prot_P-wetherbeei_contig58996.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig58996.1.1
Unique Nameprot_P-wetherbeei_contig58996.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length62
Homology
BLAST of mRNA_P-wetherbeei_contig58996.1.1 vs. uniprot
Match: A0A836CG33_9STRA (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG33_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 1.050e-22
Identity = 50/61 (81.97%), Postives = 53/61 (86.89%), Query Frame = 0
Query:    1 MASYYEKLTRIFWVSENHLFHAYAWYKYYSLSREFNKTLTTEERMVQASSVLLATLAIPQV 61
            MASYYEKLTRIF VSENHLFHAYAWYKYY+LSRE+NK LT EER  QA  VLLA LAIP+V
Sbjct:  282 MASYYEKLTRIFLVSENHLFHAYAWYKYYTLSREYNKALTAEERTQQACCVLLAALAIPEV 342          
BLAST of mRNA_P-wetherbeei_contig58996.1.1 vs. uniprot
Match: D7FZL6_ECTSI (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZL6_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 1.260e-21
Identity = 44/61 (72.13%), Postives = 55/61 (90.16%), Query Frame = 0
Query:    1 MASYYEKLTRIFWVSENHLFHAYAWYKYYSLSREFNKTLTTEERMVQASSVLLATLAIPQV 61
            MASYYEKLTRIFWVSEN+LFHAYAWYK++SL  E+NKTLT+E ++ QA+ VLLA ++IPQ+
Sbjct:  284 MASYYEKLTRIFWVSENYLFHAYAWYKFFSLGSEYNKTLTSEAKVTQANCVLLAAISIPQI 344          
BLAST of mRNA_P-wetherbeei_contig58996.1.1 vs. uniprot
Match: A0A6H5KVX7_9PHAE (PCI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVX7_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 3.200e-21
Identity = 44/61 (72.13%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    1 MASYYEKLTRIFWVSENHLFHAYAWYKYYSLSREFNKTLTTEERMVQASSVLLATLAIPQV 61
            MASYYEKLTRIFWVSEN LFHAYAWYK++SL  E+NKTLT+E ++ QA+ VLLA ++IPQ+
Sbjct:   74 MASYYEKLTRIFWVSENFLFHAYAWYKFFSLGSEYNKTLTSEAKVTQANCVLLAAISIPQI 134          
BLAST of mRNA_P-wetherbeei_contig58996.1.1 vs. uniprot
Match: A0A6V1NAU3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NAU3_HETAK)

HSP 1 Score: 89.0 bits (219), Expect = 1.680e-19
Identity = 41/60 (68.33%), Postives = 49/60 (81.67%), Query Frame = 0
Query:    1 MASYYEKLTRIFWVSENHLFHAYAWYKYYSLSREFNKTLTTEERMVQASSVLLATLAIPQ 60
            MA+Y+E+LTRIFWVS+N LFHAYAW KYY L RE+NK LT EE+  QA  VLLA LA+P+
Sbjct:  283 MAAYFEQLTRIFWVSQNRLFHAYAWLKYYQLGREYNKVLTEEEKRAQAGKVLLAALAVPE 342          
BLAST of mRNA_P-wetherbeei_contig58996.1.1 vs. uniprot
Match: A0A812R606_SYMMI (TIF3A1 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812R606_SYMMI)

HSP 1 Score: 89.4 bits (220), Expect = 2.420e-19
Identity = 43/61 (70.49%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MASYYEKLTRIFWVSENHLFHAYAWYKYYSLSREFNKTLTTEERMVQASSVLLATLAIPQV 61
            MA+YYEKLTRIFWVSEN+LFHAYAWY++YSLS E+ K +  EE+ + ASSVLLATL IP +
Sbjct:  222 MATYYEKLTRIFWVSENYLFHAYAWYRFYSLSCEYRKDIKPEEKSLFASSVLLATLCIPTI 282          
BLAST of mRNA_P-wetherbeei_contig58996.1.1 vs. uniprot
Match: A0A7S3L380_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L380_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.520e-19
Identity = 41/59 (69.49%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 MASYYEKLTRIFWVSENHLFHAYAWYKYYSLSREFNKTLTTEERMVQASSVLLATLAIP 59
            MASYYEKLT +FWVSEN+LFHA+AWYKYYSL +EF++ ++ +++ VQAS+VLLATL IP
Sbjct:  249 MASYYEKLTTLFWVSENYLFHAFAWYKYYSLYKEFHRGMSADQQRVQASAVLLATLCIP 307          
BLAST of mRNA_P-wetherbeei_contig58996.1.1 vs. uniprot
Match: A0A7S4R7B1_9STRA (Eukaryotic translation initiation factor 3 subunit A n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R7B1_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 4.700e-19
Identity = 41/61 (67.21%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MASYYEKLTRIFWVSENHLFHAYAWYKYYSLSREFNKTLTTEERMVQASSVLLATLAIPQV 61
            MA+YYEKLT +FWVSEN+LFHA+AWYKYY+L +EFN+ ++ E R +QAS+VLLA L IP V
Sbjct:  308 MAAYYEKLTTLFWVSENYLFHAFAWYKYYTLCKEFNRGMSVEMRQMQASAVLLAALCIPTV 368          
BLAST of mRNA_P-wetherbeei_contig58996.1.1 vs. uniprot
Match: A0A7S1ULC2_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1ULC2_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 6.390e-19
Identity = 39/59 (66.10%), Postives = 53/59 (89.83%), Query Frame = 0
Query:    1 MASYYEKLTRIFWVSENHLFHAYAWYKYYSLSREFNKTLTTEERMVQASSVLLATLAIP 59
            MA+YYEKLT +FWVSEN+LFHA+AWYKYY+L +E+N++++ E + +QAS+VLLATL IP
Sbjct:   29 MAAYYEKLTTLFWVSENYLFHAFAWYKYYTLCKEYNRSMSDEMKQMQASAVLLATLCIP 87          
BLAST of mRNA_P-wetherbeei_contig58996.1.1 vs. uniprot
Match: A0A8J9S3E1_PHATR (Hypothetical protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9S3E1_PHATR)

HSP 1 Score: 87.4 bits (215), Expect = 1.190e-18
Identity = 40/61 (65.57%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MASYYEKLTRIFWVSENHLFHAYAWYKYYSLSREFNKTLTTEERMVQASSVLLATLAIPQV 61
            MASYYEKLT +FWVSEN+LFHA+AWYKYY+L +EFN+ ++ + + +QAS+VLLA L IP V
Sbjct:   67 MASYYEKLTTLFWVSENYLFHAFAWYKYYTLCKEFNRGMSEDTKRMQASAVLLAALCIPSV 127          
BLAST of mRNA_P-wetherbeei_contig58996.1.1 vs. uniprot
Match: B7G0T8_PHATC (Eukaryotic translation initiation factor 3 subunit A n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G0T8_PHATC)

HSP 1 Score: 87.4 bits (215), Expect = 1.200e-18
Identity = 40/61 (65.57%), Postives = 52/61 (85.25%), Query Frame = 0
Query:    1 MASYYEKLTRIFWVSENHLFHAYAWYKYYSLSREFNKTLTTEERMVQASSVLLATLAIPQV 61
            MASYYEKLT +FWVSEN+LFHA+AWYKYY+L +EFN+ ++ + + +QAS+VLLA L IP V
Sbjct:  302 MASYYEKLTTLFWVSENYLFHAFAWYKYYTLCKEFNRGMSEDTKRMQASAVLLAALCIPSV 362          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58996.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CG33_9STRA1.050e-2281.97Eukaryotic translation initiation factor 3 subunit... [more]
D7FZL6_ECTSI1.260e-2172.13Eukaryotic translation initiation factor 3 subunit... [more]
A0A6H5KVX7_9PHAE3.200e-2172.13PCI domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6V1NAU3_HETAK1.680e-1968.33Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A812R606_SYMMI2.420e-1970.49TIF3A1 protein (Fragment) n=1 Tax=Symbiodinium mic... [more]
A0A7S3L380_9STRA2.520e-1969.49Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S4R7B1_9STRA4.700e-1967.21Eukaryotic translation initiation factor 3 subunit... [more]
A0A7S1ULC2_9STRA6.390e-1966.10Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A8J9S3E1_PHATR1.190e-1865.57Hypothetical protein n=1 Tax=Phaeodactylum tricorn... [more]
B7G0T8_PHATC1.200e-1865.57Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.25.40.860coord: 1..62
e-value: 3.7E-22
score: 81.2
NoneNo IPR availablePANTHERPTHR14005:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Acoord: 1..60
IPR027512Eukaryotic translation initiation factor 3 subunit APANTHERPTHR14005EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNITcoord: 1..60

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58996contigP-wetherbeei_contig58996:124..309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58996.1.1mRNA_P-wetherbeei_contig58996.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig58996 97..309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig58996.1.1 ID=prot_P-wetherbeei_contig58996.1.1|Name=mRNA_P-wetherbeei_contig58996.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=62bp
MASYYEKLTRIFWVSENHLFHAYAWYKYYSLSREFNKTLTTEERMVQASS
VLLATLAIPQVY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027512EIF3A