prot_P-wetherbeei_contig5940.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5940.1.1
Unique Nameprot_P-wetherbeei_contig5940.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length482
Homology
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BLAST of mRNA_P-wetherbeei_contig5940.1.1 vs. uniprot
Match: A0A7S4E0R0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4E0R0_9EUKA)

HSP 1 Score: 77.0 bits (188), Expect = 1.550e-12
Identity = 47/149 (31.54%), Postives = 70/149 (46.98%), Query Frame = 0 
Query:   53 VDPHSHDGYKCAICHAELVNAYLHCSGCEVLLRRDFNVCLRCHTAGAKNFTATVAAANAGGSIMVVPWSNAWVPNFTNFKHLTFETAHTREQRREAIRYELHNKS-EKCPCSQRKCAVCKLCSSCACDCHAAFQPRYRFQNGCGMRALA 200
            VDP+  +G++C IC  EL N Y+HC GCE +LRRD+N+C  CH              N G                  F+    +++H         R ++  ++  KC C Q +C  C+ C  C+C CH  FQ R+RF +   ++ LA
Sbjct:   84 VDPNGVEGFECKICKTELYNMYMHCIGCERILRRDWNICYDCHK-------------NQG------------------FRRNDAKSSH------HGHRGDVDPQAASKCRCRQFQCTYCRGCVRCSCRCHTDFQQRFRFLSPSQLKQLA 195
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5940.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S4E0R0_9EUKA1.550e-1231.54Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 268..346
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 462..482
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 55..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5940contigP-wetherbeei_contig5940:273..1718 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5940.1.1mRNA_P-wetherbeei_contig5940.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5940 273..1718 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5940.1.1 ID=prot_P-wetherbeei_contig5940.1.1|Name=mRNA_P-wetherbeei_contig5940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=482bp
MGPAADGGQALVAATQGRVATAAAAAAAAAAAAAAARSPSLGIVDADQAN
SPVDPHSHDGYKCAICHAELVNAYLHCSGCEVLLRRDFNVCLRCHTAGAK
NFTATVAAANAGGSIMVVPWSNAWVPNFTNFKHLTFETAHTREQRREAIR
YELHNKSEKCPCSQRKCAVCKLCSSCACDCHAAFQPRYRFQNGCGMRALA
MRATAAAAAAAVAAEGLAGSAAAAAAMAAADKAAANLATEPDVGYLVPAA
AAANGIAAWVASQGAAAEGKNSGHRSSRGGGGGGGDSGKGRGRGGGGNGR
NSTARGRGRGRGGAGRGDALDGVEPATDGAVAAAVPAARRRGRPPMMRPV
EEIPAVAKATSAEAVAKAAAAEDATAVEVAAATAATGSNRPASGDGAAPR
DDGSGTPRDCLRRANSGTGAQSANGGKEATALPSAATDRPRRNASKRAEA
VAGGEGSSDESDGDVIADRRNRATKKHSRDET
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