prot_P-wetherbeei_contig5883.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5883.1.2
Unique Nameprot_P-wetherbeei_contig5883.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length218
Homology
BLAST of mRNA_P-wetherbeei_contig5883.1.2 vs. uniprot
Match: D7FLA3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLA3_ECTSI)

HSP 1 Score: 138 bits (348), Expect = 1.190e-37
Identity = 66/167 (39.52%), Postives = 110/167 (65.87%), Query Frame = 0
Query:   54 RRLTLQIVSMQYESISMNY-DLTANVQIRMDLEIYNPNFVPAHVNNITLVMLHEDVYGRDVAFGVIRVQGEFNLRM--RSSRVVDSCMALDAVPPTVALQLGREIAAKNGTVLTKARSYMDVTIFRQKLMLEAECVQELQADVFPVRIKRIECSYFYNDALIPVLPP 217
            R  T QIV M+Y  +SMN   +  +++I M LE++NPN+VPA +  I + M HED+ G +  FGV+   GE   R+  R S VV + M + ++P ++A+ + +++A   G ++++A ++MDV +    +++EA+CVQ +QADVFP++I  I+C Y+Y +  +PVLPP
Sbjct:   23 RAPTWQIVDMKYRGLSMNIASIGVDMKIDMGLEVFNPNYVPATLKGIVMTMFHEDLGGEEAPFGVVTFAGENAARLPARGSAVVQAQMEVVSLPTSMAMGIAKDVA-DGGVIVSRASAFMDVKVMGGDILIEADCVQHMQADVFPIKINEIDCKYYYKNVRVPVLPP 188          
BLAST of mRNA_P-wetherbeei_contig5883.1.2 vs. uniprot
Match: A0A836CLA5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLA5_9STRA)

HSP 1 Score: 131 bits (329), Expect = 9.000e-35
Identity = 69/165 (41.82%), Postives = 98/165 (59.39%), Query Frame = 0
Query:   54 RRLTLQIVSMQYESISMNYDLTANVQIRMDLEIYNPNFVPAHVNNITLVMLHEDVYGRDVAFGVIRVQGEFNLRMRSSRVVDSCMALDAVPPTVALQLGREIAAKNGTVLTKARSYMDVTIF--RQKLMLEAECVQELQADVFPVRIKRIECSYFYNDALIPVLP 216
            R  T QI   +Y S+S NYD T   ++ ++LE+YN N + AHVN I L +LH D +G +  F  I V G+F L  R S      M +DA+ P +A  L R+ AA  GT++T+A S MDV++     +  LEAECVQ L+AD FP+ +  I+C Y+     +P+LP
Sbjct:   22 RAPTWQIRGQKYTSVSFNYDFTMAAEMELELELYNDNLLSAHVNAIELEVLHRDAWGVERPFARIHVAGDFALPARGSVRRAGTMVMDALAPAMAGALARDAAANGGTLVTRAHSTMDVSVLGGAARARLEAECVQHLRADAFPMEVTYIDCRYYMGRHRVPMLP 186          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5883.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FLA3_ECTSI1.190e-3739.52Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CLA5_9STRA9.000e-3541.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5883contigP-wetherbeei_contig5883:232..1773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5883.1.2mRNA_P-wetherbeei_contig5883.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5883 222..2929 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5883.1.2 ID=prot_P-wetherbeei_contig5883.1.2|Name=mRNA_P-wetherbeei_contig5883.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp
MVLQVAAVGLIGIALAFLYPRAPTWQVPAKLADYSLSLSHSKHRPLIPFC
SMRRRLTLQIVSMQYESISMNYDLTANVQIRMDLEIYNPNFVPAHVNNIT
LVMLHEDVYGRDVAFGVIRVQGEFNLRMRSSRVVDSCMALDAVPPTVALQ
LGREIAAKNGTVLTKARSYMDVTIFRQKLMLEAECVQELQADVFPVRIKR
IECSYFYNDALIPVLPP*
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