prot_P-wetherbeei_contig58384.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig58384.1.1
Unique Nameprot_P-wetherbeei_contig58384.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length106
Homology
BLAST of mRNA_P-wetherbeei_contig58384.1.1 vs. uniprot
Match: A0A0J7YPP3_BETVV (SH2_2 domain-containing protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J7YPP3_BETVV)

HSP 1 Score: 71.2 bits (173), Expect = 2.540e-13
Identity = 33/97 (34.02%), Postives = 54/97 (55.67%), Query Frame = 0
Query:   10 LTTETCYPPGTEAEVEETLRDEKGNEPKRIPYYLLMAPGHPGYFELMYLPGGTIRKERFEVTPAGYRMGRETLRSCTELLKFFKENAARQQSSSSRR 106
            +  E C+  GTE E++  L+DEK +EPKRIPY+   +  HPG F   +LP   +  E  ++TP GYR  +      ++++ + K +  +Q    SR+
Sbjct:   22 IVQEKCFRYGTEEEIDRLLKDEKEDEPKRIPYFFGYSSKHPGLFVFSFLPSKHVVHELVKLTPKGYRFQKRNFTKASQIIAYIKSDFVKQLKERSRK 118          
BLAST of mRNA_P-wetherbeei_contig58384.1.1 vs. uniprot
Match: A0A151ZDL6_9MYCE (Transcription elongation factor spt6 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZDL6_9MYCE)

HSP 1 Score: 67.0 bits (162), Expect = 1.060e-10
Identity = 30/79 (37.97%), Postives = 47/79 (59.49%), Query Frame = 0
Query:   19 GTEAEVEETLRDEKGNEPKRIPYYLLMAPGHPGYFELMYLPGGTIRKERFEVTPAGYRMGRETLRSCTELLKFFKENAA 97
            GT+ E+++ +R EK N PKRIPYY  +   HPG+  L ++P  T R E   +   G+ + ++   S  +L+K+FK N A
Sbjct: 1330 GTQEEIDQLIRQEKINNPKRIPYYFGINQSHPGFVTLYHVPTSTPRHEHIFIKSDGFLLRKKLFHSLNDLIKYFKTNYA 1408          
BLAST of mRNA_P-wetherbeei_contig58384.1.1 vs. uniprot
Match: UPI00092F16DD (transcription elongation factor SPT6-like isoform X13 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092F16DD)

HSP 1 Score: 52.8 bits (125), Expect = 1.070e-5
Identity = 25/77 (32.47%), Postives = 43/77 (55.84%), Query Frame = 0
Query:   19 GTEAEVEETLRDEKGNEPKRIPYYLLMAPGHPGYFELMYLPGGTIRKERFEVTPAGYRMGRETLRSCTELLKFFKEN 95
            G++AEV+E L+ EK   PKRIPY   ++  HPG F L Y+       E   + P G++  ++   +  +L+ +F+ +
Sbjct: 1289 GSKAEVDELLKQEKEEYPKRIPYGFGISHEHPGTFILSYIRSTKTHHEFIGIHPKGFKFRKQIFENLEQLVTYFQNH 1365          
BLAST of mRNA_P-wetherbeei_contig58384.1.1 vs. uniprot
Match: A0A4P1RLE1_LUPAN (S1 motif domain-containing protein n=15 Tax=Lupinus TaxID=3869 RepID=A0A4P1RLE1_LUPAN)

HSP 1 Score: 52.8 bits (125), Expect = 1.070e-5
Identity = 25/77 (32.47%), Postives = 43/77 (55.84%), Query Frame = 0
Query:   19 GTEAEVEETLRDEKGNEPKRIPYYLLMAPGHPGYFELMYLPGGTIRKERFEVTPAGYRMGRETLRSCTELLKFFKEN 95
            G++AEV+E L+ EK   PKRIPY   ++  HPG F L Y+       E   + P G++  ++   +  +L+ +F+ +
Sbjct: 1290 GSKAEVDELLKQEKEEYPKRIPYGFGISHEHPGTFILSYIRSTKTHHEFIGIHPKGFKFRKQIFENLEQLVTYFQNH 1366          
BLAST of mRNA_P-wetherbeei_contig58384.1.1 vs. uniprot
Match: UPI00128FC3EC (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI00128FC3EC)

HSP 1 Score: 49.3 bits (116), Expect = 3.150e-5
Identity = 25/73 (34.25%), Postives = 41/73 (56.16%), Query Frame = 0
Query:   19 GTEAEVEETLRDEKGNEPKRIPYYLLMAPGHPGYFELMYLPGGTIRKERFEVTPAGYRMGRETLRSCTELLKF 91
            GT+AEV+E L+ EK   PKRIPY   ++  HPG F L Y+       E   + P G++  ++  ++  +L+ +
Sbjct:   47 GTKAEVDELLKLEKEEYPKRIPYGFGISYEHPGTFILSYIRSTNPHHEFIGIHPKGFKFRKQIFQNVEQLVAY 119          
BLAST of mRNA_P-wetherbeei_contig58384.1.1 vs. uniprot
Match: S8CXC7_9LAMI (S1 motif domain-containing protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CXC7_9LAMI)

HSP 1 Score: 50.8 bits (120), Expect = 5.020e-5
Identity = 24/77 (31.17%), Postives = 40/77 (51.95%), Query Frame = 0
Query:   19 GTEAEVEETLRDEKGNEPKRIPYYLLMAPGHPGYFELMYLPGGTIRKERFEVTPAGYRMGRETLRSCTELLKFFKEN 95
            G++AE++E LR+EKG  P RI Y   ++  HPG F L Y+       E   + P G++  +        L+ +F+ +
Sbjct: 1341 GSKAEIDERLREEKGENPMRILYCFGVSHEHPGNFILTYIRSSNPHHEYVGLDPKGFKFRKRMFEDIDRLVSYFQRH 1417          
BLAST of mRNA_P-wetherbeei_contig58384.1.1 vs. uniprot
Match: A0A834TV69_9FABA (Transcription elongation factor SPT6-like protein isoform X1 n=1 Tax=Senna tora TaxID=362788 RepID=A0A834TV69_9FABA)

HSP 1 Score: 50.8 bits (120), Expect = 5.060e-5
Identity = 24/77 (31.17%), Postives = 44/77 (57.14%), Query Frame = 0
Query:   19 GTEAEVEETLRDEKGNEPKRIPYYLLMAPGHPGYFELMYLPGGTIRKERFEVTPAGYRMGRETLRSCTELLKFFKEN 95
            G++AEV++ L+ EK   PKRI Y   ++  HPG F L Y+    +R E   + P G++  ++   +  +L+ +F+ +
Sbjct: 1197 GSKAEVDQLLKLEKEEYPKRIVYGFAISFEHPGTFILSYIRSTNLRHEFIGIHPKGFKFRKQIFENVEQLIAYFQNH 1273          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58384.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A0J7YPP3_BETVV2.540e-1334.02SH2_2 domain-containing protein (Fragment) n=1 Tax... [more]
A0A151ZDL6_9MYCE1.060e-1037.97Transcription elongation factor spt6 n=1 Tax=Tiegh... [more]
UPI00092F16DD1.070e-532.47transcription elongation factor SPT6-like isoform ... [more]
A0A4P1RLE1_LUPAN1.070e-532.47S1 motif domain-containing protein n=15 Tax=Lupinu... [more]
UPI00128FC3EC3.150e-534.25hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
S8CXC7_9LAMI5.020e-531.17S1 motif domain-containing protein (Fragment) n=1 ... [more]
A0A834TV69_9FABA5.060e-531.17Transcription elongation factor SPT6-like protein ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035420Spt6, SH2 domainPFAMPF14633SH2_2coord: 10..94
e-value: 3.5E-16
score: 59.2
IPR036860SH2 domain superfamilyGENE3D3.30.505.10SH2 domaincoord: 10..106
e-value: 1.6E-19
score: 71.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
IPR017072Transcription elongation factor Spt6PANTHERPTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6coord: 16..102
IPR035018Spt6, SH2 domain, C terminusCDDcd09928SH2_Cterm_SPT6_likecoord: 16..96
e-value: 2.47927E-22
score: 81.1173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58384contigP-wetherbeei_contig58384:84..401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58384.1.1mRNA_P-wetherbeei_contig58384.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig58384 84..401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig58384.1.1 ID=prot_P-wetherbeei_contig58384.1.1|Name=mRNA_P-wetherbeei_contig58384.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp
MPLRSPLPPLTTETCYPPGTEAEVEETLRDEKGNEPKRIPYYLLMAPGHP
GYFELMYLPGGTIRKERFEVTPAGYRMGRETLRSCTELLKFFKENAARQQ
SSSSRR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035420Spt6_SH2
IPR036860SH2_dom_sf
IPR017072TF_Spt6
IPR035018Spt6_SH2_C