prot_P-wetherbeei_contig58529.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig58529.2.1
Unique Nameprot_P-wetherbeei_contig58529.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length110
Homology
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BLAST of mRNA_P-wetherbeei_contig58529.2.1 vs. uniprot
Match: A0A0R3MX27_9BRAD (PG_binding_1 domain-containing protein n=8 Tax=Bradyrhizobium TaxID=374 RepID=A0A0R3MX27_9BRAD)

HSP 1 Score: 53.1 bits (126), Expect = 8.470e-6
Identity = 43/109 (39.45%), Postives = 48/109 (44.04%), Query Frame = 0 
Query:    1 PATPVLSRPSVQLSAGALGIVTLLQAFGIGGLTLPFATGXXXXXXXXXXXXXXXXXXXXXXXXPVATGSTLATXXXXXXXXXXXXXXXXXXXXXGSNLLGSLFSSFGKK 109
            P  P +SRPSVQLSAG LGIVTLLQ+ GI  L LPF  G                        PV+ GST+AT                      S LLG L  +FGKK
Sbjct:  560 PLAPAMSRPSVQLSAGMLGIVTLLQSAGI--LNLPFNLGAIAGQAPTTTA-------------PVS-GSTMATLIPIITGVIGATGGFGALGGIASKLLGGLIGAFGKK 652
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BLAST of mRNA_P-wetherbeei_contig58529.2.1 vs. uniprot
Match: UPI001C020F69 (peptidoglycan-binding protein n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001C020F69)

HSP 1 Score: 52.8 bits (125), Expect = 1.160e-5
Identity = 29/36 (80.56%), Postives = 29/36 (80.56%), Query Frame = 0 
Query:    4 PVLSRPSVQLSAGALGIVTLLQAFGIGGLTLPFATG 39
            P LSRPSVQLSAGALGIVTLLQAFG   L LPF  G
Sbjct:  556 PALSRPSVQLSAGALGIVTLLQAFGF--LNLPFNLG 589
[Close]
BLAST of mRNA_P-wetherbeei_contig58529.2.1 vs. uniprot
Match: UPI0006865FAF (peptidoglycan-binding protein n=1 Tax=Bradyrhizobium sp. ARR65 TaxID=1040989 RepID=UPI0006865FAF)

HSP 1 Score: 52.4 bits (124), Expect = 1.570e-5
Identity = 29/39 (74.36%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:    1 PATPVLSRPSVQLSAGALGIVTLLQAFGIGGLTLPFATG 39
            P TPVLSRPSVQLSAGALGIVT+LQA  +G + LPF  G
Sbjct:  548 PNTPVLSRPSVQLSAGALGIVTILQA--LGKIGLPFNLG 584
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58529.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A0R3MX27_9BRAD8.470e-639.45PG_binding_1 domain-containing protein n=8 Tax=Bra... [more]
UPI001C020F691.160e-580.56peptidoglycan-binding protein n=2 Tax=unclassified... [more]
UPI0006865FAF1.570e-574.36peptidoglycan-binding protein n=1 Tax=Bradyrhizobi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58529contigP-wetherbeei_contig58529:173..502 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58529.2.1mRNA_P-wetherbeei_contig58529.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig58529 173..502 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig58529.2.1 ID=prot_P-wetherbeei_contig58529.2.1|Name=mRNA_P-wetherbeei_contig58529.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp
PATPVLSRPSVQLSAGALGIVTLLQAFGIGGLTLPFATGATTAAAATAAT
TAATTVGSVAATTPVATGSTLATLIPLITGIIGATGGFGALGGIGSNLLG
SLFSSFGKK*
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