prot_P-wetherbeei_contig59280.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig59280.1.1
Unique Nameprot_P-wetherbeei_contig59280.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length124
Homology
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BLAST of mRNA_P-wetherbeei_contig59280.1.1 vs. uniprot
Match: A0A7Y4W0A1_9GAMM (TonB-dependent receptor n=1 Tax=Methylococcaceae bacterium TaxID=1933926 RepID=A0A7Y4W0A1_9GAMM)

HSP 1 Score: 79.3 bits (194), Expect = 9.570e-15
Identity = 42/105 (40.00%), Postives = 60/105 (57.14%), Query Frame = 0 
Query:    2 WERFERPIGASDEGFTLVDTWFAPLCLRTFWPNGLSASATVTYVKQRGTFFDVFLTNIYDGRSEFAIADFLIRYQMPRRQGAIAIGVRNAFNQHFLFQSTDRVGS 106
            +ERF+R     + G   V T + PL L  F  +G S     TYV Q G FF+ F   IY G S F + D  + Y++P R G +++GV+N FN HF +QST+++ S
Sbjct:  988 YERFDRKANPLNTGIVDVKTHWIPLTLNIFHASGASMMLKSTYVNQYG-FFEKF-GEIYPGNSNFFVFDVNLNYRLPSRYGMVSLGVKNLFNNHFQYQSTNQINS 1090
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59280.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7Y4W0A1_9GAMM9.570e-1540.00TonB-dependent receptor n=1 Tax=Methylococcaceae b... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59280contigP-wetherbeei_contig59280:5..376 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59280.1.1mRNA_P-wetherbeei_contig59280.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig59280 5..376 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig59280.1.1 ID=prot_P-wetherbeei_contig59280.1.1|Name=mRNA_P-wetherbeei_contig59280.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=124bp
RWERFERPIGASDEGFTLVDTWFAPLCLRTFWPNGLSASATVTYVKQRGT
FFDVFLTNIYDGRSEFAIADFLIRYQMPRRQGAIAIGVRNAFNQHFLFQS
TDRVGSPIEMGRFGFASFELFFH*
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