prot_P-wetherbeei_contig59282.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig59282.1.1
Unique Nameprot_P-wetherbeei_contig59282.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length161
Homology
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BLAST of mRNA_P-wetherbeei_contig59282.1.1 vs. uniprot
Match: A0A7Z2SRU7_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobium sp. CCBAU 051011 TaxID=858422 RepID=A0A7Z2SRU7_9BRAD)

HSP 1 Score: 52.8 bits (125), Expect = 4.570e-5
Identity = 51/158 (32.28%), Postives = 80/158 (50.63%), Query Frame = 0 
Query:    5 LSARRTLVFSLLLFIPLAIFASALVRFTFVALVAALVVGACSSSAWRRKNVLIVIAAIALSVAAGFVSRPQHIARYASYAIGGGQTDPQAPASTANEAPATSXXXXXXXXXXXXXXXAPAQKLEQGAKLQYLA-PSCTTETNVNLQNSIAIRRVLLLD 161
            L+ RR +V + LLF+P+AIFA+A+VRF FVA+V AL++ A  SS  +R  + I+IA +      G ++R        +YA        +   ST  +  A++                  QK  Q   ++ +  PSC  + ++N  NS+AIR+ LL D
Sbjct:  169 LTPRRRVVLTALLFLPVAIFAAAMVRFYFVAIVVALLLAAVLSSGRQRVYIAIIIATVLAGSTVGLLARFDTAKVLMTYAT------QETEISTIQKTVASTQ-----------------QKHNQTEMVEKIVLPSCNLDLDLN--NSVAIRKALLRD 301
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59282.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7Z2SRU7_9BRAD4.570e-532.28Uncharacterized protein n=2 Tax=Bradyrhizobium sp.... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..121
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59282contigP-wetherbeei_contig59282:2..484 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59282.1.1mRNA_P-wetherbeei_contig59282.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig59282 2..487 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig59282.1.1 ID=prot_P-wetherbeei_contig59282.1.1|Name=mRNA_P-wetherbeei_contig59282.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=161bp
MMRQLSARRTLVFSLLLFIPLAIFASALVRFTFVALVAALVVGACSSSAW
RRKNVLIVIAAIALSVAAGFVSRPQHIARYASYAIGGGQTDPQAPASTAN
EAPATSNANQAPAAPRADSASAPAQKLEQGAKLQYLAPSCTTETNVNLQN
SIAIRRVLLLD
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