prot_P-wetherbeei_contig6002.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6002.3.1
Unique Nameprot_P-wetherbeei_contig6002.3.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length90
Homology
BLAST of mRNA_P-wetherbeei_contig6002.3.1 vs. uniprot
Match: W7TAL4_9STRA (Putative polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TAL4_9STRA)

HSP 1 Score: 102 bits (254), Expect = 4.380e-25
Identity = 54/90 (60.00%), Postives = 69/90 (76.67%), Query Frame = 0
Query:    1 MAACSATQEAIYLRCLLESLGHPQTNPTIIHEDNQAAIALAHTAIEQWHPRTRHMHVRYKFVKERVRSHEVELVYVHTSNQLADLLTKNL 90
            ++ACSATQ AIY+R LL  LG  Q  PT+I EDNQA IA+++  I+  H RT+H+HVRY FV+E+V S EVELVY+ T +QLAD+LTK L
Sbjct:  121 ISACSATQTAIYIRQLLMDLGSKQDEPTMIMEDNQACIAMSNNPIK--HKRTKHIHVRYHFVREKVESKEVELVYIPTQHQLADILTKPL 208          
BLAST of mRNA_P-wetherbeei_contig6002.3.1 vs. uniprot
Match: W7SYU7_9STRA (Putative polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7SYU7_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.420e-23
Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 MAACSATQEAIYLRCLLESLGHPQTNPTIIHEDNQAAIALAHTAIEQWHPRTRHMHVRYKFVKERVRSHEVELVYVHTSNQLADLLTKNL 90
            ++ACSATQ A+Y+R LL  LG  Q  PT+I EDNQA IA+ +  I   H RT+H+ VRY FV+E+V S EVELVY+ T +QLAD+LTK L
Sbjct:   33 ISACSATQSAVYIRQLLTDLGFKQDEPTVIMEDNQACIAMGNNPIT--HKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPL 120          
BLAST of mRNA_P-wetherbeei_contig6002.3.1 vs. uniprot
Match: W7U3E4_9STRA (Copia-type polyprotein (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3E4_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.880e-23
Identity = 50/90 (55.56%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 MAACSATQEAIYLRCLLESLGHPQTNPTIIHEDNQAAIALAHTAIEQWHPRTRHMHVRYKFVKERVRSHEVELVYVHTSNQLADLLTKNL 90
            ++ACSATQ A+Y+R LL  LG  Q  PT+I EDNQA IA+++  I   H RT+H+ +RY FV+E+  S EVELVY+ T +QLAD+LTK L
Sbjct:  108 ISACSATQSAVYIRQLLTDLGFKQDEPTVIMEDNQACIAMSNNPIT--HKRTKHIDIRYHFVREKAESKEVELVYIPTQHQLADILTKPL 195          
BLAST of mRNA_P-wetherbeei_contig6002.3.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA)

HSP 1 Score: 100 bits (248), Expect = 1.330e-22
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 0
Query:    1 MAACSATQEAIYLRCLLESLGHPQTNPTIIHEDNQAAIALAHTAIEQWHPRTRHMHVRYKFVKERVRSHEVELVYVHTSNQLADLLTKNL 90
            ++ACSATQ A+Y+R LL  LG  Q  PT+I EDNQA IA+ +  I   H RT+H+ VRY FV+E+V S EVELVY+ T +QLAD+LTK+L
Sbjct:  907 ISACSATQSAVYIRQLLTDLGFKQDEPTVIMEDNQACIAMGNNPIT--HKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKSL 994          
BLAST of mRNA_P-wetherbeei_contig6002.3.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 4.530e-22
Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 MAACSATQEAIYLRCLLESLGHPQTNPTIIHEDNQAAIALAHTAIEQWHPRTRHMHVRYKFVKERVRSHEVELVYVHTSNQLADLLTKNL 90
            ++ACSATQ A+Y+R LL  LG  Q  PT+I EDNQA IA+ +  I   H RT+H+ VRY FV+E+V S EVELVY+ T +QLAD+LTK L
Sbjct:  609 ISACSATQNAVYIRQLLMDLGFKQDEPTVIMEDNQACIAMGNNPIT--HKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPL 696          
BLAST of mRNA_P-wetherbeei_contig6002.3.1 vs. uniprot
Match: W7T0D1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0D1_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.150e-21
Identity = 52/90 (57.78%), Postives = 67/90 (74.44%), Query Frame = 0
Query:    1 MAACSATQEAIYLRCLLESLGHPQTNPTIIHEDNQAAIALAHTAIEQWHPRTRHMHVRYKFVKERVRSHEVELVYVHTSNQLADLLTKNL 90
            ++ACSATQ A+Y+R LL  LG  Q  PT+I EDNQA IA+++  I Q   RT+H+ VRY FV+E+V S EVELVY+ T +QLAD+LTK L
Sbjct:  610 ISACSATQSAVYIRQLLMDLGFKQDEPTVIMEDNQACIAMSNNPIIQ--KRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPL 697          
BLAST of mRNA_P-wetherbeei_contig6002.3.1 vs. uniprot
Match: W7TIM1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIM1_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.170e-21
Identity = 51/90 (56.67%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 MAACSATQEAIYLRCLLESLGHPQTNPTIIHEDNQAAIALAHTAIEQWHPRTRHMHVRYKFVKERVRSHEVELVYVHTSNQLADLLTKNL 90
            ++ACSATQ A+Y+R LL  LG  Q  PT+I EDNQA IA+ +  I   H +T+H+ VRY FV+E+V S EVELVY+ T +QLAD+LTK L
Sbjct:  618 ISACSATQSAVYIRQLLTDLGFKQDEPTVIVEDNQACIAMGNNPIT--HKKTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTKPL 705          
BLAST of mRNA_P-wetherbeei_contig6002.3.1 vs. uniprot
Match: W7TF74_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TF74_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 2.160e-21
Identity = 50/90 (55.56%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 MAACSATQEAIYLRCLLESLGHPQTNPTIIHEDNQAAIALAHTAIEQWHPRTRHMHVRYKFVKERVRSHEVELVYVHTSNQLADLLTKNL 90
            ++ACSATQ A+Y+R LL  LG  Q  PT+I EDNQA IA+++  I   H RT+H+ VR+ FV+ +V S EVELVY+ T +QLAD+LTK L
Sbjct:  204 ISACSATQSAVYIRQLLMDLGFKQDKPTVIMEDNQACIAMSNNPIT--HKRTKHIDVRFHFVRGKVESKEVELVYIPTQHQLADILTKPL 291          
BLAST of mRNA_P-wetherbeei_contig6002.3.1 vs. uniprot
Match: W7T201_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T201_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 2.280e-21
Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 MAACSATQEAIYLRCLLESLGHPQTNPTIIHEDNQAAIALAHTAIEQWHPRTRHMHVRYKFVKERVRSHEVELVYVHTSNQLADLLTKNL 90
            ++ACSATQ A+Y+R LL  LG  Q  PT+I EDNQA IA+++  I Q   RT+H+ VRY FV+E V S EVELVY+ T +QLAD+LTK L
Sbjct:  288 ISACSATQSAVYIRQLLMDLGFKQGEPTVIMEDNQACIAMSNNQIIQ--KRTKHIDVRYHFVREEVESKEVELVYIPTQHQLADILTKPL 375          
BLAST of mRNA_P-wetherbeei_contig6002.3.1 vs. uniprot
Match: W7T0T3_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0T3_9STRA)

HSP 1 Score: 93.2 bits (230), Expect = 3.580e-20
Identity = 49/90 (54.44%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 MAACSATQEAIYLRCLLESLGHPQTNPTIIHEDNQAAIALAHTAIEQWHPRTRHMHVRYKFVKERVRSHEVELVYVHTSNQLADLLTKNL 90
            ++ACSATQ A+Y+R LL  LG  Q   T+I E+NQA IA+++  I   H RT+H+ VRY FV+++V S EVELVY+ T +QLAD+LTK L
Sbjct:  810 ISACSATQSAVYIRQLLTDLGFKQDEATVIMENNQACIAMSNNPIT--HKRTKHIDVRYHFVRDKVESKEVELVYIPTQHQLADILTKPL 897          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6002.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
W7TAL4_9STRA4.380e-2560.00Putative polyprotein n=1 Tax=Nannochloropsis gadit... [more]
W7SYU7_9STRA1.420e-2357.78Putative polyprotein n=1 Tax=Nannochloropsis gadit... [more]
W7U3E4_9STRA2.880e-2355.56Copia-type polyprotein (Fragment) n=1 Tax=Nannochl... [more]
W7T174_9STRA1.330e-2257.78Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
W7TJ26_9STRA4.530e-2257.78Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]
W7T0D1_9STRA1.150e-2157.78Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
W7TIM1_9STRA1.170e-2156.67Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
W7TF74_9STRA2.160e-2155.56Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
W7T201_9STRA2.280e-2157.78Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
W7T0T3_9STRA3.580e-2054.44Gag-pol polyprotein n=2 Tax=Nannochloropsis gadita... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 1..90
e-value: 1.34945E-36
score: 118.34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6002contigP-wetherbeei_contig6002:2248..2517 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6002.3.1mRNA_P-wetherbeei_contig6002.3.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6002 2218..2517 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6002.3.1 ID=prot_P-wetherbeei_contig6002.3.1|Name=mRNA_P-wetherbeei_contig6002.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=90bp
MAACSATQEAIYLRCLLESLGHPQTNPTIIHEDNQAAIALAHTAIEQWHP
RTRHMHVRYKFVKERVRSHEVELVYVHTSNQLADLLTKNL
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