prot_P-wetherbeei_contig58763.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig58763.2.1
Unique Name	prot_P-wetherbeei_contig58763.2.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	102

Homology

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BLAST of mRNA_P-wetherbeei_contig58763.2.1 vs. uniprot
Match: A0A5C7NWP4_9PROT (ETC complex I subunit n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NWP4_9PROT)

HSP 1 Score: 145 bits (365), Expect = 3.430e-43
Identity = 65/101 (64.36%), Postives = 83/101 (82.18%), Query Frame = 0

Query:    1 MQVRIFKPARNAMQSGKGKTKEWVLQFDAPVKREADPLMGWTSAAETRQQVTLKFDSKEEAIAYAEREGYAYTVEEPKPHRLQSRAYADNFKFDRIGKWTH 101
            MQVRI++PA+ AMQSG+ +T++W+L+F     R ADPLMGWT + +T++QV LKFD+KEEAIAYAE+ G AY VEEP+   LQ +AYADNFKFDRIG+WTH
Sbjct:    1 MQVRIYQPAKTAMQSGRAQTRQWILEFPPSAPRFADPLMGWTGSTDTQRQVKLKFDTKEEAIAYAEKHGLAYLVEEPQHRALQPKAYADNFKFDRIGRWTH 101

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BLAST of mRNA_P-wetherbeei_contig58763.2.1 vs. uniprot
Match: UPI00093165C2 (ETC complex I subunit n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI00093165C2)

HSP 1 Score: 142 bits (358), Expect = 4.000e-42
Identity = 65/101 (64.36%), Postives = 81/101 (80.20%), Query Frame = 0

Query:    1 MQVRIFKPARNAMQSGKGKTKEWVLQFDAPVKREADPLMGWTSAAETRQQVTLKFDSKEEAIAYAEREGYAYTVEEPKPHRLQSRAYADNFKFDRIGKWTH 101
            M  RI+KPA+ AMQSG  +TKEWVL+ +A V R+ DPLMGWTS+A+TR QV L+F SKEEAIAYAEREG  Y ++EPKP +L  ++Y+DNFKF R+G WTH
Sbjct:    1 MTARIYKPAKTAMQSGTARTKEWVLEHEAAVPRQIDPLMGWTSSADTRTQVRLEFASKEEAIAYAEREGIPYRLDEPKPRKLVRKSYSDNFKFGRLGAWTH 101

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BLAST of mRNA_P-wetherbeei_contig58763.2.1 vs. uniprot
Match: UPI00036539F0 (ETC complex I subunit n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI00036539F0)

HSP 1 Score: 141 bits (356), Expect = 8.060e-42
Identity = 66/101 (65.35%), Postives = 79/101 (78.22%), Query Frame = 0

Query:    1 MQVRIFKPARNAMQSGKGKTKEWVLQFDAPVKREADPLMGWTSAAETRQQVTLKFDSKEEAIAYAEREGYAYTVEEPKPHRLQSRAYADNFKFDRIGKWTH 101
            M  RIFKPA+ AMQSG  +TKEWVL+ ++ V R+ DPLMGWT +A+TR QV L+FD+KEEAIAYAER G  Y ++EPKP  L  +AYADNFKF RIG WTH
Sbjct:    1 MSARIFKPAKTAMQSGFARTKEWVLEHESNVPRQIDPLMGWTGSADTRTQVRLEFDTKEEAIAYAERNGIPYRLDEPKPRALIRKAYADNFKFGRIGAWTH 101

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BLAST of mRNA_P-wetherbeei_contig58763.2.1 vs. uniprot
Match: UPI0019945116 (Oxidoreductase n=2 Tax=Chelatococcus reniformis TaxID=1494448 RepID=UPI0019945116)

HSP 1 Score: 139 bits (349), Expect = 1.090e-40
Identity = 65/101 (64.36%), Postives = 76/101 (75.25%), Query Frame = 0

Query:    1 MQVRIFKPARNAMQSGKGKTKEWVLQFDAPVKREADPLMGWTSAAETRQQVTLKFDSKEEAIAYAEREGYAYTVEEPKPHRLQSRAYADNFKFDRIGKWTH 101
            M  RIF+PAR AMQSG  KTK W L FD    R  +PLMGWTS+A+TRQQ+ L F++KEEAIAYAER G AY VEEPK    +  AY+DNFKF+RIG+WTH
Sbjct:    6 MTARIFRPARTAMQSGTAKTKRWTLDFDPSAPRRVEPLMGWTSSADTRQQLRLSFETKEEAIAYAERNGIAYRVEEPKEVHHRQMAYSDNFKFNRIGQWTH 106

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BLAST of mRNA_P-wetherbeei_contig58763.2.1 vs. uniprot
Match: A0A839SUY7_9HYPH (Uncharacterized protein n=1 Tax=Limibacillus halophilus TaxID=1579333 RepID=A0A839SUY7_9HYPH)

HSP 1 Score: 137 bits (344), Expect = 5.430e-40
Identity = 58/101 (57.43%), Postives = 80/101 (79.21%), Query Frame = 0

Query:    1 MQVRIFKPARNAMQSGKGKTKEWVLQFDAPVKREADPLMGWTSAAETRQQVTLKFDSKEEAIAYAEREGYAYTVEEPKPHRLQSRAYADNFKFDRIGKWTH 101
            MQVRIFKPA+ AMQSG+ +T  W ++F+   +RE +PLMGWTS+AET+ QV L FDSKEEA+AYAE++G  Y++ EP   +++ +AYADNF + R+G+WTH
Sbjct:    1 MQVRIFKPAKTAMQSGRARTDRWCMEFEPGARREIEPLMGWTSSAETKHQVCLWFDSKEEAVAYAEKQGLMYSISEPTARKIKPKAYADNFSYSRLGRWTH 101

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BLAST of mRNA_P-wetherbeei_contig58763.2.1 vs. uniprot
Match: A0A2D7FDH1_9HYPH (ETC complex I subunit n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FDH1_9HYPH)

HSP 1 Score: 137 bits (344), Expect = 5.430e-40
Identity = 61/101 (60.40%), Postives = 78/101 (77.23%), Query Frame = 0

Query:    1 MQVRIFKPARNAMQSGKGKTKEWVLQFDAPVKREADPLMGWTSAAETRQQVTLKFDSKEEAIAYAEREGYAYTVEEPKPHRLQSRAYADNFKFDRIGKWTH 101
            M  RI++PA+ AMQSGKG+TK WVL+ +    RE DPLMGWTS+++ RQQ+ L+FDSKE+A+AYAER G  Y VEEPK   +  ++YADNFK+ RIG WTH
Sbjct:    1 MTARIYQPAKTAMQSGKGRTKGWVLEHEPAAAREIDPLMGWTSSSDMRQQIKLRFDSKEDAVAYAERNGLPYVVEEPKKRLVIKKSYADNFKYGRIGSWTH 101

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BLAST of mRNA_P-wetherbeei_contig58763.2.1 vs. uniprot
Match: A0A7Y0HFQ2_9PROT (ETC complex I subunit n=2 Tax=Pacificispira spongiicola TaxID=2729598 RepID=A0A7Y0HFQ2_9PROT)

HSP 1 Score: 136 bits (343), Expect = 7.720e-40
Identity = 58/101 (57.43%), Postives = 82/101 (81.19%), Query Frame = 0

Query:    1 MQVRIFKPARNAMQSGKGKTKEWVLQFDAPVKREADPLMGWTSAAETRQQVTLKFDSKEEAIAYAEREGYAYTVEEPKPHRLQSRAYADNFKFDRIGKWTH 101
            M+VRIFKPA+ AMQSG+GKTK+W+++F+       DPLMGW  +A+TR+QV L F+++EEA+AYA+++GY+YTVE+PK  R++ +AYADNF +DR   WTH
Sbjct:    1 MEVRIFKPAKTAMQSGRGKTKDWIVEFEPTDASRPDPLMGWVGSADTRKQVRLSFETEEEAVAYAKKQGYSYTVEKPKSRRIKPKAYADNFAYDRRRPWTH 101

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BLAST of mRNA_P-wetherbeei_contig58763.2.1 vs. uniprot
Match: A0A6I3KQE4_9HYPH (ETC complex I subunit n=3 Tax=Hyphomicrobium TaxID=81 RepID=A0A6I3KQE4_9HYPH)

HSP 1 Score: 135 bits (341), Expect = 1.560e-39
Identity = 63/101 (62.38%), Postives = 77/101 (76.24%), Query Frame = 0

Query:    1 MQVRIFKPARNAMQSGKGKTKEWVLQFDAPVKREADPLMGWTSAAETRQQVTLKFDSKEEAIAYAEREGYAYTVEEPKPHRLQSRAYADNFKFDRIGKWTH 101
            M  RIFKPAR AMQSG+G+TKEWVL+F     RE +PLMGWT+  +   +V L FDSKEEAIAYAEREG AY + EP P ++  ++YADNFK+ RIG+WTH
Sbjct:    1 MVARIFKPARTAMQSGEGRTKEWVLEFAPASPREIEPLMGWTATRDMSAEVQLAFDSKEEAIAYAEREGIAYQLLEPSPRKMIRKSYADNFKYGRIGRWTH 101

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BLAST of mRNA_P-wetherbeei_contig58763.2.1 vs. uniprot
Match: UPI0018732369 (ETC complex I subunit n=1 Tax=Pelagibius sp. NBU2595 TaxID=2762760 RepID=UPI0018732369)

HSP 1 Score: 135 bits (339), Expect = 3.140e-39
Identity = 57/101 (56.44%), Postives = 80/101 (79.21%), Query Frame = 0

Query:    1 MQVRIFKPARNAMQSGKGKTKEWVLQFDAPVKREADPLMGWTSAAETRQQVTLKFDSKEEAIAYAEREGYAYTVEEPKPHRLQSRAYADNFKFDRIGKWTH 101
            MQVRIF+P + AMQSG+  TK+W ++F+    RE +PLMGWTS+A+TR Q+ L+FD+ EEAIAYA++EG  Y VE P   +++ +AYADNF++DR+G+WTH
Sbjct:    1 MQVRIFQPPKTAMQSGRATTKQWTMEFEPQAAREVEPLMGWTSSADTRAQLRLRFDTLEEAIAYAQKEGLMYNVERPHERKVKPKAYADNFRYDRLGRWTH 101

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BLAST of mRNA_P-wetherbeei_contig58763.2.1 vs. uniprot
Match: UPI0015E67CA2 (ETC complex I subunit n=1 Tax=Hyphomicrobium methylovorum TaxID=84 RepID=UPI0015E67CA2)

HSP 1 Score: 135 bits (339), Expect = 3.140e-39
Identity = 62/101 (61.39%), Postives = 78/101 (77.23%), Query Frame = 0

Query:    1 MQVRIFKPARNAMQSGKGKTKEWVLQFDAPVKREADPLMGWTSAAETRQQVTLKFDSKEEAIAYAEREGYAYTVEEPKPHRLQSRAYADNFKFDRIGKWTH 101
            M  RI+KPAR AMQSG+ +TK+WVL+F+    R ADPLMGWTSA ET+ QV L+FD+KEEAIAYA REG A+T+ EPKP +   ++YADNF++ R   WTH
Sbjct:    1 MTARIYKPARTAMQSGEARTKDWVLEFEYTTPRRADPLMGWTSARETQPQVRLEFDTKEEAIAYATREGIAFTLTEPKPRKPIRKSYADNFRYGRTTNWTH 101

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig58763.2.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig58763.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A5C7NWP4_9PROT	3.430e-43	64.36	ETC complex I subunit n=1 Tax=Rhodospirillaceae ba...	[more]
UPI00093165C2	4.000e-42	64.36	ETC complex I subunit n=1 Tax=Hyphomicrobium sp. C...	[more]
UPI00036539F0	8.060e-42	65.35	ETC complex I subunit n=1 Tax=Hyphomicrobium zavar...	[more]
UPI0019945116	1.090e-40	64.36	Oxidoreductase n=2 Tax=Chelatococcus reniformis Ta...	[more]
A0A839SUY7_9HYPH	5.430e-40	57.43	Uncharacterized protein n=1 Tax=Limibacillus halop...	[more]
A0A2D7FDH1_9HYPH	5.430e-40	60.40	ETC complex I subunit n=2 Tax=Hyphomicrobiaceae Ta...	[more]
A0A7Y0HFQ2_9PROT	7.720e-40	57.43	ETC complex I subunit n=2 Tax=Pacificispira spongi...	[more]
A0A6I3KQE4_9HYPH	1.560e-39	62.38	ETC complex I subunit n=3 Tax=Hyphomicrobium TaxID...	[more]
UPI0018732369	3.140e-39	56.44	ETC complex I subunit n=1 Tax=Pelagibius sp. NBU25...	[more]
UPI0015E67CA2	3.140e-39	61.39	ETC complex I subunit n=1 Tax=Hyphomicrobium methy...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PFAM	PF04800	ETC_C1_NDUFA4	coord: 2..95 e-value: 4.5E-37 score: 126.2
IPR006885	NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial	PANTHER	PTHR12219	NADH-UBIQUINONE OXIDOREDUCTASE	coord: 2..94
IPR038532	NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamily	GENE3D	3.30.160.190	atu1810 like domain	coord: 1..79 e-value: 2.4E-33 score: 115.7
None	No IPR available	PANTHER	PTHR12219:SF8	NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIAL	coord: 2..94

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig58763	contig	P-wetherbeei_contig58763:99..404 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig58763.2.1	mRNA_P-wetherbeei_contig58763.2.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig58763 99..407 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig58763.2.1 ID=prot_P-wetherbeei_contig58763.2.1|Name=mRNA_P-wetherbeei_contig58763.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=102bp
MQVRIFKPARNAMQSGKGKTKEWVLQFDAPVKREADPLMGWTSAAETRQQ
VTLKFDSKEEAIAYAEREGYAYTVEEPKPHRLQSRAYADNFKFDRIGKWT
H*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006885	NADH_UbQ_FeS_4_mit
IPR038532	NDUFS4-like_sf