prot_P-wetherbeei_contig59269.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig59269.1.1
Unique Nameprot_P-wetherbeei_contig59269.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length52
Homology
BLAST of mRNA_P-wetherbeei_contig59269.1.1 vs. uniprot
Match: UPI00159BE0F9 (CoA transferase n=1 Tax=Escherichia coli TaxID=562 RepID=UPI00159BE0F9)

HSP 1 Score: 100 bits (248), Expect = 1.490e-26
Identity = 43/52 (82.69%), Postives = 50/52 (96.15%), Query Frame = 0
Query:    1 MTSQSAFGALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETREW 52
            MTSQ+A GA+AGLRVIDLTRVLGGPYCTQIL DHGA+++K+EPPAGDETR+W
Sbjct:    1 MTSQTATGAMAGLRVIDLTRVLGGPYCTQILADHGADVVKVEPPAGDETRDW 52          
BLAST of mRNA_P-wetherbeei_contig59269.1.1 vs. uniprot
Match: W3RNB2_9BRAD (Carnitine dehydratase n=2 Tax=Afipia sp. P52-10 TaxID=1429916 RepID=W3RNB2_9BRAD)

HSP 1 Score: 105 bits (263), Expect = 8.090e-26
Identity = 49/52 (94.23%), Postives = 50/52 (96.15%), Query Frame = 0
Query:    1 MTSQSAFGALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETREW 52
            M +QSA GALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETREW
Sbjct:    1 MMTQSALGALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETREW 52          
BLAST of mRNA_P-wetherbeei_contig59269.1.1 vs. uniprot
Match: UPI001BC3CFB8 (CoA transferase n=1 Tax=Afipia sp. TaxID=1871052 RepID=UPI001BC3CFB8)

HSP 1 Score: 98.6 bits (244), Expect = 6.310e-24
Identity = 42/52 (80.77%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    1 MTSQSAFGALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETREW 52
            MTSQ A GA+AGLRV+DLTRVLGGPYCTQIL DHGA+++K+EPPAGDETR+W
Sbjct:    1 MTSQIATGAMAGLRVVDLTRVLGGPYCTQILADHGADVVKVEPPAGDETRDW 52          
BLAST of mRNA_P-wetherbeei_contig59269.1.1 vs. uniprot
Match: A0A4V6BG11_9BRAD (CoA transferase n=11 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A4V6BG11_9BRAD)

HSP 1 Score: 99.8 bits (247), Expect = 1.540e-23
Identity = 42/52 (80.77%), Postives = 50/52 (96.15%), Query Frame = 0
Query:    1 MTSQSAFGALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETREW 52
            MTSQ+A GA+AGLRV+DLTRVLGGPYCTQIL DHGA+++K+EPPAGDETR+W
Sbjct:    1 MTSQTATGAMAGLRVVDLTRVLGGPYCTQILADHGADVVKVEPPAGDETRDW 52          
BLAST of mRNA_P-wetherbeei_contig59269.1.1 vs. uniprot
Match: A0A0Q6Z6S9_9BRAD (Carnitine dehydratase n=1 Tax=Afipia sp. Root123D2 TaxID=1736436 RepID=A0A0Q6Z6S9_9BRAD)

HSP 1 Score: 97.8 bits (242), Expect = 7.940e-23
Identity = 42/52 (80.77%), Postives = 50/52 (96.15%), Query Frame = 0
Query:    1 MTSQSAFGALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETREW 52
            MT+Q+A GA+AGLRVIDL+RVLGGPYCTQIL DHGA+I+K+EPPAGDETR+W
Sbjct:    1 MTTQAAAGAMAGLRVIDLSRVLGGPYCTQILADHGADIVKVEPPAGDETRDW 52          
BLAST of mRNA_P-wetherbeei_contig59269.1.1 vs. uniprot
Match: A0A1E8CGN7_9GAMM (Carnitine dehydratase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1E8CGN7_9GAMM)

HSP 1 Score: 97.1 bits (240), Expect = 1.520e-22
Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 MTSQSAFGALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETREW 52
            MT QS+ GAL GLRVIDLTRVLGGPYCTQ+LGDHGAEI+K+EPP GDE R+W
Sbjct:    1 MTEQSSNGALEGLRVIDLTRVLGGPYCTQVLGDHGAEIVKIEPPQGDEVRDW 52          
BLAST of mRNA_P-wetherbeei_contig59269.1.1 vs. uniprot
Match: UPI001C247B64 (CoA transferase n=1 Tax=Nocardia sp. ncl2 TaxID=2815723 RepID=UPI001C247B64)

HSP 1 Score: 89.4 bits (220), Expect = 3.660e-22
Identity = 36/52 (69.23%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 MTSQSAFGALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETREW 52
            MT ++A GALAG+RV+DL+R+LGGPYC QILGDHGA+++K+EPP GD+TR W
Sbjct:    1 MTDRAATGALAGIRVLDLSRILGGPYCGQILGDHGADVLKVEPPEGDDTRTW 52          
BLAST of mRNA_P-wetherbeei_contig59269.1.1 vs. uniprot
Match: UPI001BAC8D87 (CoA transferase n=1 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001BAC8D87)

HSP 1 Score: 95.5 bits (236), Expect = 5.650e-22
Identity = 43/52 (82.69%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    1 MTSQSAFGALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETREW 52
            MTSQ+A GA+AGLRVIDLTRVLGGPYCTQ+L DHGA++IK+EPPAGDE REW
Sbjct:    1 MTSQAA-GAMAGLRVIDLTRVLGGPYCTQVLADHGADVIKVEPPAGDEVREW 51          
BLAST of mRNA_P-wetherbeei_contig59269.1.1 vs. uniprot
Match: A0A8J3E2X8_9PROT (CoA transferase n=1 Tax=Aliidongia dinghuensis TaxID=1867774 RepID=A0A8J3E2X8_9PROT)

HSP 1 Score: 95.1 bits (235), Expect = 7.960e-22
Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 0
Query:    1 MTSQSAFGALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETREW 52
            MT Q   GALAG+RV+DLTRVLGGPYCTQILGDHGAEIIK+EPP GDETR W
Sbjct:    1 MTIQPHPGALAGIRVVDLTRVLGGPYCTQILGDHGAEIIKIEPPTGDETRGW 52          
BLAST of mRNA_P-wetherbeei_contig59269.1.1 vs. uniprot
Match: A4YJJ8_BRASO (Putative caiB/baiF CoA-transferase family protein Putative Formyl-CoA transferase n=10 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A4YJJ8_BRASO)

HSP 1 Score: 94.7 bits (234), Expect = 1.080e-21
Identity = 42/52 (80.77%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 MTSQSAFGALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETREW 52
            MT Q A GA+AGLRVIDLTRVLGGPYCTQIL DHGA++IK+EPPAGDE R+W
Sbjct:    1 MTPQFAPGAMAGLRVIDLTRVLGGPYCTQILADHGADVIKVEPPAGDEVRDW 52          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59269.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00159BE0F91.490e-2682.69CoA transferase n=1 Tax=Escherichia coli TaxID=562... [more]
W3RNB2_9BRAD8.090e-2694.23Carnitine dehydratase n=2 Tax=Afipia sp. P52-10 Ta... [more]
UPI001BC3CFB86.310e-2480.77CoA transferase n=1 Tax=Afipia sp. TaxID=1871052 R... [more]
A0A4V6BG11_9BRAD1.540e-2380.77CoA transferase n=11 Tax=Bradyrhizobiaceae TaxID=4... [more]
A0A0Q6Z6S9_9BRAD7.940e-2380.77Carnitine dehydratase n=1 Tax=Afipia sp. Root123D2... [more]
A0A1E8CGN7_9GAMM1.520e-2280.77Carnitine dehydratase n=2 Tax=Gammaproteobacteria ... [more]
UPI001C247B643.660e-2269.23CoA transferase n=1 Tax=Nocardia sp. ncl2 TaxID=28... [more]
UPI001BAC8D875.650e-2282.69CoA transferase n=1 Tax=unclassified Bradyrhizobiu... [more]
A0A8J3E2X8_9PROT7.960e-2282.69CoA transferase n=1 Tax=Aliidongia dinghuensis Tax... [more]
A4YJJ8_BRASO1.080e-2180.77Putative caiB/baiF CoA-transferase family protein ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003673CoA-transferase family IIIPFAMPF02515CoA_transf_3coord: 10..52
e-value: 2.8E-17
score: 62.9
IPR023606CoA-transferase family III domain 1 superfamilyGENE3D3.40.50.10540coord: 3..52
e-value: 1.5E-18
score: 68.9
IPR023606CoA-transferase family III domain 1 superfamilySUPERFAMILY89796CoA-transferase family III (CaiB/BaiF)coord: 7..52
NoneNo IPR availablePANTHERPTHR48207SUCCINATE--HYDROXYMETHYLGLUTARATE COA-TRANSFERASEcoord: 4..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59269contigP-wetherbeei_contig59269:208..363 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59269.1.1mRNA_P-wetherbeei_contig59269.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig59269 208..363 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig59269.1.1 ID=prot_P-wetherbeei_contig59269.1.1|Name=mRNA_P-wetherbeei_contig59269.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=52bp
MTSQSAFGALAGLRVIDLTRVLGGPYCTQILGDHGAEIIKLEPPAGDETR
EW
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003673CoA-Trfase_fam_III
IPR023606CoA-Trfase_III_dom_1_sf