prot_P-wetherbeei_contig59011.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig59011.1.1
Unique Name	prot_P-wetherbeei_contig59011.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	109

Homology

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BLAST of mRNA_P-wetherbeei_contig59011.1.1 vs. uniprot
Match: UPI001C21F17F (PadR family transcriptional regulator n=2 Tax=Reyranella TaxID=445219 RepID=UPI001C21F17F)

HSP 1 Score: 174 bits (442), Expect = 1.710e-53
Identity = 91/108 (84.26%), Postives = 100/108 (92.59%), Query Frame = 0

Query:    1 MVYPTLTMLDEMGHVAEVKSEGARKAFAVTAEGTAHLAERQAEVEALFARLAELATVSDRTDAMPVRRAMGNLRAVLIHRLGRDGVQKQTVHEAVAIIDEAAQRIERL 108
            MVYPTLTMLDEMGHVAEVKS+GARKAF VT +GT HL ER+AEV+ALFARLAELA++ +RTDA PVRRAM NLR VLIHRLGR+GVQKQTVH+AVAIIDEAAQRIERL
Sbjct:   90 MVYPTLTMLDEMGHVAEVKSDGARKAFTVTPDGTIHLLERKAEVDALFARLAELASLQERTDAAPVRRAMNNLREVLIHRLGREGVQKQTVHDAVAIIDEAAQRIERL 197

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BLAST of mRNA_P-wetherbeei_contig59011.1.1 vs. uniprot
Match: A0A6N6ZYD3_9PROT (PadR domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N6ZYD3_9PROT)

HSP 1 Score: 171 bits (433), Expect = 3.990e-52
Identity = 87/108 (80.56%), Postives = 98/108 (90.74%), Query Frame = 0

Query:    1 MVYPTLTMLDEMGHVAEVKSEGARKAFAVTAEGTAHLAERQAEVEALFARLAELATVSDRTDAMPVRRAMGNLRAVLIHRLGRDGVQKQTVHEAVAIIDEAAQRIERL 108
            MVYPTLT+LDEMGH+AE KSEG+RKAFA+T +GT HL ER+ EV+ALFARLAELA V +RTD+ PVRRAMGNLR  LI+RLGRDGVQKQTVH+AVAIIDEAAQRIERL
Sbjct:   90 MVYPTLTLLDEMGHIAETKSEGSRKAFAITPDGTVHLTERKGEVDALFARLAELANVQERTDSAPVRRAMGNLREALINRLGRDGVQKQTVHDAVAIIDEAAQRIERL 197

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BLAST of mRNA_P-wetherbeei_contig59011.1.1 vs. uniprot
Match: A0A259MGP8_9PROT (PadR family transcriptional regulator n=1 Tax=Rhodospirillales bacterium 39-66-50 TaxID=1970570 RepID=A0A259MGP8_9PROT)

HSP 1 Score: 170 bits (430), Expect = 1.070e-51
Identity = 89/108 (82.41%), Postives = 98/108 (90.74%), Query Frame = 0

Query:    1 MVYPTLTMLDEMGHVAEVKSEGARKAFAVTAEGTAHLAERQAEVEALFARLAELATVSDRTDAMPVRRAMGNLRAVLIHRLGRDGVQKQTVHEAVAIIDEAAQRIERL 108
            M+YPTLTMLDEMGH+AEVKSEGARK+FAVT +GTAHL ER+ EV ALFARLAELA + +RTD+ PVRRAMGNLR  LI RLGRDGVQKQTVH+AVAIIDEAAQRIERL
Sbjct:   88 MIYPTLTMLDEMGHIAEVKSEGARKSFAVTPDGTAHLDERKVEVAALFARLAELAGLQERTDSAPVRRAMGNLREALILRLGRDGVQKQTVHDAVAIIDEAAQRIERL 195

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BLAST of mRNA_P-wetherbeei_contig59011.1.1 vs. uniprot
Match: A0A522ZIF9_9HYPH (PadR family transcriptional regulator n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A522ZIF9_9HYPH)

HSP 1 Score: 163 bits (412), Expect = 5.970e-49
Identity = 84/108 (77.78%), Postives = 97/108 (89.81%), Query Frame = 0

Query:    1 MVYPTLTMLDEMGHVAEVKSEGARKAFAVTAEGTAHLAERQAEVEALFARLAELATVSDRTDAMPVRRAMGNLRAVLIHRLGRDGVQKQTVHEAVAIIDEAAQRIERL 108
            MVYPTLT+LDEMGH+AE KSE ARKAFAVT +GT HL ER+AEV+ALFARLAELA++ +RTD+ PVRRAMGNLR  LI+RL RDGVQKQTV++A AIIDEAAQ+IERL
Sbjct:   89 MVYPTLTLLDEMGHIAETKSEKARKAFAVTPDGTTHLVERKAEVDALFARLAELASLQERTDSAPVRRAMGNLREALINRLSRDGVQKQTVYDAAAIIDEAAQKIERL 196

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BLAST of mRNA_P-wetherbeei_contig59011.1.1 vs. uniprot
Match: A0A1Q3LN88_9PROT (PadR family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3LN88_9PROT)

HSP 1 Score: 154 bits (388), Expect = 2.620e-45
Identity = 79/108 (73.15%), Postives = 93/108 (86.11%), Query Frame = 0

Query:    1 MVYPTLTMLDEMGHVAEVKSEGARKAFAVTAEGTAHLAERQAEVEALFARLAELATVSDRTDAMPVRRAMGNLRAVLIHRLGRDGVQKQTVHEAVAIIDEAAQRIERL 108
            MVYPTLTML +MGH+ E KSEG+RKAFA T EG AHLA R+ EV+ALFARL ELA + +RTD  P+RRAM NLRAVLIHRLGR+GV+ +T+H+AVAIIDEAAQ+IERL
Sbjct:   89 MVYPTLTMLLDMGHITEAKSEGSRKAFAATDEGVAHLAARKEEVDALFARLVELADLRERTDNAPIRRAMANLRAVLIHRLGREGVETKTLHDAVAIIDEAAQKIERL 196

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BLAST of mRNA_P-wetherbeei_contig59011.1.1 vs. uniprot
Match: A0A521QQZ7_9HYPH (PadR family transcriptional regulator n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521QQZ7_9HYPH)

HSP 1 Score: 153 bits (387), Expect = 3.290e-45
Identity = 80/108 (74.07%), Postives = 93/108 (86.11%), Query Frame = 0

Query:    1 MVYPTLTMLDEMGHVAEVKSEGARKAFAVTAEGTAHLAERQAEVEALFARLAELATVSDRTDAMPVRRAMGNLRAVLIHRLGRDGVQKQTVHEAVAIIDEAAQRIERL 108
            MVYPTLTML EMGHVAE KSEG RKAFAVT +G + LA ++ EV+ALFARLAELA   +RTD+ P+RRAM NLRAVLIHRLGR+ +Q QT+HEAV+IIDEAAQ+IERL
Sbjct:   84 MVYPTLTMLLEMGHVAEAKSEGPRKAFAVTEDGISELAAKKTEVDALFARLAELANQQERTDSAPIRRAMSNLRAVLIHRLGREDIQMQTLHEAVSIIDEAAQKIERL 191

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BLAST of mRNA_P-wetherbeei_contig59011.1.1 vs. uniprot
Match: UPI0012FA475A (PadR family transcriptional regulator n=1 Tax=Sphingomonas formosensis TaxID=861534 RepID=UPI0012FA475A)

HSP 1 Score: 151 bits (382), Expect = 1.890e-44
Identity = 75/108 (69.44%), Postives = 91/108 (84.26%), Query Frame = 0

Query:    1 MVYPTLTMLDEMGHVAEVKSEGARKAFAVTAEGTAHLAERQAEVEALFARLAELATVSDRTDAMPVRRAMGNLRAVLIHRLGRDGVQKQTVHEAVAIIDEAAQRIERL 108
            +VYPTLT+L +MGH+ E K+EG RKAF++T EGTAHLAE+Q EVEALF+RLAELA + +RTD  P+RRAMGNLRAVL+HRLGR+ V  +T H   AI+DEAAQRIERL
Sbjct:   85 VVYPTLTLLQDMGHIEEAKTEGTRKAFSITEEGTAHLAEKQDEVEALFSRLAELAALRERTDGAPIRRAMGNLRAVLMHRLGREDVSSETQHAVAAILDEAAQRIERL 192

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BLAST of mRNA_P-wetherbeei_contig59011.1.1 vs. uniprot
Match: G8AT73_9PROT (PadR domain-containing protein n=37 Tax=Azospirillaceae TaxID=2829815 RepID=G8AT73_9PROT)

HSP 1 Score: 139 bits (349), Expect = 2.250e-39
Identity = 72/108 (66.67%), Postives = 88/108 (81.48%), Query Frame = 0

Query:    1 MVYPTLTMLDEMGHVAEVKSEGARKAFAVTAEGTAHLAERQAEVEALFARLAELATVSDRTDAMPVRRAMGNLRAVLIHRLGRDGVQKQTVHEAVAIIDEAAQRIERL 108
            ++YPTL++L+EMGH+A+  +EGARK FAVT EGTA LA+  A V+ALFARLA LAT    TD  P+RRAM NL+AVL+HRLGR+GV   TVH AV+I+DEAAQRIERL
Sbjct:   90 VIYPTLSLLEEMGHIAKADAEGARKPFAVTPEGTAQLAQDAATVDALFARLAALATRRAHTDGAPIRRAMENLKAVLMHRLGREGVDADTVHAAVSILDEAAQRIERL 197

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BLAST of mRNA_P-wetherbeei_contig59011.1.1 vs. uniprot
Match: A0A1H8X4L8_9PROT (DNA-binding transcriptional regulator, PadR family n=2 Tax=Rhodospirillales bacterium URHD0017 TaxID=1380357 RepID=A0A1H8X4L8_9PROT)

HSP 1 Score: 139 bits (350), Expect = 4.310e-39
Identity = 69/108 (63.89%), Postives = 89/108 (82.41%), Query Frame = 0

Query:    1 MVYPTLTMLDEMGHVAEVKSEGARKAFAVTAEGTAHLAERQAEVEALFARLAELATVSDRTDAMPVRRAMGNLRAVLIHRLGRDGVQKQTVHEAVAIIDEAAQRIERL 108
            ++YPTLT+L +MG + E  +EG RK FA+TA+GTA L  ++ EVEALFARLAELA++ +RTD  PVRRAMGNLR VL+ RLG+DGVQ +T+HE  AI+DEAA++IERL
Sbjct:  127 VIYPTLTLLQDMGRIEEAAAEGPRKPFAITADGTAELLAKKPEVEALFARLAELASLRERTDGGPVRRAMGNLRTVLLDRLGKDGVQSETMHEVAAILDEAARKIERL 234

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BLAST of mRNA_P-wetherbeei_contig59011.1.1 vs. uniprot
Match: A0A1X9YKL5_9SPHN (PadR family transcriptional regulator n=1 Tax=Sphingomonas sp. KC8 TaxID=1030157 RepID=A0A1X9YKL5_9SPHN)

HSP 1 Score: 135 bits (339), Expect = 2.920e-38
Identity = 68/108 (62.96%), Postives = 88/108 (81.48%), Query Frame = 0

Query:    1 MVYPTLTMLDEMGHVAEVKSEGARKAFAVTAEGTAHLAERQAEVEALFARLAELATVSDRTDAMPVRRAMGNLRAVLIHRLGRDGVQKQTVHEAVAIIDEAAQRIERL 108
            ++YPT+T+L +M  + E ++EG RKAFA+T  G AHLAERQA+V+ALFARLA LA V +RTDAMPV+RAM NLR VL  RLGR+ V  +T+HEAVA+IDE A++IER+
Sbjct:   58 VIYPTITLLQDMDLIREAETEGTRKAFAITDAGIAHLAERQADVDALFARLAALAEVRERTDAMPVKRAMHNLRTVLRQRLGREDVSSETIHEAVALIDEVARKIERM 165

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig59011.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig59011.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001C21F17F	1.710e-53	84.26	PadR family transcriptional regulator n=2 Tax=Reyr...	[more]
A0A6N6ZYD3_9PROT	3.990e-52	80.56	PadR domain-containing protein n=1 Tax=Rhodospiril...	[more]
A0A259MGP8_9PROT	1.070e-51	82.41	PadR family transcriptional regulator n=1 Tax=Rhod...	[more]
A0A522ZIF9_9HYPH	5.970e-49	77.78	PadR family transcriptional regulator n=1 Tax=Reyr...	[more]
A0A1Q3LN88_9PROT	2.620e-45	73.15	PadR family transcriptional regulator n=1 Tax=Alph...	[more]
A0A521QQZ7_9HYPH	3.290e-45	74.07	PadR family transcriptional regulator n=1 Tax=Reyr...	[more]
UPI0012FA475A	1.890e-44	69.44	PadR family transcriptional regulator n=1 Tax=Sphi...	[more]
G8AT73_9PROT	2.250e-39	66.67	PadR domain-containing protein n=37 Tax=Azospirill...	[more]
A0A1H8X4L8_9PROT	4.310e-39	63.89	DNA-binding transcriptional regulator, PadR family...	[more]
A0A1X9YKL5_9SPHN	2.920e-38	62.96	PadR family transcriptional regulator n=1 Tax=Sphi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 1..62 e-value: 2.3E-6 score: 29.0
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 1..76

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig59011	contig	P-wetherbeei_contig59011:87..413 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig59011.1.1	mRNA_P-wetherbeei_contig59011.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig59011 3..502 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig59011.1.1 ID=prot_P-wetherbeei_contig59011.1.1|Name=mRNA_P-wetherbeei_contig59011.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=109bp
MVYPTLTMLDEMGHVAEVKSEGARKAFAVTAEGTAHLAERQAEVEALFAR
LAELATVSDRTDAMPVRRAMGNLRAVLIHRLGRDGVQKQTVHEAVAIIDE
AAQRIERL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036388	WH-like_DNA-bd_sf
IPR036390	WH_DNA-bd_sf