prot_P-wetherbeei_contig60.6.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig60.6.1
Unique Nameprot_P-wetherbeei_contig60.6.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length185
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig60.6.1 vs. uniprot
Match: A0A835ZCA7_9STRA (SAM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCA7_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 5.000e-11
Identity = 36/66 (54.55%), Postives = 48/66 (72.73%), Query Frame = 0 
Query:   35 VDVDEFLDAIGLPQYRQCLLLNLGFSDGTGNLSKQKLAQLQMQQLPQMNISQFDHEKRIMARMRQL 100
            +DV  FL   GL QYR+C + NL   DG G LS++KLAQ+QM  LP MNI++ DH+K IMAR+++L
Sbjct:    6 IDVRTFLKPTGLEQYRECFMTNLWGGDGRG-LSRRKLAQVQMHHLPDMNITRHDHQKIIMARLKEL 70
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig60.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZCA7_9STRA5.000e-1154.55SAM domain-containing protein n=1 Tax=Tribonema mi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013761Sterile alpha motif/pointed domain superfamilyGENE3D1.10.150.50coord: 34..101
e-value: 8.2E-9
score: 37.5
IPR013761Sterile alpha motif/pointed domain superfamilySUPERFAMILY47769SAM/Pointed domaincoord: 32..104
IPR001660Sterile alpha motif domainPFAMPF00536SAM_1coord: 36..100
e-value: 1.7E-6
score: 28.4
IPR001660Sterile alpha motif domainPROSITEPS50105SAM_DOMAINcoord: 36..103
score: 10.995757
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 102..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig60contigP-wetherbeei_contig60:11204..11864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig60.6.1mRNA_P-wetherbeei_contig60.6.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig60 11204..11864 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig60.6.1 ID=prot_P-wetherbeei_contig60.6.1|Name=mRNA_P-wetherbeei_contig60.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=185bp
NQPSHKVHRKANTAKRRNNSKSVARAPMVKNSGTVDVDEFLDAIGLPQYR
QCLLLNLGFSDGTGNLSKQKLAQLQMQQLPQMNISQFDHEKRIMARMRQL
LFPEGTSPPPQDPIDDAHNLNANGTAESSLSSESGLVHAERGSHDAITRK
NDGSSCGAAGAPPERHSSGGGGNGGHAKHSIGTGG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013761SAM/pointed_sf
IPR001660SAM