prot_P-wetherbeei_contig59223.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig59223.1.1
Unique Nameprot_P-wetherbeei_contig59223.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length74
Homology
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BLAST of mRNA_P-wetherbeei_contig59223.1.1 vs. uniprot
Match: UPI001C3C60AE (PDZ domain-containing protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3C60AE)

HSP 1 Score: 96.7 bits (239), Expect = 7.590e-22
Identity = 47/70 (67.14%), Postives = 60/70 (85.71%), Query Frame = 0 
Query:    4 DRTPEALAAAQRAVGLDARYADAFLPLGISLIASGDRPGGVKALRRGLVLLEEPDRANDLIAKNLDPTDP 73
            DR  +A+  AQ+AV LD RYAD FLPLGI+L+A+GD+P GV+ LRRGL+LLEEPDRA+ LI+++LDPTDP
Sbjct:  384 DRAADAVTEAQKAVRLDPRYADGFLPLGIALLATGDKPNGVRFLRRGLLLLEEPDRASRLISEHLDPTDP 453
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BLAST of mRNA_P-wetherbeei_contig59223.1.1 vs. uniprot
Match: UPI001C3D2962 (S1C family serine protease n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D2962)

HSP 1 Score: 87.8 bits (216), Expect = 1.190e-18
Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 0 
Query:    1 LNADRTPEALAAAQRAVGLDARYADAFLPLGISLIASGDRPGGVKALRRGLVLLEEPDRANDLIAKNLDPTDP 73
            L  DR P+A+AAA RAV LD RYADAFLPLG++L+A G +  GV+ LRRGL+LLE+ +RA  L  ++LDPTDP
Sbjct:  381 LREDRVPDAVAAASRAVRLDNRYADAFLPLGMALLADGQKAQGVRMLRRGLLLLEDAERAARLTTEHLDPTDP 453
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig59223.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI001C3C60AE7.590e-2267.14PDZ domain-containing protein n=1 Tax=Miltoncostae... [more]
UPI001C3D29621.190e-1861.64S1C family serine protease n=1 Tax=Miltoncostaea m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1..70
e-value: 5.4E-6
score: 28.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 3..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig59223contigP-wetherbeei_contig59223:237..458 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig59223.1.1mRNA_P-wetherbeei_contig59223.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig59223 237..458 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig59223.1.1 ID=prot_P-wetherbeei_contig59223.1.1|Name=mRNA_P-wetherbeei_contig59223.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=74bp
LNADRTPEALAAAQRAVGLDARYADAFLPLGISLIASGDRPGGVKALRRG
LVLLEEPDRANDLIAKNLDPTDP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf