISCGLRDGPGADLLCAVVAAHGSRRDSKTWAVGLRKRFSYETN-AAAAPRGVAVMGCLIIDASENRLGDAGACAIARALETDSWLVGLSLAKNSIGRRGVGCLEAALVQNASLCALVLDGNPGVAAAEERRFLVALERRTL-PAVVSHEPLVGLRLCGWGFVAEDSFE 175
            H S++ L L  CGL       L+ +V+ AH +RR+   W+ GLR+      + AAAAP  ++  GCL +D S+NRLGDAG  A+AR L++D+WL+G++LA+N I   G   L   L  NA+LCALVLDGNP V    ERR    LE R++ P  V  EP V L L  WGF A    +
Sbjct:  233 HPSLVALSLRGCGLVGEASGRLVSSVLRAHAARREGLVWSAGLRRPTGVVGHTAAAAPARISTAGCLAVDLSDNRLGDAGVHAVARGLQSDTWLLGVNLARNGITDHGAALLSVCLQHNATLCALVLDGNPEVGHGAERRITEELETRSMMPEAVLEEPEVVLTLASWGFSAHTGVD 409          
BLAST of mRNA_P-wetherbeei_contig6030.1.1 vs. uniprot
Match: A0A6H5K7P8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7P8_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 5.980e-35
Identity = 79/177 (44.63%), Postives = 104/177 (58.76%), Query Frame = 0
Query:    1 HASVICLGLISCGLRDGPGADLLCAVVAAHGSRRDSKTWAVGLRKRFSYETN-AAAAPRGVAVMGCLIIDASENRLGDAGACAIARALETDSWLVGLSLAKNSIGRRGVGCLEAALVQNASLCALVLDGNPGVAAAEERRFLVALERRTL-PAVVSHEPLVGLRLCGWGFVAEDSFE 175
            H S++ L L  CGL       L+ +V+ AH +RR+   W+ GLR+      + AAAAP  ++  GCL +D S+NRLGD G  A+AR L++D+WLVG++LA+N I   G   L   L  NA+LCALVLDGNP V    ERR    LE R++ P  V  EP V L L  WGF A    +
Sbjct:  263 HPSLVALSLRGCGLVGEASGRLVASVLRAHAARREGLVWSSGLRRPTGVVGHTAAAAPARISTAGCLAVDLSDNRLGDTGVHAVARGLQSDTWLVGVNLARNGITDHGAALLSVCLQHNATLCALVLDGNPEVGHGAERRITEELETRSMMPEAVLEEPEVVLTLASWGFSAHTGVD 439          
BLAST of mRNA_P-wetherbeei_contig6030.1.1 vs. uniprot
Match: A0A835YYM4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYM4_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.370e-25
Identity = 63/169 (37.28%), Postives = 88/169 (52.07%), Query Frame = 0
Query:    1 HASVICLGLISCGLRDGPGADLLCAVVAAHGSRRDSKTWAVGLRKRFSYETNAAAAPRGVAVMGCLIIDASENRLGDAGACAIARALETDSWLVGLSLAKNSIGRRGVGCLEAALVQNASLCALVLDGNPGVAAAEERRFLVALERRTLPAVVSHEPLVGLRLCGWGFV 169
            H  +  L L +C +R   GA ++ AV+ AH +RRD  +W+ GLR+        +AAP  +A  G L +D S NRLGDAGA  +ARAL  D+WLV LSLA   +       L+  L  N  LC ++L+ NP ++ A        L  R +P     +  V   L  WGF+
Sbjct:  246 HPRIAALALPNCNVRGADGARIVGAVIRAHSNRRDGLSWSAGLRRARPRGAATSAAPAALARAGLLSLDVSRNRLGDAGAAELARALRGDAWLVALSLAATGLSDDAAAALQECLSVNQELCLVLLEHNPRLSPAAIAALDATLHERIVPRAAVEDAAVAATLDSWGFI 414          
BLAST of mRNA_P-wetherbeei_contig6030.1.1 vs. uniprot
Match: K3W6K8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6K8_GLOUD)

HSP 1 Score: 63.2 bits (152), Expect = 1.640e-8
Identity = 45/121 (37.19%), Postives = 63/121 (52.07%), Query Frame = 0
Query:    7 LGLISCGLRDGPGADLLCAVVAAHGSRRDSKTWAVGLRKRFSYETNAAAAPRGVAVMGCLIIDASENRLGDAGACAIARALETDSWLVGLSLAKNSIGRRGVGCLEAALVQ-NASLCALVL 126
            L L  C L D   +D +  ++  HG  +D   W+  LR     E+ +A A R       L++D S+N LGD  A A+  AL  D WL+GL+L +N I R G+  L   L Q N +L ALV+
Sbjct:   43 LNLTGCHLTD-KASDHISKIITLHGVLKDEDVWSSSLRG----ESVSAVASR-----PALLLDLSQNALGDESAQALCNALYHDKWLLGLNLGQNRISRNGITLLIDTLTQSNRTLAALVV 153          
BLAST of mRNA_P-wetherbeei_contig6030.1.1 vs. uniprot
Match: A0A5D6XZA1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZA1_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.270e-7
Identity = 43/120 (35.83%), Postives = 60/120 (50.00%), Query Frame = 0
Query:    7 LGLISCGLRDGPGADLLCAVVAAHGSRRDSKTWAVGLRKRFSYETNAAAAPRGVAVMGCLIIDASENRLGDAGACAIARALETDSWLVGLSLAKNSIGRRGVGCLEAALVQNASLCALVL 126
            L L  C L +    D +  ++  HG+ +D   W+  LR     E    AA R       L++D S+N LGD  A AI  AL  D WL+GL+L++N + R GV  L   L Q+    A+VL
Sbjct:  243 LSLAGCRLTN-KARDHIAKIITLHGTLKDESVWSSSLRG----EAAGVAATR-----PSLLLDLSQNALGDDAAEAICNALYHDKWLLGLNLSQNRVSRSGVARLTETLSQSNRTLAVVL 352          
BLAST of mRNA_P-wetherbeei_contig6030.1.1 vs. uniprot
Match: A0A1V9YYF4_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YYF4_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 1.380e-7
Identity = 44/123 (35.77%), Postives = 65/123 (52.85%), Query Frame = 0
Query:    7 LGLISCGLRDGPGADLLCAVVAAHGSRRDSKTWAVGLRKRFSYETNAAAAPRGVAVMGCLIIDASENRLGDAGACAIARALETDSWLVGLSLAKNSIGRRGVGCLEAALVQNASLCALVLDGN 129
            L L +C L D   A  +  ++     RRD   W+  LR +          P  V   GC++++ S+N+LGDA    + +AL  D+WL GL+L +N IG RGV  L  AL  N++L  L+L+ N
Sbjct:  532 LNLTNCLLNDA-SARAISRILRVQCQRRDEVYWSSTLRGQI--------IP--VQGEGCMLLNLSKNKLGDATTEILCQALYNDNWLYGLNLNENDIGPRGVLNLAEALQTNSTLTVLLLEDN 643          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6030.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LBL5_ECTSI2.340e-3544.63Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5K7P8_9PHAE5.980e-3544.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YYM4_9STRA1.370e-2537.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K3W6K8_GLOUD1.640e-837.19Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A5D6XZA1_9STRA1.270e-735.83Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1V9YYF4_9STRA1.380e-735.77Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 66..150
e-value: 3.4E-12
score: 48.1
NoneNo IPR availablePANTHERPTHR24110CENTROSOMAL PROTEIN OF 78 KDAcoord: 7..132
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 68..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6030contigP-wetherbeei_contig6030:5..580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6030.1.1mRNA_P-wetherbeei_contig6030.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6030 5..580 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6030.1.1 ID=prot_P-wetherbeei_contig6030.1.1|Name=mRNA_P-wetherbeei_contig6030.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=192bp
HASVICLGLISCGLRDGPGADLLCAVVAAHGSRRDSKTWAVGLRKRFSYE
TNAAAAPRGVAVMGCLIIDASENRLGDAGACAIARALETDSWLVGLSLAK
NSIGRRGVGCLEAALVQNASLCALVLDGNPGVAAAEERRFLVALERRTLP
AVVSHEPLVGLRLCGWGFVAEDSFEATGDDGAAAGDGAVAAD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf